RNA–Protein interactions for RNA: ENST00000392784.6

USP30-203, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 2 BASIC

Gene USP30, Length 2,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-203ENST00000392784 U2AF1L5P0DN76 240 aaPredicted RBP12.25□□□□□ -0.45
USP30-203ENST00000392784 U2AF1Q01081 240 aaKnown RBP eCLIP12.25□□□□□ -0.45
USP30-203ENST00000392784 TCP11L2Q8N4U5 519 aa12.25□□□□□ -0.45
USP30-203ENST00000392784 ADGRB2O60241 1585 aa12.25□□□□□ -0.45
USP30-203ENST00000392784 TOPAZ1Q8N9V7 1692 aa12.25□□□□□ -0.45
USP30-203ENST00000392784 TRMT2AQ8IZ69 625 aaKnown RBP12.25□□□□□ -0.45
USP30-203ENST00000392784 RUNDC1Q96C34 613 aa12.25□□□□□ -0.45
USP30-203ENST00000392784 AMOTL2Q9Y2J4 779 aa12.25□□□□□ -0.45
USP30-203ENST00000392784 WWC1Q8IX03 1113 aa12.24□□□□□ -0.45
USP30-203ENST00000392784 THEMISQ8N1K5 641 aaPredicted RBP12.24□□□□□ -0.45
USP30-203ENST00000392784 ADAMTSL3P82987 1691 aa12.24□□□□□ -0.45
USP30-203ENST00000392784 NKTRP30414 1462 aaKnown RBP12.24□□□□□ -0.45
USP30-203ENST00000392784 C20orf194Q5TEA3 1177 aa12.23□□□□□ -0.45
USP30-203ENST00000392784 CCDC61Q9Y6R9 512 aa12.23□□□□□ -0.45
USP30-203ENST00000392784 EDC4Q6P2E9 1401 aaKnown RBP12.23□□□□□ -0.45
USP30-203ENST00000392784 U2SURPO15042 1029 aaKnown RBP12.23□□□□□ -0.45
USP30-203ENST00000392784 XRN1Q8IZH2 1706 aaKnown RBP12.22□□□□□ -0.45
USP30-203ENST00000392784 PPM1GO15355 546 aaPredicted RBP12.22□□□□□ -0.45
USP30-203ENST00000392784 NRKQ7Z2Y5 1582 aa12.21□□□□□ -0.45
USP30-203ENST00000392784 CCDC136Q96JN2 1154 aa12.21□□□□□ -0.45
USP30-203ENST00000392784 POLKQ9UBT6 870 aa12.21□□□□□ -0.45
USP30-203ENST00000392784 TBX22Q9Y458 520 aa12.21□□□□□ -0.45
USP30-203ENST00000392784 EMILIN1Q9Y6C2 1016 aa12.21□□□□□ -0.45
USP30-203ENST00000392784 PNPLA6Q8IY17 1366 aa12.2□□□□□ -0.46
USP30-203ENST00000392784 CRBNQ96SW2 442 aa12.2□□□□□ -0.46
USP30-203ENST00000392784 DIP2AQ14689 1571 aa12.2□□□□□ -0.46
USP30-203ENST00000392784 ZNF142P52746 1687 aaPredicted RBP12.2□□□□□ -0.46
USP30-203ENST00000392784 E9PSI1 815 aa12.19□□□□□ -0.46
USP30-203ENST00000392784 PLEKHF1Q96S99 279 aa12.19□□□□□ -0.46
USP30-203ENST00000392784 PHF23Q9BUL5 403 aaPredicted RBP12.19□□□□□ -0.46
USP30-203ENST00000392784 PTCH1Q13635 1447 aa12.19□□□□□ -0.46
USP30-203ENST00000392784 ACEP12821 1306 aa12.19□□□□□ -0.46
USP30-203ENST00000392784 KCNA6P17658 529 aa12.19□□□□□ -0.46
USP30-203ENST00000392784 DIAPH1O60610 1272 aaKnown RBP12.18□□□□□ -0.46
USP30-203ENST00000392784 BCAR3O75815 825 aa12.18□□□□□ -0.46
USP30-203ENST00000392784 RRS1Q15050 365 aaKnown RBP12.18□□□□□ -0.46
USP30-203ENST00000392784 LRRC7Q96NW7 1537 aa12.18□□□□□ -0.46
USP30-203ENST00000392784 RBM33Q96EV2 1170 aaKnown RBP12.18□□□□□ -0.46
USP30-203ENST00000392784 PMFBP1Q8TBY8 1022 aa12.17□□□□□ -0.46
USP30-203ENST00000392784 SETD1BQ9UPS6 1966 aaKnown RBP12.16□□□□□ -0.46
USP30-203ENST00000392784 CHD2O14647 1828 aaKnown RBP12.16□□□□□ -0.46
USP30-203ENST00000392784 NGEFQ8N5V2 710 aa12.16□□□□□ -0.46
USP30-203ENST00000392784 TTC21BQ7Z4L5 1316 aa12.15□□□□□ -0.46
USP30-203ENST00000392784 COG3Q96JB2 828 aa12.15□□□□□ -0.46
USP30-203ENST00000392784 RBM19Q9Y4C8 960 aaKnown RBP12.15□□□□□ -0.46
USP30-203ENST00000392784 USP6P35125 1406 aa12.15□□□□□ -0.46
USP30-203ENST00000392784 PLEKHG3A1L390 1219 aa12.15□□□□□ -0.46
USP30-203ENST00000392784 HMOX1P09601 288 aa12.15□□□□□ -0.46
USP30-203ENST00000392784 TMPOP42166 694 aaKnown RBP12.15□□□□□ -0.46
USP30-203ENST00000392784 TRIM35Q9UPQ4 493 aa12.15□□□□□ -0.46
USP30-203ENST00000392784 NALCNQ8IZF0 1738 aa12.15□□□□□ -0.47
USP30-203ENST00000392784 CCDC27Q2M243 656 aa12.14□□□□□ -0.47
USP30-203ENST00000392784 ZNF692Q9BU19 519 aaPredicted RBP12.14□□□□□ -0.47
USP30-203ENST00000392784 PEAK1Q9H792 1746 aa12.14□□□□□ -0.47
USP30-203ENST00000392784 CDK12Q9NYV4 1490 aaPredicted RBP12.13□□□□□ -0.47
USP30-203ENST00000392784 SOX12O15370 315 aa12.13□□□□□ -0.47
USP30-203ENST00000392784 TSR2Q969E8 191 aaKnown RBP12.13□□□□□ -0.47
USP30-203ENST00000392784 RSPH6AQ9H0K4 717 aa12.13□□□□□ -0.47
USP30-203ENST00000392784 FMN2Q9NZ56 1722 aa12.13□□□□□ -0.47
USP30-203ENST00000392784 OVOS2A0A0J9YW53 1432 aa12.13□□□□□ -0.47
USP30-203ENST00000392784 OVOS2Q6IE36 1432 aa12.13□□□□□ -0.47
USP30-203ENST00000392784 SSH2Q76I76 1423 aa12.13□□□□□ -0.47
USP30-203ENST00000392784 PRKAR2BP31323 418 aa12.13□□□□□ -0.47
USP30-203ENST00000392784 IL13P35225 146 aa12.13□□□□□ -0.47
USP30-203ENST00000392784 ANKLE2Q86XL3 938 aa12.13□□□□□ -0.47
USP30-203ENST00000392784 WDR63Q8IWG1 891 aa12.13□□□□□ -0.47
USP30-203ENST00000392784 MAPK8IP3Q9UPT6 1336 aa12.13□□□□□ -0.47
USP30-203ENST00000392784 AATKQ6ZMQ8 1374 aa12.12□□□□□ -0.47
USP30-203ENST00000392784 SKAP1Q86WV1 359 aa12.12□□□□□ -0.47
USP30-203ENST00000392784 PHACTR3Q96KR7 559 aa12.12□□□□□ -0.47
USP30-203ENST00000392784 DLG5Q8TDM6 1919 aa12.12□□□□□ -0.47
USP30-203ENST00000392784 PIK3C2AO00443 1686 aa12.11□□□□□ -0.47
USP30-203ENST00000392784 BCL2L13Q9BXK5 485 aa12.11□□□□□ -0.47
USP30-203ENST00000392784 RIPK4P57078 832 aa12.11□□□□□ -0.47
USP30-203ENST00000392784 TNNQ9UQP3 1299 aa12.11□□□□□ -0.47
USP30-203ENST00000392784 MARF1Q9Y4F3 1742 aaKnown RBP12.1□□□□□ -0.47
USP30-203ENST00000392784 FCHSD2O94868 740 aa12.1□□□□□ -0.47
USP30-203ENST00000392784 NGDNQ8NEJ9 315 aaKnown RBP12.1□□□□□ -0.47
USP30-203ENST00000392784 FANCIQ9NVI1 1328 aa12.1□□□□□ -0.47
USP30-203ENST00000392784 PIK3R4Q99570 1358 aa12.1□□□□□ -0.47
USP30-203ENST00000392784 RARSP54136 660 aaKnown RBP12.09□□□□□ -0.47
USP30-203ENST00000392784 THUMPD2Q9BTF0 503 aaKnown RBP12.09□□□□□ -0.47
USP30-203ENST00000392784 NUTM2GQ5VZR2 741 aa12.08□□□□□ -0.48
USP30-203ENST00000392784 AEBP1Q8IUX7 1158 aa12.08□□□□□ -0.48
USP30-203ENST00000392784 PANK1Q8TE04 598 aa12.08□□□□□ -0.48
USP30-203ENST00000392784 NPHP4O75161 1426 aaPredicted RBP12.07□□□□□ -0.48
USP30-203ENST00000392784 EIF4A2Q14240 407 aaKnown RBP12.07□□□□□ -0.48
USP30-203ENST00000392784 HSP90AB2PQ58FF8 381 aa12.07□□□□□ -0.48
USP30-203ENST00000392784 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.07□□□□□ -0.48
USP30-203ENST00000392784 FRAT1Q92837 279 aaPredicted RBP12.07□□□□□ -0.48
USP30-203ENST00000392784 EXOSC9Q06265 439 aaKnown RBP12.06□□□□□ -0.48
USP30-203ENST00000392784 NCBP3Q53F19 620 aaKnown RBP12.06□□□□□ -0.48
USP30-203ENST00000392784 MYH16Q9H6N6 1097 aa12.06□□□□□ -0.48
USP30-203ENST00000392784 USP31Q70CQ4 1352 aa12.06□□□□□ -0.48
USP30-203ENST00000392784 ANKARQ7Z5J8 1434 aa12.06□□□□□ -0.48
USP30-203ENST00000392784 RGPD1P0DJD0 1748 aa12.05□□□□□ -0.48
USP30-203ENST00000392784 RLBP1P12271 317 aa12.05□□□□□ -0.48
USP30-203ENST00000392784 MAP3K19Q56UN5 1328 aa12.05□□□□□ -0.48
USP30-203ENST00000392784 NFE2L2Q16236 605 aa12.04□□□□□ -0.48
USP30-203ENST00000392784 COG6Q9Y2V7 657 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms