RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 DAXXQ9UER7 740 aaPredicted RBP14.6□□□□□ -0.07
PDCD4-202ENST00000393104 COL3A1P02461 1466 aaPredicted RBP14.6□□□□□ -0.07
PDCD4-202ENST00000393104 TNRQ92752 1358 aa14.6□□□□□ -0.07
PDCD4-202ENST00000393104 GAS2L3Q86XJ1 694 aa14.59□□□□□ -0.07
PDCD4-202ENST00000393104 BCL2L13Q9BXK5 485 aa14.59□□□□□ -0.07
PDCD4-202ENST00000393104 RIMS1Q86UR5 1692 aaKnown RBP14.59□□□□□ -0.07
PDCD4-202ENST00000393104 IDI1Q13907 227 aa14.59□□□□□ -0.07
PDCD4-202ENST00000393104 TCP11L2Q8N4U5 519 aa14.58□□□□□ -0.08
PDCD4-202ENST00000393104 NGEFQ8N5V2 710 aa14.58□□□□□ -0.08
PDCD4-202ENST00000393104 CCDC27Q2M243 656 aa14.57□□□□□ -0.08
PDCD4-202ENST00000393104 VGFO15240 615 aaPredicted RBP14.57□□□□□ -0.08
PDCD4-202ENST00000393104 NSD3Q9BZ95 1437 aa14.57□□□□□ -0.08
PDCD4-202ENST00000393104 CPS1P31327 1500 aa14.56□□□□□ -0.08
PDCD4-202ENST00000393104 TULP4Q9NRJ4 1543 aa14.56□□□□□ -0.08
PDCD4-202ENST00000393104 SPRYD3Q8NCJ5 442 aa14.55□□□□□ -0.08
PDCD4-202ENST00000393104 RIMS2Q9UQ26 1411 aa14.55□□□□□ -0.08
PDCD4-202ENST00000393104 CD2BP2O95400 341 aaKnown RBP14.55□□□□□ -0.08
PDCD4-202ENST00000393104 CDCA8Q53HL2 280 aa14.55□□□□□ -0.08
PDCD4-202ENST00000393104 WDR63Q8IWG1 891 aa14.55□□□□□ -0.08
PDCD4-202ENST00000393104 MVPQ14764 893 aaKnown RBP14.54□□□□□ -0.08
PDCD4-202ENST00000393104 PUS7Q96PZ0 661 aaKnown RBP14.54□□□□□ -0.08
PDCD4-202ENST00000393104 PLEKHF1Q96S99 279 aa14.54□□□□□ -0.08
PDCD4-202ENST00000393104 PTPRMP28827 1452 aa14.54□□□□□ -0.08
PDCD4-202ENST00000393104 RUNDC1Q96C34 613 aa14.54□□□□□ -0.08
PDCD4-202ENST00000393104 BECN1Q14457 450 aa14.53□□□□□ -0.08
PDCD4-202ENST00000393104 PMFBP1Q8TBY8 1022 aa14.53□□□□□ -0.08
PDCD4-202ENST00000393104 MED14O60244 1454 aa14.53□□□□□ -0.08
PDCD4-202ENST00000393104 TECPR2O15040 1411 aa14.53□□□□□ -0.08
PDCD4-202ENST00000393104 TRAK2O60296 914 aa14.53□□□□□ -0.08
PDCD4-202ENST00000393104 CEP170BQ9Y4F5 1589 aaPredicted RBP14.53□□□□□ -0.08
PDCD4-202ENST00000393104 SLC12A5Q9H2X9 1139 aa14.53□□□□□ -0.08
PDCD4-202ENST00000393104 AAMPQ13685 434 aa14.52□□□□□ -0.08
PDCD4-202ENST00000393104 GZF1Q9H116 711 aaPredicted RBP14.52□□□□□ -0.08
PDCD4-202ENST00000393104 L1TD1Q5T7N2 865 aaKnown RBP14.52□□□□□ -0.09
PDCD4-202ENST00000393104 HDAC1Q13547 482 aaPredicted RBP14.52□□□□□ -0.09
PDCD4-202ENST00000393104 TRIM35Q9UPQ4 493 aa14.52□□□□□ -0.09
PDCD4-202ENST00000393104 SMC5Q8IY18 1101 aa14.51□□□□□ -0.09
PDCD4-202ENST00000393104 C22orf23Q9BZE7 217 aa14.51□□□□□ -0.09
PDCD4-202ENST00000393104 AK9Q5TCS8 1911 aa14.51□□□□□ -0.09
PDCD4-202ENST00000393104 TRIM27P14373 513 aa14.51□□□□□ -0.09
PDCD4-202ENST00000393104 RBM25P49756 843 aaKnown RBP14.51□□□□□ -0.09
PDCD4-202ENST00000393104 FBXO31Q5XUX0 539 aaPredicted RBP14.51□□□□□ -0.09
PDCD4-202ENST00000393104 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.51□□□□□ -0.09
PDCD4-202ENST00000393104 TRHP20396 242 aaPredicted RBP14.51□□□□□ -0.09
PDCD4-202ENST00000393104 NEUROD2Q15784 382 aa14.5□□□□□ -0.09
PDCD4-202ENST00000393104 NCBP3Q53F19 620 aaKnown RBP14.5□□□□□ -0.09
PDCD4-202ENST00000393104 GOLGA6L3A6NEY3 463 aa14.5□□□□□ -0.09
PDCD4-202ENST00000393104 TMEM2Q9UHN6 1383 aa14.49□□□□□ -0.09
PDCD4-202ENST00000393104 ANKRD26Q9UPS8 1709 aa14.49□□□□□ -0.09
PDCD4-202ENST00000393104 MTHFSP49914 203 aa14.48□□□□□ -0.09
PDCD4-202ENST00000393104 TSR2Q969E8 191 aaKnown RBP14.48□□□□□ -0.09
PDCD4-202ENST00000393104 PLEKHG1Q9ULL1 1385 aa14.48□□□□□ -0.09
PDCD4-202ENST00000393104 ZBTB40Q9NUA8 1239 aa14.48□□□□□ -0.09
PDCD4-202ENST00000393104 GRPEL1Q9HAV7 217 aa14.48□□□□□ -0.09
PDCD4-202ENST00000393104 CHMP5Q9NZZ3 219 aa14.48□□□□□ -0.09
PDCD4-202ENST00000393104 XRN1Q8IZH2 1706 aaKnown RBP14.47□□□□□ -0.09
PDCD4-202ENST00000393104 CD163L1Q9NR16 1453 aa14.47□□□□□ -0.09
PDCD4-202ENST00000393104 ESF1Q9H501 851 aaKnown RBP14.47□□□□□ -0.09
PDCD4-202ENST00000393104 YTHDC2Q9H6S0 1430 aaKnown RBP14.47□□□□□ -0.09
PDCD4-202ENST00000393104 TNPO1Q92973 898 aaKnown RBP14.47□□□□□ -0.09
PDCD4-202ENST00000393104 SIRT1Q96EB6 747 aa14.47□□□□□ -0.09
PDCD4-202ENST00000393104 ARXQ96QS3 562 aa14.47□□□□□ -0.09
PDCD4-202ENST00000393104 SSH1Q8WYL5 1049 aa14.46□□□□□ -0.09
PDCD4-202ENST00000393104 SNX21Q969T3 373 aa14.46□□□□□ -0.09
PDCD4-202ENST00000393104 FAM135BQ49AJ0 1406 aa14.46□□□□□ -0.09
PDCD4-202ENST00000393104 TNNT2P45379 298 aaPredicted RBP14.46□□□□□ -0.1
PDCD4-202ENST00000393104 RWDD1Q9H446 243 aaPredicted RBP14.45□□□□□ -0.1
PDCD4-202ENST00000393104 MFAP1P55081 439 aaKnown RBP14.45□□□□□ -0.1
PDCD4-202ENST00000393104 RAB3GAP1Q15042 981 aa14.45□□□□□ -0.1
PDCD4-202ENST00000393104 SETD1BQ9UPS6 1966 aaKnown RBP14.45□□□□□ -0.1
PDCD4-202ENST00000393104 MRE11P49959 708 aa14.44□□□□□ -0.1
PDCD4-202ENST00000393104 HDGFP51858 240 aaKnown RBP14.44□□□□□ -0.1
PDCD4-202ENST00000393104 ABCC11Q96J66 1382 aa14.44□□□□□ -0.1
PDCD4-202ENST00000393104 NUCB1Q02818 461 aa14.44□□□□□ -0.1
PDCD4-202ENST00000393104 PPIP5K1Q6PFW1 1433 aa14.43□□□□□ -0.1
PDCD4-202ENST00000393104 ADAMTS13Q76LX8 1427 aa14.43□□□□□ -0.1
PDCD4-202ENST00000393104 DZIP1LQ8IYY4 767 aaKnown RBP14.43□□□□□ -0.1
PDCD4-202ENST00000393104 CLEC17AQ6ZS10 378 aa14.43□□□□□ -0.1
PDCD4-202ENST00000393104 TOPAZ1Q8N9V7 1692 aa14.42□□□□□ -0.1
PDCD4-202ENST00000393104 EXOSC9Q06265 439 aaKnown RBP14.42□□□□□ -0.1
PDCD4-202ENST00000393104 SIRT2Q8IXJ6 389 aa14.42□□□□□ -0.1
PDCD4-202ENST00000393104 TMEM57Q8N5G2 664 aa14.42□□□□□ -0.1
PDCD4-202ENST00000393104 CDC42BPGQ6DT37 1551 aa14.42□□□□□ -0.1
PDCD4-202ENST00000393104 ESPNB1AK53 854 aa14.42□□□□□ -0.1
PDCD4-202ENST00000393104 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.42□□□□□ -0.1
PDCD4-202ENST00000393104 ZKSCAN2Q63HK3 967 aa14.41□□□□□ -0.1
PDCD4-202ENST00000393104 MORC1Q86VD1 984 aa14.41□□□□□ -0.1
PDCD4-202ENST00000393104 RBM42Q9BTD8 480 aaKnown RBP14.41□□□□□ -0.1
PDCD4-202ENST00000393104 CANXP27824 592 aaKnown RBP14.41□□□□□ -0.1
PDCD4-202ENST00000393104 NOB1Q9ULX3 412 aaKnown RBP14.4□□□□□ -0.1
PDCD4-202ENST00000393104 CHGAP10645 457 aaKnown RBP14.4□□□□□ -0.1
PDCD4-202ENST00000393104 MLECQ14165 292 aa14.4□□□□□ -0.1
PDCD4-202ENST00000393104 ZMYND15Q9H091 742 aa14.4□□□□□ -0.1
PDCD4-202ENST00000393104 ATF7IPQ6VMQ6 1270 aa14.39□□□□□ -0.11
PDCD4-202ENST00000393104 PIK3R4Q99570 1358 aa14.39□□□□□ -0.11
PDCD4-202ENST00000393104 PTCH1Q13635 1447 aa14.39□□□□□ -0.11
PDCD4-202ENST00000393104 TUBGCP6Q96RT7 1819 aa14.39□□□□□ -0.11
PDCD4-202ENST00000393104 PNNQ9H307 717 aaKnown RBP14.39□□□□□ -0.11
PDCD4-202ENST00000393104 ANKRD36BQ8N2N9 1353 aa14.39□□□□□ -0.11
PDCD4-202ENST00000393104 TMEM132EQ6IEE7 984 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms