RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 DHX16O60231 1041 aaKnown RBP3.89□□□□□ -1.79
PHF3-202ENST00000393387 PPP1R15AO75807 674 aaPredicted RBP3.89□□□□□ -1.79
PHF3-202ENST00000393387 SERPINC1P01008 464 aa3.89□□□□□ -1.79
PHF3-202ENST00000393387 TERF1P54274 439 aa3.89□□□□□ -1.79
PHF3-202ENST00000393387 ANKRD18AQ8IVF6 992 aa3.89□□□□□ -1.79
PHF3-202ENST00000393387 ATP6V1DQ9Y5K8 247 aa3.89□□□□□ -1.79
PHF3-202ENST00000393387 ESPNB1AK53 854 aa3.88□□□□□ -1.79
PHF3-202ENST00000393387 SETSIPP0DME0 302 aa3.88□□□□□ -1.79
PHF3-202ENST00000393387 ATXN8OSP0DMR3 200 aa3.88□□□□□ -1.79
PHF3-202ENST00000393387 LRCH2Q5VUJ6 765 aa3.88□□□□□ -1.79
PHF3-202ENST00000393387 MSL1Q68DK7 614 aa3.88□□□□□ -1.79
PHF3-202ENST00000393387 CCDC73Q6ZRK6 1079 aa3.88□□□□□ -1.79
PHF3-202ENST00000393387 POTEDQ86YR6 584 aa3.88□□□□□ -1.79
PHF3-202ENST00000393387 CEP83Q9Y592 693 aa3.88□□□□□ -1.79
PHF3-202ENST00000393387 ZWINTO95229 277 aa3.88□□□□□ -1.79
PHF3-202ENST00000393387 CLNS1AP54105 237 aaKnown RBP3.88□□□□□ -1.79
PHF3-202ENST00000393387 SAFB2Q14151 953 aaKnown RBP eCLIP3.88□□□□□ -1.796e-6■■■□□ 18.1
PHF3-202ENST00000393387 MRFAP1L1Q96HT8 127 aa3.88□□□□□ -1.79
PHF3-202ENST00000393387 CCDC6Q16204 474 aa3.88□□□□□ -1.79
PHF3-202ENST00000393387 GBP6Q6ZN66 633 aa3.88□□□□□ -1.79
PHF3-202ENST00000393387 SMC3Q9UQE7 1217 aa3.88□□□□□ -1.79
PHF3-202ENST00000393387 CA8P35219 290 aa3.88□□□□□ -1.79
PHF3-202ENST00000393387 VPS41P49754 854 aa3.88□□□□□ -1.79
PHF3-202ENST00000393387 RPUSD2Q8IZ73 545 aaKnown RBP3.88□□□□□ -1.79
PHF3-202ENST00000393387 ZNHIT6Q9NWK9 470 aaKnown RBP3.88□□□□□ -1.79
PHF3-202ENST00000393387 RAI14Q9P0K7 980 aa3.88□□□□□ -1.79
PHF3-202ENST00000393387 ATP2B1P20020 1258 aa3.88□□□□□ -1.79
PHF3-202ENST00000393387 ATICP31939 592 aa3.88□□□□□ -1.79
PHF3-202ENST00000393387 KIAA1328Q86T90 577 aa3.88□□□□□ -1.79
PHF3-202ENST00000393387 PIBF1Q8WXW3 757 aa3.88□□□□□ -1.79
PHF3-202ENST00000393387 CCDC47Q96A33 483 aaKnown RBP3.88□□□□□ -1.79
PHF3-202ENST00000393387 TRMT1Q9NXH9 659 aaKnown RBP3.88□□□□□ -1.79
PHF3-202ENST00000393387 RRP7AQ9Y3A4 280 aaKnown RBP3.88□□□□□ -1.79
PHF3-202ENST00000393387 SPTY2D1Q68D10 685 aaPredicted RBP3.88□□□□□ -1.79
PHF3-202ENST00000393387 CRACR2AQ9BSW2 395 aa3.88□□□□□ -1.79
PHF3-202ENST00000393387 MRFAP1Q9Y605 127 aa3.88□□□□□ -1.79
PHF3-202ENST00000393387 FIBPO43427 364 aa3.87□□□□□ -1.79
PHF3-202ENST00000393387 NFXL1Q6ZNB6 911 aa3.87□□□□□ -1.79
PHF3-202ENST00000393387 RABEP2Q9H5N1 569 aa3.87□□□□□ -1.79
PHF3-202ENST00000393387 SWAP70Q9UH65 585 aa3.87□□□□□ -1.79
PHF3-202ENST00000393387 CGNL1Q0VF96 1302 aa3.87□□□□□ -1.79
PHF3-202ENST00000393387 PEX19P40855 299 aa3.87□□□□□ -1.79
PHF3-202ENST00000393387 IKBKGQ9Y6K9 419 aa3.87□□□□□ -1.79
PHF3-202ENST00000393387 USH1CQ9Y6N9 552 aa3.87□□□□□ -1.79
PHF3-202ENST00000393387 CASQ1P31415 396 aa3.87□□□□□ -1.79
PHF3-202ENST00000393387 PPM1EQ8WY54 764 aa3.87□□□□□ -1.79
PHF3-202ENST00000393387 UBXN4Q92575 508 aa3.87□□□□□ -1.79
PHF3-202ENST00000393387 ZSWIM4Q9H7M6 989 aa3.87□□□□□ -1.79
PHF3-202ENST00000393387 TPX2Q9ULW0 747 aaKnown RBP3.87□□□□□ -1.79
PHF3-202ENST00000393387 A0A1B0GUL7 405 aa3.87□□□□□ -1.79
PHF3-202ENST00000393387 PDE6BP35913 854 aa3.87□□□□□ -1.79
PHF3-202ENST00000393387 IFFO1Q0D2I5 559 aa3.87□□□□□ -1.79
PHF3-202ENST00000393387 RABEP1Q15276 862 aa3.87□□□□□ -1.79
PHF3-202ENST00000393387 FILIP1Q7Z7B0 1213 aa3.87□□□□□ -1.79
PHF3-202ENST00000393387 NAT10Q9H0A0 1025 aaKnown RBP3.87□□□□□ -1.79
PHF3-202ENST00000393387 IPO8O15397 1037 aaKnown RBP3.87□□□□□ -1.79
PHF3-202ENST00000393387 STAMBPO95630 424 aa3.87□□□□□ -1.79
PHF3-202ENST00000393387 NPM1P06748 294 aaKnown RBP eCLIP3.87□□□□□ -1.79
PHF3-202ENST00000393387 RNF168Q8IYW5 571 aaPredicted RBP3.87□□□□□ -1.79
PHF3-202ENST00000393387 DDX27Q96GQ7 796 aaKnown RBP3.87□□□□□ -1.79
PHF3-202ENST00000393387 SDF4Q9BRK5 362 aa3.87□□□□□ -1.79
PHF3-202ENST00000393387 TANGO6Q9C0B7 1094 aa3.87□□□□□ -1.79
PHF3-202ENST00000393387 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.87□□□□□ -1.79
PHF3-202ENST00000393387 V9GYY5 206 aaPredicted RBP3.87□□□□□ -1.79
PHF3-202ENST00000393387 MXRA7P84157 204 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 CAMK4Q16566 473 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 DBN1Q16643 649 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 HSP90AB4PQ58FF6 505 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 CCDC178Q5BJE1 867 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 SMARCC1Q92922 1105 aaPredicted RBP3.86□□□□□ -1.79
PHF3-202ENST00000393387 C16orf45Q96MC5 204 aaPredicted RBP3.86□□□□□ -1.79
PHF3-202ENST00000393387 URI1O94763 535 aaPredicted RBP3.86□□□□□ -1.79
PHF3-202ENST00000393387 MAATS1Q7Z4T9 603 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 RPAINQ86UA6 219 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 FBF1Q8TES7 1133 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 POGKQ9P215 609 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 DYTNA2CJ06 578 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 CPLX1O14810 134 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 SF3A3Q12874 501 aaKnown RBP eCLIP3.86□□□□□ -1.79
PHF3-202ENST00000393387 SYCP1Q15431 976 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 KRBA2Q6ZNG9 492 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 MORC1Q86VD1 984 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 FEZ1Q99689 392 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 ELL2O00472 640 aaPredicted RBP3.86□□□□□ -1.79
PHF3-202ENST00000393387 LETM1O95202 739 aaPredicted RBP3.86□□□□□ -1.79
PHF3-202ENST00000393387 VIMP08670 466 aaKnown RBP3.86□□□□□ -1.79
PHF3-202ENST00000393387 CFAP58Q5T655 872 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 GBP7Q8N8V2 638 aaPredicted RBP3.86□□□□□ -1.79
PHF3-202ENST00000393387 SEPT8Q92599 483 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 MAGEC2Q9UBF1 373 aaPredicted RBP3.86□□□□□ -1.79
PHF3-202ENST00000393387 COG6Q9Y2V7 657 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 DNAJC21Q5F1R6 531 aaKnown RBP3.86□□□□□ -1.79
PHF3-202ENST00000393387 PPP1R12CQ9BZL4 782 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 NOL3O60936 208 aaKnown RBP3.86□□□□□ -1.79
PHF3-202ENST00000393387 ZRANB2O95218 330 aaKnown RBP eCLIP3.86□□□□□ -1.79
PHF3-202ENST00000393387 HSPA4P34932 840 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 CEP128Q6ZU80 1094 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 PPFIBP1Q86W92 1011 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 TXLNBQ8N3L3 684 aa3.86□□□□□ -1.79
PHF3-202ENST00000393387 CCDC43Q96MW1 224 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms