RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 ZRANB1Q9UGI0 708 aa12.64□□□□□ -0.39
PSEN1-204ENST00000394164 ANKRD36BQ8N2N9 1353 aa12.64□□□□□ -0.39
PSEN1-204ENST00000394164 HMOX1P09601 288 aa12.63□□□□□ -0.39
PSEN1-204ENST00000394164 TXNDC2Q86VQ3 553 aa12.63□□□□□ -0.39
PSEN1-204ENST00000394164 NEO1Q92859 1461 aa12.63□□□□□ -0.39
PSEN1-204ENST00000394164 NEXMIFQ5QGS0 1516 aa12.63□□□□□ -0.39
PSEN1-204ENST00000394164 BECN1Q14457 450 aa12.63□□□□□ -0.39
PSEN1-204ENST00000394164 ESF1Q9H501 851 aaKnown RBP12.63□□□□□ -0.39
PSEN1-204ENST00000394164 TERF2IPQ9NYB0 399 aa12.63□□□□□ -0.39
PSEN1-204ENST00000394164 MYO5BQ9ULV0 1848 aa12.63□□□□□ -0.39
PSEN1-204ENST00000394164 MAPK8IP3Q9UPT6 1336 aa12.63□□□□□ -0.39
PSEN1-204ENST00000394164 CFAP74Q9C0B2 1584 aa12.62□□□□□ -0.39
PSEN1-204ENST00000394164 SOX12O15370 315 aa12.62□□□□□ -0.39
PSEN1-204ENST00000394164 USP19O94966 1318 aa12.62□□□□□ -0.39
PSEN1-204ENST00000394164 EXOSC9Q06265 439 aaKnown RBP12.62□□□□□ -0.39
PSEN1-204ENST00000394164 HDGFL2Q7Z4V5 671 aaPredicted RBP12.62□□□□□ -0.39
PSEN1-204ENST00000394164 SETBP1Q9Y6X0 1596 aa12.61□□□□□ -0.39
PSEN1-204ENST00000394164 THUMPD2Q9BTF0 503 aaKnown RBP12.61□□□□□ -0.39
PSEN1-204ENST00000394164 ELL2O00472 640 aaPredicted RBP12.61□□□□□ -0.39
PSEN1-204ENST00000394164 RIPK4P57078 832 aa12.61□□□□□ -0.39
PSEN1-204ENST00000394164 PCDHB15Q9Y5E8 787 aa12.61□□□□□ -0.39
PSEN1-204ENST00000394164 ERBB4Q15303 1308 aa12.61□□□□□ -0.39
PSEN1-204ENST00000394164 PIK3C2BO00750 1634 aa12.6□□□□□ -0.39
PSEN1-204ENST00000394164 YTHDC2Q9H6S0 1430 aaKnown RBP12.6□□□□□ -0.39
PSEN1-204ENST00000394164 FTSJ3Q8IY81 847 aaKnown RBP12.6□□□□□ -0.39
PSEN1-204ENST00000394164 SMC4Q9NTJ3 1288 aa12.6□□□□□ -0.39
PSEN1-204ENST00000394164 NEURL4Q96JN8 1562 aa12.59□□□□□ -0.39
PSEN1-204ENST00000394164 TMPOP42166 694 aaKnown RBP12.59□□□□□ -0.39
PSEN1-204ENST00000394164 MYO3AQ8NEV4 1616 aa12.59□□□□□ -0.39
PSEN1-204ENST00000394164 DIAPH1O60610 1272 aaKnown RBP12.59□□□□□ -0.39
PSEN1-204ENST00000394164 RBM10P98175 930 aaKnown RBP12.59□□□□□ -0.39
PSEN1-204ENST00000394164 MYH16Q9H6N6 1097 aa12.59□□□□□ -0.39
PSEN1-204ENST00000394164 EMILIN1Q9Y6C2 1016 aa12.58□□□□□ -0.4
PSEN1-204ENST00000394164 NME9Q86XW9 330 aa12.58□□□□□ -0.4
PSEN1-204ENST00000394164 ARHGEF28Q8N1W1 1705 aaKnown RBP12.58□□□□□ -0.4
PSEN1-204ENST00000394164 PDE3AQ14432 1141 aa12.57□□□□□ -0.4
PSEN1-204ENST00000394164 WDR63Q8IWG1 891 aa12.57□□□□□ -0.4
PSEN1-204ENST00000394164 RICTORQ6R327 1708 aa12.57□□□□□ -0.4
PSEN1-204ENST00000394164 ESPNB1AK53 854 aa12.57□□□□□ -0.4
PSEN1-204ENST00000394164 PRKAR2BP31323 418 aa12.57□□□□□ -0.4
PSEN1-204ENST00000394164 RRS1Q15050 365 aaKnown RBP12.57□□□□□ -0.4
PSEN1-204ENST00000394164 ITPRIPQ8IWB1 547 aa12.57□□□□□ -0.4
PSEN1-204ENST00000394164 SHPRHQ149N8 1683 aa12.57□□□□□ -0.4
PSEN1-204ENST00000394164 TRIM35Q9UPQ4 493 aa12.56□□□□□ -0.4
PSEN1-204ENST00000394164 TBC1D2Q9BYX2 928 aa12.56□□□□□ -0.4
PSEN1-204ENST00000394164 ZC3H13Q5T200 1668 aaKnown RBP12.56□□□□□ -0.4
PSEN1-204ENST00000394164 TRAK2O60296 914 aa12.56□□□□□ -0.4
PSEN1-204ENST00000394164 SSH1Q8WYL5 1049 aa12.56□□□□□ -0.4
PSEN1-204ENST00000394164 TRIM44Q96DX7 344 aaPredicted RBP12.56□□□□□ -0.4
PSEN1-204ENST00000394164 ANTXR1Q9H6X2 564 aa12.56□□□□□ -0.4
PSEN1-204ENST00000394164 MCM4P33991 863 aa12.55□□□□□ -0.4
PSEN1-204ENST00000394164 CEBPAP49715 358 aaPredicted RBP12.55□□□□□ -0.4
PSEN1-204ENST00000394164 PHACTR3Q96KR7 559 aa12.55□□□□□ -0.4
PSEN1-204ENST00000394164 ABCC11Q96J66 1382 aa12.55□□□□□ -0.4
PSEN1-204ENST00000394164 FSD2A1L4K1 749 aa12.55□□□□□ -0.4
PSEN1-204ENST00000394164 PLEKHF1Q96S99 279 aa12.55□□□□□ -0.4
PSEN1-204ENST00000394164 PTPRMP28827 1452 aa12.54□□□□□ -0.4
PSEN1-204ENST00000394164 NOB1Q9ULX3 412 aaKnown RBP12.54□□□□□ -0.4
PSEN1-204ENST00000394164 ARHGAP31Q2M1Z3 1444 aa12.54□□□□□ -0.4
PSEN1-204ENST00000394164 NGEFQ8N5V2 710 aa12.54□□□□□ -0.4
PSEN1-204ENST00000394164 PHF23Q9BUL5 403 aaPredicted RBP12.54□□□□□ -0.4
PSEN1-204ENST00000394164 ATAD2Q6PL18 1390 aa12.54□□□□□ -0.4
PSEN1-204ENST00000394164 ZKSCAN2Q63HK3 967 aa12.54□□□□□ -0.4
PSEN1-204ENST00000394164 POLKQ9UBT6 870 aa12.54□□□□□ -0.4
PSEN1-204ENST00000394164 DZIP1LQ8IYY4 767 aaKnown RBP12.53□□□□□ -0.4
PSEN1-204ENST00000394164 GRPEL1Q9HAV7 217 aa12.53□□□□□ -0.4
PSEN1-204ENST00000394164 PDZRN3Q9UPQ7 1066 aa12.53□□□□□ -0.4
PSEN1-204ENST00000394164 PREX1Q8TCU6 1659 aa12.53□□□□□ -0.4
PSEN1-204ENST00000394164 TMEM131LA2VDJ0 1609 aa12.52□□□□□ -0.4
PSEN1-204ENST00000394164 TRIM27P14373 513 aa12.52□□□□□ -0.4
PSEN1-204ENST00000394164 DCTN1Q14203 1278 aa12.52□□□□□ -0.4
PSEN1-204ENST00000394164 METP08581 1390 aa12.52□□□□□ -0.41
PSEN1-204ENST00000394164 SLC26A8Q96RN1 970 aa12.52□□□□□ -0.41
PSEN1-204ENST00000394164 UPF2Q9HAU5 1272 aaKnown RBP12.52□□□□□ -0.41
PSEN1-204ENST00000394164 RIMS2Q9UQ26 1411 aa12.52□□□□□ -0.41
PSEN1-204ENST00000394164 IQSEC2Q5JU85 1478 aa12.52□□□□□ -0.41
PSEN1-204ENST00000394164 FAM83GA6ND36 823 aa12.51□□□□□ -0.41
PSEN1-204ENST00000394164 KIAA1211Q6ZU35 1233 aa12.51□□□□□ -0.41
PSEN1-204ENST00000394164 ALKQ9UM73 1620 aa12.51□□□□□ -0.41
PSEN1-204ENST00000394164 MRE11P49959 708 aa12.51□□□□□ -0.41
PSEN1-204ENST00000394164 CD163L1Q9NR16 1453 aa12.51□□□□□ -0.41
PSEN1-204ENST00000394164 NSD2O96028 1365 aa12.51□□□□□ -0.41
PSEN1-204ENST00000394164 MVPQ14764 893 aaKnown RBP12.51□□□□□ -0.41
PSEN1-204ENST00000394164 NUDT16Q96DE0 195 aaKnown RBP12.51□□□□□ -0.41
PSEN1-204ENST00000394164 CCDC27Q2M243 656 aa12.5□□□□□ -0.41
PSEN1-204ENST00000394164 C1orf115Q9H7X2 142 aa12.5□□□□□ -0.41
PSEN1-204ENST00000394164 TMEM57Q8N5G2 664 aa12.5□□□□□ -0.41
PSEN1-204ENST00000394164 PUS7Q96PZ0 661 aaKnown RBP12.5□□□□□ -0.41
PSEN1-204ENST00000394164 WASLO00401 505 aaPredicted RBP12.49□□□□□ -0.41
PSEN1-204ENST00000394164 FAM13BQ9NYF5 915 aa12.49□□□□□ -0.41
PSEN1-204ENST00000394164 CLTCQ00610 1675 aaKnown RBP12.49□□□□□ -0.41
PSEN1-204ENST00000394164 TSPYL6Q8N831 410 aa12.48□□□□□ -0.41
PSEN1-204ENST00000394164 PMFBP1Q8TBY8 1022 aa12.48□□□□□ -0.41
PSEN1-204ENST00000394164 RWDD1Q9H446 243 aaPredicted RBP12.48□□□□□ -0.41
PSEN1-204ENST00000394164 PDCL3Q9H2J4 239 aa12.48□□□□□ -0.41
PSEN1-204ENST00000394164 RIMBP3CA6NJZ7 1639 aa12.48□□□□□ -0.41
PSEN1-204ENST00000394164 RIMBP3BA6NNM3 1639 aa12.48□□□□□ -0.41
PSEN1-204ENST00000394164 RIMBP3Q9UFD9 1639 aa12.48□□□□□ -0.41
PSEN1-204ENST00000394164 ZFYVE9O95405 1425 aa12.48□□□□□ -0.41
PSEN1-204ENST00000394164 MFAP1P55081 439 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms