RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 ZNF76P36508 570 aa4.75□□□□□ -1.65
UBR3-202ENST00000392632 TRAF1Q13077 416 aa4.75□□□□□ -1.65
UBR3-202ENST00000392632 ESCO1Q5FWF5 840 aa4.75□□□□□ -1.65
UBR3-202ENST00000392632 CNTROBQ8N137 903 aa4.75□□□□□ -1.65
UBR3-202ENST00000392632 GZF1Q9H116 711 aaPredicted RBP4.75□□□□□ -1.65
UBR3-202ENST00000392632 DACH1Q9UI36 760 aa4.75□□□□□ -1.65
UBR3-202ENST00000392632 GOLGA6L7A0A1B0GV03 622 aa4.74□□□□□ -1.65
UBR3-202ENST00000392632 CABP4P57796 275 aa4.74□□□□□ -1.65
UBR3-202ENST00000392632 C16orf71Q8IYS4 520 aaPredicted RBP4.74□□□□□ -1.65
UBR3-202ENST00000392632 ABTB2Q8N961 1025 aa4.74□□□□□ -1.65
UBR3-202ENST00000392632 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.74□□□□□ -1.65
UBR3-202ENST00000392632 VPS37CA5D8V6 355 aaPredicted RBP4.74□□□□□ -1.65
UBR3-202ENST00000392632 NOM1Q5C9Z4 860 aaKnown RBP4.74□□□□□ -1.65
UBR3-202ENST00000392632 CENPQQ7L2Z9 268 aaPredicted RBP4.74□□□□□ -1.65
UBR3-202ENST00000392632 FERMT2Q96AC1 680 aa4.74□□□□□ -1.65
UBR3-202ENST00000392632 ZNF692Q9BU19 519 aaPredicted RBP4.74□□□□□ -1.65
UBR3-202ENST00000392632 BAZ1AQ9NRL2 1556 aaPredicted RBP4.74□□□□□ -1.65
UBR3-202ENST00000392632 PDIA4P13667 645 aaKnown RBP4.74□□□□□ -1.65
UBR3-202ENST00000392632 RIPK4P57078 832 aa4.74□□□□□ -1.65
UBR3-202ENST00000392632 AIMP1Q12904 312 aaKnown RBP4.74□□□□□ -1.65
UBR3-202ENST00000392632 ZNF396Q96N95 335 aaPredicted RBP4.74□□□□□ -1.65
UBR3-202ENST00000392632 FSD1Q9BTV5 496 aa4.74□□□□□ -1.65
UBR3-202ENST00000392632 STARD3NLO95772 234 aa4.74□□□□□ -1.65
UBR3-202ENST00000392632 CCDC181Q5TID7 509 aa4.74□□□□□ -1.65
UBR3-202ENST00000392632 MTMR7Q9Y216 660 aa4.74□□□□□ -1.65
UBR3-202ENST00000392632 B4DLN1 442 aa4.73□□□□□ -1.65
UBR3-202ENST00000392632 CDKL5O76039 1030 aa4.73□□□□□ -1.65
UBR3-202ENST00000392632 HMGB1P09429 215 aaKnown RBP4.73□□□□□ -1.65
UBR3-202ENST00000392632 IGHMBP2P38935 993 aaKnown RBP4.73□□□□□ -1.65
UBR3-202ENST00000392632 MCM2P49736 904 aa4.73□□□□□ -1.65
UBR3-202ENST00000392632 MRPL12P52815 198 aaKnown RBP4.73□□□□□ -1.65
UBR3-202ENST00000392632 CTNNA3Q9UI47 895 aa4.73□□□□□ -1.65
UBR3-202ENST00000392632 MYBBP1AQ9BQG0 1328 aaKnown RBP4.73□□□□□ -1.65
UBR3-202ENST00000392632 TTC39AQ5SRH9 613 aa4.73□□□□□ -1.65
UBR3-202ENST00000392632 LRRC45Q96CN5 670 aa4.73□□□□□ -1.65
UBR3-202ENST00000392632 FERMT1Q9BQL6 677 aa4.73□□□□□ -1.65
UBR3-202ENST00000392632 DEF6Q9H4E7 631 aa4.73□□□□□ -1.65
UBR3-202ENST00000392632 ABCC8Q09428 1581 aa4.73□□□□□ -1.65
UBR3-202ENST00000392632 FAM177BA6PVY3 158 aa4.73□□□□□ -1.65
UBR3-202ENST00000392632 KINO60870 393 aaKnown RBP4.73□□□□□ -1.65
UBR3-202ENST00000392632 MATR3P43243 847 aaKnown RBP eCLIP4.73□□□□□ -1.652e-6■■■□□ 16.9
UBR3-202ENST00000392632 CCDC146Q8IYE0 955 aa4.73□□□□□ -1.65
UBR3-202ENST00000392632 DZIP1LQ8IYY4 767 aaKnown RBP4.73□□□□□ -1.65
UBR3-202ENST00000392632 ANKRD62A6NC57 917 aa4.73□□□□□ -1.65
UBR3-202ENST00000392632 ZPR1O75312 459 aa4.73□□□□□ -1.65
UBR3-202ENST00000392632 KIF20AO95235 890 aa4.73□□□□□ -1.65
UBR3-202ENST00000392632 KIF4AO95239 1232 aa4.73□□□□□ -1.65
UBR3-202ENST00000392632 HSP90AA2PQ14568 343 aaPredicted RBP4.73□□□□□ -1.65
UBR3-202ENST00000392632 CCDC150Q8NCX0 1101 aa4.73□□□□□ -1.65
UBR3-202ENST00000392632 GOLGA6L10A6NI86 522 aa4.72□□□□□ -1.65
UBR3-202ENST00000392632 STAMBPO95630 424 aa4.72□□□□□ -1.65
UBR3-202ENST00000392632 GBP2P32456 591 aaPredicted RBP4.72□□□□□ -1.65
UBR3-202ENST00000392632 NF2P35240 595 aa4.72□□□□□ -1.65
UBR3-202ENST00000392632 ANAPC15P60006 121 aa4.72□□□□□ -1.65
UBR3-202ENST00000392632 WDR78Q5VTH9 848 aa4.72□□□□□ -1.65
UBR3-202ENST00000392632 CRACR2BQ8N4Y2 399 aaPredicted RBP4.72□□□□□ -1.65
UBR3-202ENST00000392632 WASF1Q92558 559 aa4.72□□□□□ -1.65
UBR3-202ENST00000392632 DNAJC2Q99543 621 aaKnown RBP4.72□□□□□ -1.65
UBR3-202ENST00000392632 CEP126Q9P2H0 1117 aa4.72□□□□□ -1.65
UBR3-202ENST00000392632 PIP4K2BP78356 416 aa4.72□□□□□ -1.65
UBR3-202ENST00000392632 MAP7D2Q96T17 732 aa4.72□□□□□ -1.65
UBR3-202ENST00000392632 BEGAINQ9BUH8 593 aa4.72□□□□□ -1.65
UBR3-202ENST00000392632 HOMER2Q9NSB8 354 aa4.72□□□□□ -1.65
UBR3-202ENST00000392632 SSX2IPQ9Y2D8 614 aa4.72□□□□□ -1.65
UBR3-202ENST00000392632 LETM1O95202 739 aaPredicted RBP4.72□□□□□ -1.65
UBR3-202ENST00000392632 ANKRD1Q15327 319 aa4.72□□□□□ -1.65
UBR3-202ENST00000392632 PPP4R3BQ5MIZ7 849 aa4.72□□□□□ -1.65
UBR3-202ENST00000392632 LRSAM1Q6UWE0 723 aa4.72□□□□□ -1.65
UBR3-202ENST00000392632 ZHX3Q9H4I2 956 aa4.72□□□□□ -1.65
UBR3-202ENST00000392632 HMGN5P82970 282 aaKnown RBP4.72□□□□□ -1.65
UBR3-202ENST00000392632 HSP90AB3PQ58FF7 597 aa4.72□□□□□ -1.65
UBR3-202ENST00000392632 RUNDC1Q96C34 613 aa4.72□□□□□ -1.65
UBR3-202ENST00000392632 UBAC1Q9BSL1 405 aa4.72□□□□□ -1.65
UBR3-202ENST00000392632 RAB34Q9BZG1 259 aa4.72□□□□□ -1.65
UBR3-202ENST00000392632 PANK3Q9H999 370 aa4.72□□□□□ -1.65
UBR3-202ENST00000392632 HMGB1P1B2RPK0 211 aaPredicted RBP4.71□□□□□ -1.65
UBR3-202ENST00000392632 RFX1P22670 979 aa4.71□□□□□ -1.65
UBR3-202ENST00000392632 CUL5Q93034 780 aa4.71□□□□□ -1.65
UBR3-202ENST00000392632 SEPT11Q9NVA2 429 aaKnown RBP4.71□□□□□ -1.65
UBR3-202ENST00000392632 FAM13BQ9NYF5 915 aa4.71□□□□□ -1.65
UBR3-202ENST00000392632 SMARCA2P51531 1590 aa4.71□□□□□ -1.66
UBR3-202ENST00000392632 RRBP1Q9P2E9 1410 aaKnown RBP4.71□□□□□ -1.66
UBR3-202ENST00000392632 CCDC69A6NI79 296 aa4.71□□□□□ -1.66
UBR3-202ENST00000392632 MYO1BO43795 1136 aa4.71□□□□□ -1.66
UBR3-202ENST00000392632 LDHCP07864 332 aa4.71□□□□□ -1.66
UBR3-202ENST00000392632 NBPF8Q3BBV2 869 aa4.71□□□□□ -1.66
UBR3-202ENST00000392632 NBPF14Q5TI25 921 aa4.71□□□□□ -1.66
UBR3-202ENST00000392632 FOXD4L5Q5VV16 416 aaPredicted RBP4.71□□□□□ -1.66
UBR3-202ENST00000392632 JAKMIP3Q5VZ66 844 aa4.71□□□□□ -1.66
UBR3-202ENST00000392632 CCDC91Q7Z6B0 441 aa4.71□□□□□ -1.66
UBR3-202ENST00000392632 FOXD4L4Q8WXT5 416 aaPredicted RBP4.71□□□□□ -1.66
UBR3-202ENST00000392632 ZNF592Q92610 1267 aa4.71□□□□□ -1.66
UBR3-202ENST00000392632 SURF6O75683 361 aaKnown RBP4.71□□□□□ -1.66
UBR3-202ENST00000392632 STK38Q15208 465 aa4.71□□□□□ -1.66
UBR3-202ENST00000392632 FAM161AQ3B820 660 aa4.71□□□□□ -1.66
UBR3-202ENST00000392632 IQCEQ6IPM2 695 aa4.71□□□□□ -1.66
UBR3-202ENST00000392632 NECTIN2Q92692 538 aa4.71□□□□□ -1.66
UBR3-202ENST00000392632 CRBNQ96SW2 442 aa4.71□□□□□ -1.66
UBR3-202ENST00000392632 H0YHG0 523 aa4.71□□□□□ -1.66
UBR3-202ENST00000392632 ATP2B1P20020 1258 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms