RNA–Protein interactions for RNA: ENST00000392871.6

GTDC1-205, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 2

Gene GTDC1, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-205ENST00000392871 KDM5DQ9BY66 1539 aa6.19□□□□□ -1.42
GTDC1-205ENST00000392871 KDM5CP41229 1560 aa6.19□□□□□ -1.42
GTDC1-205ENST00000392871 USP47Q96K76 1375 aa6.19□□□□□ -1.42
GTDC1-205ENST00000392871 ABCC1P33527 1531 aa6.18□□□□□ -1.42
GTDC1-205ENST00000392871 FAM135AQ9P2D6 1515 aa6.18□□□□□ -1.42
GTDC1-205ENST00000392871 FAM69CQ0P6D2 419 aa6.18□□□□□ -1.42
GTDC1-205ENST00000392871 POLR3GLQ9BT43 218 aa6.18□□□□□ -1.42
GTDC1-205ENST00000392871 FAM217BQ9NTX9 383 aaPredicted RBP6.18□□□□□ -1.42
GTDC1-205ENST00000392871 TBC1D12O60347 775 aa6.18□□□□□ -1.42
GTDC1-205ENST00000392871 MFAP1P55081 439 aaKnown RBP6.18□□□□□ -1.42
GTDC1-205ENST00000392871 ZNF330Q9Y3S2 320 aaPredicted RBP6.18□□□□□ -1.42
GTDC1-205ENST00000392871 SCAPERQ9BY12 1400 aa6.18□□□□□ -1.42
GTDC1-205ENST00000392871 SENP3-EIF4A1A0A087X0R7 540 aa6.17□□□□□ -1.42
GTDC1-205ENST00000392871 IGSF3O75054 1194 aa6.17□□□□□ -1.42
GTDC1-205ENST00000392871 IRX6P78412 446 aaPredicted RBP6.17□□□□□ -1.42
GTDC1-205ENST00000392871 ADGRL1O94910 1474 aa6.17□□□□□ -1.42
GTDC1-205ENST00000392871 CARNS1A5YM72 827 aa6.17□□□□□ -1.42
GTDC1-205ENST00000392871 EN1Q05925 392 aaPredicted RBP6.17□□□□□ -1.42
GTDC1-205ENST00000392871 TMCO4Q5TGY1 634 aa6.17□□□□□ -1.42
GTDC1-205ENST00000392871 RBM33Q96EV2 1170 aaKnown RBP6.17□□□□□ -1.42
GTDC1-205ENST00000392871 PRKRIP1Q9H875 184 aaPredicted RBP6.17□□□□□ -1.42
GTDC1-205ENST00000392871 GDPD2Q9HCC8 539 aa6.17□□□□□ -1.42
GTDC1-205ENST00000392871 RALGAPBQ86X10 1494 aa6.17□□□□□ -1.42
GTDC1-205ENST00000392871 SPDYE5A6NIY4 337 aa6.16□□□□□ -1.42
GTDC1-205ENST00000392871 C19orf67A6NJJ6 358 aa6.16□□□□□ -1.42
GTDC1-205ENST00000392871 POM121CA8CG34 1229 aa6.16□□□□□ -1.42
GTDC1-205ENST00000392871 OCEL1Q9H607 264 aa6.16□□□□□ -1.42
GTDC1-205ENST00000392871 GLI2P10070 1586 aa6.16□□□□□ -1.42
GTDC1-205ENST00000392871 DHX29Q7Z478 1369 aaKnown RBP6.16□□□□□ -1.42
GTDC1-205ENST00000392871 SPAG9O60271 1321 aaKnown RBP6.16□□□□□ -1.42
GTDC1-205ENST00000392871 MAP3K7O43318 606 aa6.16□□□□□ -1.42
GTDC1-205ENST00000392871 RFC5P40937 340 aa6.16□□□□□ -1.42
GTDC1-205ENST00000392871 METTL3Q86U44 580 aaKnown RBP6.16□□□□□ -1.42
GTDC1-205ENST00000392871 FAM9BQ8IZU0 186 aa6.16□□□□□ -1.42
GTDC1-205ENST00000392871 UNC13BO14795 1591 aa6.15□□□□□ -1.42
GTDC1-205ENST00000392871 DIP2BQ9P265 1576 aa6.15□□□□□ -1.42
GTDC1-205ENST00000392871 PLA2R1Q13018 1463 aa6.15□□□□□ -1.42
GTDC1-205ENST00000392871 MTMR14Q8NCE2 650 aa6.15□□□□□ -1.42
GTDC1-205ENST00000392871 MAST1Q9Y2H9 1570 aa6.15□□□□□ -1.43
GTDC1-205ENST00000392871 RBM25P49756 843 aaKnown RBP6.15□□□□□ -1.43
GTDC1-205ENST00000392871 DCAF11Q8TEB1 546 aa6.15□□□□□ -1.43
GTDC1-205ENST00000392871 ANO8Q9HCE9 1232 aaPredicted RBP6.15□□□□□ -1.43
GTDC1-205ENST00000392871 MRS2Q9HD23 443 aa6.15□□□□□ -1.43
GTDC1-205ENST00000392871 LIMD1Q9UGP4 676 aa6.15□□□□□ -1.43
GTDC1-205ENST00000392871 NEO1Q92859 1461 aa6.14□□□□□ -1.43
GTDC1-205ENST00000392871 UHRF1BP1Q6BDS2 1440 aa6.14□□□□□ -1.43
GTDC1-205ENST00000392871 CLK2P49760 499 aaKnown RBP6.14□□□□□ -1.43
GTDC1-205ENST00000392871 MAP3K4Q9Y6R4 1608 aa6.14□□□□□ -1.43
GTDC1-205ENST00000392871 PLXNC1O60486 1568 aa6.14□□□□□ -1.43
GTDC1-205ENST00000392871 RTEL1-TNFRSF6BF6WH68 1400 aa6.14□□□□□ -1.43
GTDC1-205ENST00000392871 RAPGEF3O95398 923 aa6.14□□□□□ -1.43
GTDC1-205ENST00000392871 CARD11Q9BXL7 1154 aa6.14□□□□□ -1.43
GTDC1-205ENST00000392871 PCDHGA10Q9Y5H3 936 aa6.14□□□□□ -1.43
GTDC1-205ENST00000392871 POGZQ7Z3K3 1410 aa6.13□□□□□ -1.43
GTDC1-205ENST00000392871 ZFYVE16Q7Z3T8 1539 aa6.13□□□□□ -1.43
GTDC1-205ENST00000392871 PTCD2Q8WV60 388 aaKnown RBP6.13□□□□□ -1.43
GTDC1-205ENST00000392871 TBC1D2Q9BYX2 928 aa6.13□□□□□ -1.43
GTDC1-205ENST00000392871 A2MP01023 1474 aa6.13□□□□□ -1.43
GTDC1-205ENST00000392871 ZNF518AQ6AHZ1 1483 aa6.13□□□□□ -1.43
GTDC1-205ENST00000392871 IQGAP3Q86VI3 1631 aa6.13□□□□□ -1.43
GTDC1-205ENST00000392871 NEFLP07196 543 aa6.13□□□□□ -1.43
GTDC1-205ENST00000392871 RGL3Q3MIN7 710 aa6.13□□□□□ -1.43
GTDC1-205ENST00000392871 MYT1LQ9UL68 1186 aa6.13□□□□□ -1.43
GTDC1-205ENST00000392871 TRPM1Q7Z4N2 1603 aa6.12□□□□□ -1.43
GTDC1-205ENST00000392871 CCDC144AA2RUR9 1427 aa6.12□□□□□ -1.43
GTDC1-205ENST00000392871 ST20-MTHFSA0A0A6YYL1 179 aa6.12□□□□□ -1.43
GTDC1-205ENST00000392871 ROCK2O75116 1388 aaKnown RBP6.12□□□□□ -1.43
GTDC1-205ENST00000392871 ATP7AQ04656 1500 aa6.12□□□□□ -1.43
GTDC1-205ENST00000392871 DUOX2Q9NRD8 1548 aa6.12□□□□□ -1.43
GTDC1-205ENST00000392871 G3V3G9 751 aa6.11□□□□□ -1.43
GTDC1-205ENST00000392871 PHF14O94880 888 aa6.11□□□□□ -1.43
GTDC1-205ENST00000392871 PRAG1Q86YV5 1406 aa6.11□□□□□ -1.43
GTDC1-205ENST00000392871 PXYLP1Q8TE99 480 aa6.11□□□□□ -1.43
GTDC1-205ENST00000392871 GLMNQ92990 594 aa6.11□□□□□ -1.43
GTDC1-205ENST00000392871 CFAP74Q9C0B2 1584 aa6.11□□□□□ -1.43
GTDC1-205ENST00000392871 E9PCH4 1651 aa6.11□□□□□ -1.43
GTDC1-205ENST00000392871 MAGI2Q86UL8 1455 aa6.11□□□□□ -1.43
GTDC1-205ENST00000392871 INO80Q9ULG1 1556 aaPredicted RBP6.11□□□□□ -1.43
GTDC1-205ENST00000392871 ERBINQ96RT1 1412 aa6.11□□□□□ -1.43
GTDC1-205ENST00000392871 ATMINO43313 823 aaPredicted RBP6.11□□□□□ -1.43
GTDC1-205ENST00000392871 NBPF1Q3BBV0 1214 aa6.11□□□□□ -1.43
GTDC1-205ENST00000392871 PADI6Q6TGC4 694 aa6.11□□□□□ -1.43
GTDC1-205ENST00000392871 TBC1D2BQ9UPU7 963 aa6.11□□□□□ -1.43
GTDC1-205ENST00000392871 MLH3Q9UHC1 1453 aa6.11□□□□□ -1.43
GTDC1-205ENST00000392871 FBXW7Q969H0 707 aa6.1□□□□□ -1.43
GTDC1-205ENST00000392871 CALR3Q96L12 384 aaKnown RBP6.1□□□□□ -1.43
GTDC1-205ENST00000392871 ABL2P42684 1182 aa6.1□□□□□ -1.43
GTDC1-205ENST00000392871 SLAIN1Q8ND83 568 aa6.1□□□□□ -1.43
GTDC1-205ENST00000392871 BANK1Q8NDB2 785 aa6.1□□□□□ -1.43
GTDC1-205ENST00000392871 ADAMTS19Q8TE59 1207 aa6.1□□□□□ -1.43
GTDC1-205ENST00000392871 ADGRG1Q9Y653 693 aa6.1□□□□□ -1.43
GTDC1-205ENST00000392871 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.09□□□□□ -1.43
GTDC1-205ENST00000392871 PPRC1Q5VV67 1664 aaKnown RBP6.09□□□□□ -1.43
GTDC1-205ENST00000392871 COL17A1Q9UMD9 1497 aaPredicted RBP6.09□□□□□ -1.43
GTDC1-205ENST00000392871 DISP3Q9P2K9 1392 aa6.09□□□□□ -1.43
GTDC1-205ENST00000392871 KIF3BO15066 747 aa6.09□□□□□ -1.43
GTDC1-205ENST00000392871 PPP2R2DQ66LE6 453 aa6.09□□□□□ -1.43
GTDC1-205ENST00000392871 COLQQ9Y215 455 aaPredicted RBP6.09□□□□□ -1.43
GTDC1-205ENST00000392871 ZBED9Q6R2W3 1325 aa6.09□□□□□ -1.44
GTDC1-205ENST00000392871 KIDINS220Q9ULH0 1771 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms