RNA–Protein interactions for RNA: ENST00000393572.5

FAM3A-205, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2 BASIC

Gene FAM3A, Length 1,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-205ENST00000393572 ACEP12821 1306 aa24.96■■□□□ 1.59
FAM3A-205ENST00000393572 EVC2Q86UK5 1308 aa24.96■■□□□ 1.59
FAM3A-205ENST00000393572 ABCA3Q99758 1704 aa24.96■■□□□ 1.59
FAM3A-205ENST00000393572 NBPF8Q3BBV2 869 aa24.96■■□□□ 1.59
FAM3A-205ENST00000393572 BRD4O60885 1362 aaPredicted RBP24.95■■□□□ 1.59
FAM3A-205ENST00000393572 NWD2Q9ULI1 1742 aa24.95■■□□□ 1.58
FAM3A-205ENST00000393572 PPIP5K1Q6PFW1 1433 aa24.93■■□□□ 1.58
FAM3A-205ENST00000393572 ATAD2Q6PL18 1390 aa24.93■■□□□ 1.58
FAM3A-205ENST00000393572 PLEKHG5O94827 1062 aa24.92■■□□□ 1.58
FAM3A-205ENST00000393572 VPS72Q15906 364 aa24.92■■□□□ 1.58
FAM3A-205ENST00000393572 CABP2Q9NPB3 220 aa24.91■■□□□ 1.58
FAM3A-205ENST00000393572 FAM83GA6ND36 823 aa24.9■■□□□ 1.58
FAM3A-205ENST00000393572 RALGAPBQ86X10 1494 aa24.89■■□□□ 1.57
FAM3A-205ENST00000393572 PLCH1Q4KWH8 1693 aa24.88■■□□□ 1.57
FAM3A-205ENST00000393572 CARD11Q9BXL7 1154 aa24.88■■□□□ 1.57
FAM3A-205ENST00000393572 COL14A1Q05707 1796 aaKnown RBP24.88■■□□□ 1.57
FAM3A-205ENST00000393572 SBNO2Q9Y2G9 1366 aa24.86■■□□□ 1.57
FAM3A-205ENST00000393572 ABTB2Q8N961 1025 aa24.86■■□□□ 1.57
FAM3A-205ENST00000393572 PRDM11Q9NQV5 511 aa24.85■■□□□ 1.57
FAM3A-205ENST00000393572 BTG4Q9NY30 223 aa24.85■■□□□ 1.57
FAM3A-205ENST00000393572 CCDC9Q9Y3X0 531 aaKnown RBP24.85■■□□□ 1.57
FAM3A-205ENST00000393572 NLRP13Q86W25 1043 aa24.84■■□□□ 1.57
FAM3A-205ENST00000393572 CABP1Q9NZU7 370 aa24.84■■□□□ 1.57
FAM3A-205ENST00000393572 CRYBG1Q9Y4K1 1723 aa24.83■■□□□ 1.57
FAM3A-205ENST00000393572 ZNF692Q9BU19 519 aaPredicted RBP24.83■■□□□ 1.57
FAM3A-205ENST00000393572 GLI3P10071 1580 aa24.83■■□□□ 1.57
FAM3A-205ENST00000393572 SLC24A1O60721 1099 aa24.82■■□□□ 1.56
FAM3A-205ENST00000393572 CCDC125Q86Z20 511 aa24.82■■□□□ 1.56
FAM3A-205ENST00000393572 ONECUT3O60422 494 aaPredicted RBP24.81■■□□□ 1.56
FAM3A-205ENST00000393572 USP6P35125 1406 aa24.8■■□□□ 1.56
FAM3A-205ENST00000393572 USP19O94966 1318 aa24.79■■□□□ 1.56
FAM3A-205ENST00000393572 KIAA0232Q92628 1395 aa24.79■■□□□ 1.56
FAM3A-205ENST00000393572 PHRF1Q9P1Y6 1649 aaKnown RBP24.79■■□□□ 1.56
FAM3A-205ENST00000393572 NRAPQ86VF7 1730 aa24.78■■□□□ 1.56
FAM3A-205ENST00000393572 NUTM2GQ5VZR2 741 aa24.78■■□□□ 1.56
FAM3A-205ENST00000393572 SEPT12Q8IYM1 358 aa24.77■■□□□ 1.56
FAM3A-205ENST00000393572 CLSPNQ9HAW4 1339 aa24.77■■□□□ 1.56
FAM3A-205ENST00000393572 CPDO75976 1380 aa24.76■■□□□ 1.55
FAM3A-205ENST00000393572 ZC3H6P61129 1189 aaKnown RBP24.75■■□□□ 1.55
FAM3A-205ENST00000393572 PUS7Q96PZ0 661 aaKnown RBP24.75■■□□□ 1.55
FAM3A-205ENST00000393572 TIMELESSQ9UNS1 1208 aa24.74■■□□□ 1.55
FAM3A-205ENST00000393572 SPATA31A5Q5VU36 1347 aa24.73■■□□□ 1.55
FAM3A-205ENST00000393572 SPATA31A7Q8IWB4 1347 aa24.73■■□□□ 1.55
FAM3A-205ENST00000393572 GCP02774 474 aa24.73■■□□□ 1.55
FAM3A-205ENST00000393572 SSH2Q76I76 1423 aa24.72■■□□□ 1.55
FAM3A-205ENST00000393572 TTC21AQ8NDW8 1320 aa24.72■■□□□ 1.55
FAM3A-205ENST00000393572 NLRP6P59044 892 aa24.72■■□□□ 1.55
FAM3A-205ENST00000393572 NRKQ7Z2Y5 1582 aa24.71■■□□□ 1.55
FAM3A-205ENST00000393572 A0A0G2JS52 829 aa24.71■■□□□ 1.55
FAM3A-205ENST00000393572 MYT1Q01538 1121 aa24.71■■□□□ 1.55
FAM3A-205ENST00000393572 KRT27Q7Z3Y8 459 aa24.71■■□□□ 1.55
FAM3A-205ENST00000393572 EVA1CP58658 441 aa24.7■■□□□ 1.54
FAM3A-205ENST00000393572 CHRNA2Q15822 529 aa24.7■■□□□ 1.54
FAM3A-205ENST00000393572 CPSF1Q10570 1443 aaKnown RBP24.69■■□□□ 1.54
FAM3A-205ENST00000393572 FAM98CQ17RN3 349 aaKnown RBP24.69■■□□□ 1.54
FAM3A-205ENST00000393572 TTC21BQ7Z4L5 1316 aa24.68■■□□□ 1.54
FAM3A-205ENST00000393572 KCNH5Q8NCM2 988 aa24.68■■□□□ 1.54
FAM3A-205ENST00000393572 KTN1Q86UP2 1357 aaKnown RBP24.67■■□□□ 1.54
FAM3A-205ENST00000393572 AKAP12Q02952 1782 aa24.67■■□□□ 1.54
FAM3A-205ENST00000393572 STRN4Q9NRL3 753 aa24.67■■□□□ 1.54
FAM3A-205ENST00000393572 EP400Q96L91 3159 aa24.66■■□□□ 1.54
FAM3A-205ENST00000393572 SPATA31A1Q5TZJ5 1347 aa24.66■■□□□ 1.54
FAM3A-205ENST00000393572 BRWD3Q6RI45 1802 aa24.66■■□□□ 1.54
FAM3A-205ENST00000393572 SF3B2Q13435 895 aaKnown RBP24.66■■□□□ 1.54
FAM3A-205ENST00000393572 HDGFL2Q7Z4V5 671 aaPredicted RBP24.66■■□□□ 1.54
FAM3A-205ENST00000393572 BLMP54132 1417 aaPredicted RBP24.66■■□□□ 1.54
FAM3A-205ENST00000393572 SLIT3O75094 1523 aa24.66■■□□□ 1.54
FAM3A-205ENST00000393572 NINLQ9Y2I6 1382 aa24.64■■□□□ 1.53
FAM3A-205ENST00000393572 TMC1Q8TDI8 760 aa24.63■■□□□ 1.53
FAM3A-205ENST00000393572 TERF2IPQ9NYB0 399 aa24.63■■□□□ 1.53
FAM3A-205ENST00000393572 PIK3C2AO00443 1686 aa24.62■■□□□ 1.53
FAM3A-205ENST00000393572 ST20-MTHFSA0A0A6YYL1 179 aa24.62■■□□□ 1.53
FAM3A-205ENST00000393572 BARGINQ6ZT62 677 aa24.62■■□□□ 1.53
FAM3A-205ENST00000393572 THRAP3Q9Y2W1 955 aaKnown RBP24.62■■□□□ 1.53
FAM3A-205ENST00000393572 AATKQ6ZMQ8 1374 aa24.62■■□□□ 1.53
FAM3A-205ENST00000393572 LMO7Q8WWI1 1683 aa24.62■■□□□ 1.53
FAM3A-205ENST00000393572 PCGF6Q9BYE7 350 aa24.61■■□□□ 1.53
FAM3A-205ENST00000393572 CAMTA1Q9Y6Y1 1673 aa24.61■■□□□ 1.53
FAM3A-205ENST00000393572 TESK2Q96S53 571 aa24.6■■□□□ 1.53
FAM3A-205ENST00000393572 MON2Q7Z3U7 1717 aa24.59■■□□□ 1.53
FAM3A-205ENST00000393572 TCP11L2Q8N4U5 519 aa24.59■■□□□ 1.53
FAM3A-205ENST00000393572 THSD7AQ9UPZ6 1657 aa24.59■■□□□ 1.53
FAM3A-205ENST00000393572 COL5A2P05997 1499 aaPredicted RBP24.58■■□□□ 1.52
FAM3A-205ENST00000393572 LARP1Q6PKG0 1096 aaKnown RBP24.57■■□□□ 1.52
FAM3A-205ENST00000393572 USP31Q70CQ4 1352 aa24.56■■□□□ 1.52
FAM3A-205ENST00000393572 EDC4Q6P2E9 1401 aaKnown RBP24.56■■□□□ 1.52
FAM3A-205ENST00000393572 TMF1P82094 1093 aa24.56■■□□□ 1.52
FAM3A-205ENST00000393572 SLC12A5Q9H2X9 1139 aa24.56■■□□□ 1.52
FAM3A-205ENST00000393572 USP35Q9P2H5 1018 aa24.56■■□□□ 1.52
FAM3A-205ENST00000393572 USP47Q96K76 1375 aa24.55■■□□□ 1.52
FAM3A-205ENST00000393572 ZBTB7CA1YPR0 619 aa24.55■■□□□ 1.52
FAM3A-205ENST00000393572 CDCA8Q53HL2 280 aa24.55■■□□□ 1.52
FAM3A-205ENST00000393572 ARHGEF25Q86VW2 580 aa24.55■■□□□ 1.52
FAM3A-205ENST00000393572 CD163L1Q9NR16 1453 aa24.55■■□□□ 1.52
FAM3A-205ENST00000393572 CRB1P82279 1406 aa24.54■■□□□ 1.52
FAM3A-205ENST00000393572 ZRANB1Q9UGI0 708 aa24.54■■□□□ 1.52
FAM3A-205ENST00000393572 C11orf95C9JLR9 678 aaPredicted RBP24.53■■□□□ 1.52
FAM3A-205ENST00000393572 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.53■■□□□ 1.52
FAM3A-205ENST00000393572 ABCC6O95255 1503 aa24.52■■□□□ 1.52
FAM3A-205ENST00000393572 PDE3BQ13370 1112 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms