RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 CRYBG1Q9Y4K1 1723 aa25.46■■□□□ 1.67
SNRPA1-202ENST00000394082 NUDT16Q96DE0 195 aaKnown RBP25.46■■□□□ 1.67
SNRPA1-202ENST00000394082 CCDC9Q9Y3X0 531 aaKnown RBP25.46■■□□□ 1.67
SNRPA1-202ENST00000394082 KRT27Q7Z3Y8 459 aa25.45■■□□□ 1.66
SNRPA1-202ENST00000394082 BTG4Q9NY30 223 aa25.45■■□□□ 1.66
SNRPA1-202ENST00000394082 PLEKHG5O94827 1062 aa25.44■■□□□ 1.66
SNRPA1-202ENST00000394082 POLR3AO14802 1390 aaPredicted RBP25.44■■□□□ 1.66
SNRPA1-202ENST00000394082 PAK3O75914 559 aaPredicted RBP25.41■■□□□ 1.66
SNRPA1-202ENST00000394082 SF3B2Q13435 895 aaKnown RBP25.41■■□□□ 1.66
SNRPA1-202ENST00000394082 CDK19Q9BWU1 502 aa25.41■■□□□ 1.66
SNRPA1-202ENST00000394082 CCDC61Q9Y6R9 512 aa25.41■■□□□ 1.66
SNRPA1-202ENST00000394082 SPATA31A5Q5VU36 1347 aa25.39■■□□□ 1.66
SNRPA1-202ENST00000394082 SPATA31A7Q8IWB4 1347 aa25.39■■□□□ 1.66
SNRPA1-202ENST00000394082 TOPAZ1Q8N9V7 1692 aa25.39■■□□□ 1.66
SNRPA1-202ENST00000394082 PLEKHG3A1L390 1219 aa25.39■■□□□ 1.66
SNRPA1-202ENST00000394082 FAM98CQ17RN3 349 aaKnown RBP25.37■■□□□ 1.65
SNRPA1-202ENST00000394082 PRDM11Q9NQV5 511 aa25.37■■□□□ 1.65
SNRPA1-202ENST00000394082 NBPF8Q3BBV2 869 aa25.35■■□□□ 1.65
SNRPA1-202ENST00000394082 ACEP12821 1306 aa25.35■■□□□ 1.65
SNRPA1-202ENST00000394082 DEFB132Q7Z7B7 95 aa25.34■■□□□ 1.65
SNRPA1-202ENST00000394082 PHRF1Q9P1Y6 1649 aaKnown RBP25.34■■□□□ 1.65
SNRPA1-202ENST00000394082 KIAA0232Q92628 1395 aa25.33■■□□□ 1.65
SNRPA1-202ENST00000394082 NBPF1Q3BBV0 1214 aa25.33■■□□□ 1.65
SNRPA1-202ENST00000394082 THSD7AQ9UPZ6 1657 aa25.32■■□□□ 1.64
SNRPA1-202ENST00000394082 A0A0G2JS52 829 aa25.32■■□□□ 1.64
SNRPA1-202ENST00000394082 MYT1Q01538 1121 aa25.32■■□□□ 1.64
SNRPA1-202ENST00000394082 BRD4O60885 1362 aaPredicted RBP25.31■■□□□ 1.64
SNRPA1-202ENST00000394082 BAG6P46379 1132 aa25.3■■□□□ 1.64
SNRPA1-202ENST00000394082 SPATA31A1Q5TZJ5 1347 aa25.3■■□□□ 1.64
SNRPA1-202ENST00000394082 CENPJQ9HC77 1338 aaPredicted RBP25.3■■□□□ 1.64
SNRPA1-202ENST00000394082 CPDO75976 1380 aa25.28■■□□□ 1.64
SNRPA1-202ENST00000394082 USP19O94966 1318 aa25.27■■□□□ 1.64
SNRPA1-202ENST00000394082 ABTB2Q8N961 1025 aa25.26■■□□□ 1.63
SNRPA1-202ENST00000394082 RGPD1P0DJD0 1748 aa25.26■■□□□ 1.63
SNRPA1-202ENST00000394082 ZC3H6P61129 1189 aaKnown RBP25.25■■□□□ 1.63
SNRPA1-202ENST00000394082 CHRNA2Q15822 529 aa25.25■■□□□ 1.63
SNRPA1-202ENST00000394082 DISP2A7MBM2 1401 aa25.25■■□□□ 1.63
SNRPA1-202ENST00000394082 PPIP5K1Q6PFW1 1433 aa25.25■■□□□ 1.63
SNRPA1-202ENST00000394082 NRKQ7Z2Y5 1582 aa25.25■■□□□ 1.63
SNRPA1-202ENST00000394082 SRPK2P78362 688 aaKnown RBP25.24■■□□□ 1.63
SNRPA1-202ENST00000394082 BARGINQ6ZT62 677 aa25.23■■□□□ 1.63
SNRPA1-202ENST00000394082 NLRP13Q86W25 1043 aa25.23■■□□□ 1.63
SNRPA1-202ENST00000394082 NUTM2GQ5VZR2 741 aa25.22■■□□□ 1.63
SNRPA1-202ENST00000394082 SSH2Q76I76 1423 aa25.21■■□□□ 1.63
SNRPA1-202ENST00000394082 LMO7Q8WWI1 1683 aa25.21■■□□□ 1.63
SNRPA1-202ENST00000394082 QRICH2Q9H0J4 1663 aa25.21■■□□□ 1.63
SNRPA1-202ENST00000394082 L3MBTL2Q969R5 705 aa25.21■■□□□ 1.63
SNRPA1-202ENST00000394082 STRN4Q9NRL3 753 aa25.2■■□□□ 1.62
SNRPA1-202ENST00000394082 CAMTA1Q9Y6Y1 1673 aa25.2■■□□□ 1.62
SNRPA1-202ENST00000394082 GCP02774 474 aa25.19■■□□□ 1.62
SNRPA1-202ENST00000394082 EVA1CP58658 441 aa25.19■■□□□ 1.62
SNRPA1-202ENST00000394082 FAM196AQ6ZSG2 479 aa25.19■■□□□ 1.62
SNRPA1-202ENST00000394082 CABP2Q9NPB3 220 aa25.19■■□□□ 1.62
SNRPA1-202ENST00000394082 LRP5O75197 1615 aa25.19■■□□□ 1.62
SNRPA1-202ENST00000394082 THRAP3Q9Y2W1 955 aaKnown RBP25.18■■□□□ 1.62
SNRPA1-202ENST00000394082 USP6P35125 1406 aa25.17■■□□□ 1.62
SNRPA1-202ENST00000394082 FAM182BQ5T319 152 aa25.16■■□□□ 1.62
SNRPA1-202ENST00000394082 TNS1Q9HBL0 1735 aaKnown RBP25.16■■□□□ 1.62
SNRPA1-202ENST00000394082 TRPM1Q7Z4N2 1603 aa25.15■■□□□ 1.62
SNRPA1-202ENST00000394082 EN1Q05925 392 aaPredicted RBP25.15■■□□□ 1.62
SNRPA1-202ENST00000394082 CABP1Q9NZU7 370 aa25.15■■□□□ 1.62
SNRPA1-202ENST00000394082 EVC2Q86UK5 1308 aa25.14■■□□□ 1.62
SNRPA1-202ENST00000394082 TCP11L2Q8N4U5 519 aa25.14■■□□□ 1.62
SNRPA1-202ENST00000394082 PARD3Q8TEW0 1356 aa25.14■■□□□ 1.61
SNRPA1-202ENST00000394082 LARP1Q6PKG0 1096 aaKnown RBP25.13■■□□□ 1.61
SNRPA1-202ENST00000394082 COL5A2P05997 1499 aaPredicted RBP25.12■■□□□ 1.61
SNRPA1-202ENST00000394082 SLIT3O75094 1523 aa25.12■■□□□ 1.61
SNRPA1-202ENST00000394082 PDE3BQ13370 1112 aa25.11■■□□□ 1.61
SNRPA1-202ENST00000394082 USP35Q9P2H5 1018 aa25.11■■□□□ 1.61
SNRPA1-202ENST00000394082 AATKQ6ZMQ8 1374 aa25.1■■□□□ 1.61
SNRPA1-202ENST00000394082 C11orf95C9JLR9 678 aaPredicted RBP25.1■■□□□ 1.61
SNRPA1-202ENST00000394082 ZNF692Q9BU19 519 aaPredicted RBP25.1■■□□□ 1.61
SNRPA1-202ENST00000394082 NLRP6P59044 892 aa25.09■■□□□ 1.61
SNRPA1-202ENST00000394082 CAMKK2Q96RR4 588 aa25.09■■□□□ 1.61
SNRPA1-202ENST00000394082 ROCK2O75116 1388 aaKnown RBP25.08■■□□□ 1.61
SNRPA1-202ENST00000394082 TRIM37O94972 964 aa25.08■■□□□ 1.61
SNRPA1-202ENST00000394082 SIN3AQ96ST3 1273 aa25.08■■□□□ 1.61
SNRPA1-202ENST00000394082 CRB1P82279 1406 aa25.08■■□□□ 1.61
SNRPA1-202ENST00000394082 PARP4Q9UKK3 1724 aaKnown RBP25.06■■□□□ 1.6
SNRPA1-202ENST00000394082 PSDA5PKW4 1024 aaPredicted RBP25.06■■□□□ 1.6
SNRPA1-202ENST00000394082 EZH2Q15910 746 aaKnown RBP25.06■■□□□ 1.6
SNRPA1-202ENST00000394082 PIK3C2AO00443 1686 aa25.05■■□□□ 1.6
SNRPA1-202ENST00000394082 SBNO2Q9Y2G9 1366 aa25.04■■□□□ 1.6
SNRPA1-202ENST00000394082 APBA3O96018 575 aa25.03■■□□□ 1.6
SNRPA1-202ENST00000394082 TTC21AQ8NDW8 1320 aa25.03■■□□□ 1.6
SNRPA1-202ENST00000394082 KCNH5Q8NCM2 988 aa25.02■■□□□ 1.6
SNRPA1-202ENST00000394082 CPSF1Q10570 1443 aaKnown RBP25.02■■□□□ 1.6
SNRPA1-202ENST00000394082 COL18A1P39060 1754 aa25.01■■□□□ 1.59
SNRPA1-202ENST00000394082 AKAP12Q02952 1782 aa25.01■■□□□ 1.59
SNRPA1-202ENST00000394082 TTC21BQ7Z4L5 1316 aa25.01■■□□□ 1.59
SNRPA1-202ENST00000394082 NEUROD1Q13562 356 aa25■■□□□ 1.59
SNRPA1-202ENST00000394082 R3HDM1Q15032 1099 aaKnown RBP25■■□□□ 1.59
SNRPA1-202ENST00000394082 RREB1Q92766 1687 aa24.99■■□□□ 1.59
SNRPA1-202ENST00000394082 ARHGEF25Q86VW2 580 aa24.98■■□□□ 1.59
SNRPA1-202ENST00000394082 WDR17Q8IZU2 1322 aa24.97■■□□□ 1.59
SNRPA1-202ENST00000394082 CDCA7Q9BWT1 371 aaPredicted RBP24.97■■□□□ 1.59
SNRPA1-202ENST00000394082 OVOS2A0A0G2JMS6 1433 aa24.96■■□□□ 1.59
SNRPA1-202ENST00000394082 OVOS2A0A0J9YW53 1432 aa24.96■■□□□ 1.59
SNRPA1-202ENST00000394082 OVOS2Q6IE36 1432 aa24.96■■□□□ 1.59
SNRPA1-202ENST00000394082 PEAK1Q9H792 1746 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms