RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 WWC3Q9ULE0 1092 aa11.18□□□□□ -0.62
CDH11-202ENST00000394156 LARP6Q9BRS8 491 aaKnown RBP11.17□□□□□ -0.62
CDH11-202ENST00000394156 ADGRL1O94910 1474 aa11.17□□□□□ -0.62
CDH11-202ENST00000394156 DDX49Q9Y6V7 483 aaKnown RBP11.17□□□□□ -0.62
CDH11-202ENST00000394156 NCKAP5LQ9HCH0 1330 aa11.17□□□□□ -0.62
CDH11-202ENST00000394156 GOLGA6L6A8MZA4 724 aa11.17□□□□□ -0.62
CDH11-202ENST00000394156 CABP4P57796 275 aa11.17□□□□□ -0.62
CDH11-202ENST00000394156 IL1RAPL2Q9NP60 686 aa11.17□□□□□ -0.62
CDH11-202ENST00000394156 NFXL1Q6ZNB6 911 aa11.17□□□□□ -0.62
CDH11-202ENST00000394156 RRP12Q5JTH9 1297 aaKnown RBP11.16□□□□□ -0.62
CDH11-202ENST00000394156 PNISRQ8TF01 805 aaKnown RBP11.16□□□□□ -0.62
CDH11-202ENST00000394156 F6X3S4 739 aa11.16□□□□□ -0.62
CDH11-202ENST00000394156 GPRASP1Q5JY77 1395 aa11.16□□□□□ -0.62
CDH11-202ENST00000394156 SLC4A8Q2Y0W8 1093 aa11.16□□□□□ -0.62
CDH11-202ENST00000394156 DISP3Q9P2K9 1392 aa11.16□□□□□ -0.62
CDH11-202ENST00000394156 PTPRKQ15262 1439 aa11.16□□□□□ -0.62
CDH11-202ENST00000394156 IDI1Q13907 227 aa11.16□□□□□ -0.62
CDH11-202ENST00000394156 BTBD11A6QL63 1104 aa11.16□□□□□ -0.62
CDH11-202ENST00000394156 PIBF1Q8WXW3 757 aa11.16□□□□□ -0.62
CDH11-202ENST00000394156 ZNF530Q6P9A1 599 aaPredicted RBP11.16□□□□□ -0.62
CDH11-202ENST00000394156 MPRIPQ6WCQ1 1025 aa11.15□□□□□ -0.62
CDH11-202ENST00000394156 KIAA0586Q9BVV6 1533 aa11.15□□□□□ -0.62
CDH11-202ENST00000394156 C22orf23Q9BZE7 217 aa11.15□□□□□ -0.63
CDH11-202ENST00000394156 HDGFL1Q5TGJ6 251 aa11.14□□□□□ -0.63
CDH11-202ENST00000394156 DDX58O95786 925 aaKnown RBP11.14□□□□□ -0.63
CDH11-202ENST00000394156 TSHZ3Q63HK5 1081 aa11.14□□□□□ -0.63
CDH11-202ENST00000394156 CHRNA2Q15822 529 aa11.14□□□□□ -0.63
CDH11-202ENST00000394156 BRD4O60885 1362 aaPredicted RBP11.14□□□□□ -0.63
CDH11-202ENST00000394156 NOS1P29475 1434 aa11.14□□□□□ -0.63
CDH11-202ENST00000394156 RAPGEF6Q8TEU7 1601 aa11.14□□□□□ -0.63
CDH11-202ENST00000394156 CCDC141Q6ZP82 1450 aa11.14□□□□□ -0.63
CDH11-202ENST00000394156 NUTM1Q86Y26 1132 aa11.13□□□□□ -0.63
CDH11-202ENST00000394156 ANXA1P04083 346 aa11.13□□□□□ -0.63
CDH11-202ENST00000394156 ATP2B1P20020 1258 aa11.13□□□□□ -0.63
CDH11-202ENST00000394156 GLIPR1L2Q4G1C9 344 aa11.13□□□□□ -0.63
CDH11-202ENST00000394156 SETD1BQ9UPS6 1966 aaKnown RBP11.13□□□□□ -0.63
CDH11-202ENST00000394156 THEMISQ8N1K5 641 aaPredicted RBP11.13□□□□□ -0.63
CDH11-202ENST00000394156 PPFIA3O75145 1194 aa11.13□□□□□ -0.63
CDH11-202ENST00000394156 ANKLE2Q86XL3 938 aa11.13□□□□□ -0.63
CDH11-202ENST00000394156 TMEM57Q8N5G2 664 aa11.12□□□□□ -0.63
CDH11-202ENST00000394156 ZNF219Q9P2Y4 722 aaPredicted RBP11.12□□□□□ -0.63
CDH11-202ENST00000394156 FAM135AQ9P2D6 1515 aa11.12□□□□□ -0.63
CDH11-202ENST00000394156 CABLES1Q8TDN4 633 aa11.12□□□□□ -0.63
CDH11-202ENST00000394156 API5Q9BZZ5 524 aaKnown RBP11.12□□□□□ -0.63
CDH11-202ENST00000394156 AMOTL2Q9Y2J4 779 aa11.12□□□□□ -0.63
CDH11-202ENST00000394156 CCDC30Q5VVM6 783 aa11.12□□□□□ -0.63
CDH11-202ENST00000394156 FSD1Q9BTV5 496 aa11.12□□□□□ -0.63
CDH11-202ENST00000394156 PBRM1Q86U86 1689 aa11.12□□□□□ -0.63
CDH11-202ENST00000394156 FANCAO15360 1455 aa11.11□□□□□ -0.63
CDH11-202ENST00000394156 SYCP2Q9BX26 1530 aa11.11□□□□□ -0.63
CDH11-202ENST00000394156 TRIM34Q9BYJ4 488 aa11.11□□□□□ -0.63
CDH11-202ENST00000394156 FKBP4Q02790 459 aaKnown RBP eCLIP11.11□□□□□ -0.63
CDH11-202ENST00000394156 ZNF592Q92610 1267 aa11.11□□□□□ -0.63
CDH11-202ENST00000394156 CNNM1Q9NRU3 951 aa11.11□□□□□ -0.63
CDH11-202ENST00000394156 EXOC6BQ9Y2D4 811 aa11.11□□□□□ -0.63
CDH11-202ENST00000394156 TATP17735 454 aaPredicted RBP11.11□□□□□ -0.63
CDH11-202ENST00000394156 KIF6Q6ZMV9 814 aa11.11□□□□□ -0.63
CDH11-202ENST00000394156 RNF214Q8ND24 703 aa11.11□□□□□ -0.63
CDH11-202ENST00000394156 NOC3LQ8WTT2 800 aaKnown RBP11.11□□□□□ -0.63
CDH11-202ENST00000394156 TMPOP42166 694 aaKnown RBP11.1□□□□□ -0.63
CDH11-202ENST00000394156 ATP2B2Q01814 1243 aa11.1□□□□□ -0.63
CDH11-202ENST00000394156 PRDM11Q9NQV5 511 aa11.1□□□□□ -0.63
CDH11-202ENST00000394156 PLEKHO1Q53GL0 409 aaPredicted RBP11.1□□□□□ -0.63
CDH11-202ENST00000394156 AKAP17AQ02040 695 aaKnown RBP11.1□□□□□ -0.63
CDH11-202ENST00000394156 ANKRD30BQ9BXX2 1392 aa11.09□□□□□ -0.63
CDH11-202ENST00000394156 CHAF1AQ13111 956 aaPredicted RBP11.09□□□□□ -0.63
CDH11-202ENST00000394156 DDX17Q92841 729 aaKnown RBP11.09□□□□□ -0.63
CDH11-202ENST00000394156 CWC27Q6UX04 472 aaKnown RBP11.09□□□□□ -0.63
CDH11-202ENST00000394156 TPD52L1Q16890 204 aaPredicted RBP11.08□□□□□ -0.63
CDH11-202ENST00000394156 CCAR2Q8N163 923 aaKnown RBP11.08□□□□□ -0.64
CDH11-202ENST00000394156 TNNQ9UQP3 1299 aa11.08□□□□□ -0.64
CDH11-202ENST00000394156 INTS3Q68E01 1043 aaKnown RBP11.08□□□□□ -0.64
CDH11-202ENST00000394156 BICD2Q8TD16 824 aa11.08□□□□□ -0.64
CDH11-202ENST00000394156 HSPA2P54652 639 aa11.08□□□□□ -0.64
CDH11-202ENST00000394156 TTC39AQ5SRH9 613 aa11.08□□□□□ -0.64
CDH11-202ENST00000394156 SMG6Q86US8 1419 aaKnown RBP11.07□□□□□ -0.64
CDH11-202ENST00000394156 CPLX1O14810 134 aa11.07□□□□□ -0.64
CDH11-202ENST00000394156 PHF14O94880 888 aa11.07□□□□□ -0.64
CDH11-202ENST00000394156 GAS2L2Q8NHY3 880 aa11.07□□□□□ -0.64
CDH11-202ENST00000394156 FBXO3Q9UK99 471 aa11.07□□□□□ -0.64
CDH11-202ENST00000394156 ACSBG1Q96GR2 724 aa11.07□□□□□ -0.64
CDH11-202ENST00000394156 NOL10Q9BSC4 688 aaKnown RBP11.06□□□□□ -0.64
CDH11-202ENST00000394156 GNAI2P04899 355 aa11.06□□□□□ -0.64
CDH11-202ENST00000394156 NEK4P51957 841 aa11.06□□□□□ -0.64
CDH11-202ENST00000394156 SMC3Q9UQE7 1217 aa11.06□□□□□ -0.64
CDH11-202ENST00000394156 GPTP24298 496 aa11.06□□□□□ -0.64
CDH11-202ENST00000394156 NFKBIBQ15653 356 aa11.06□□□□□ -0.64
CDH11-202ENST00000394156 SYNE3Q6ZMZ3 975 aa11.06□□□□□ -0.64
CDH11-202ENST00000394156 FANCIQ9NVI1 1328 aa11.06□□□□□ -0.64
CDH11-202ENST00000394156 KIAA2012Q0VF49 1180 aa11.05□□□□□ -0.64
CDH11-202ENST00000394156 AACSQ86V21 672 aa11.05□□□□□ -0.64
CDH11-202ENST00000394156 SRGAP3O43295 1099 aa11.05□□□□□ -0.64
CDH11-202ENST00000394156 ZKSCAN1P17029 563 aaPredicted RBP11.05□□□□□ -0.64
CDH11-202ENST00000394156 MYD88Q99836 296 aa11.05□□□□□ -0.64
CDH11-202ENST00000394156 IKQ13123 557 aaPredicted RBP11.05□□□□□ -0.64
CDH11-202ENST00000394156 DUSP27Q5VZP5 1158 aa11.05□□□□□ -0.64
CDH11-202ENST00000394156 SYAP1Q96A49 352 aaPredicted RBP11.05□□□□□ -0.64
CDH11-202ENST00000394156 CFAP44Q96MT7 982 aa11.05□□□□□ -0.64
CDH11-202ENST00000394156 ATP10BO94823 1461 aa11.05□□□□□ -0.64
CDH11-202ENST00000394156 GSE1Q14687 1217 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms