RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 DDX19BQ9UMR2 479 aa17.52■□□□□ 0.39
CCDC50-201ENST00000392455 HIP1O00291 1037 aa17.52■□□□□ 0.39
CCDC50-201ENST00000392455 NASPP49321 788 aaPredicted RBP17.52■□□□□ 0.39
CCDC50-201ENST00000392455 MRE11P49959 708 aa17.52■□□□□ 0.39
CCDC50-201ENST00000392455 CEP63Q96MT8 703 aa17.51■□□□□ 0.39
CCDC50-201ENST00000392455 RRP1P56182 461 aaKnown RBP17.51■□□□□ 0.39
CCDC50-201ENST00000392455 SDF4Q9BRK5 362 aa17.51■□□□□ 0.39
CCDC50-201ENST00000392455 TMEM132AQ24JP5 1023 aa17.51■□□□□ 0.39
CCDC50-201ENST00000392455 GBP3Q9H0R5 595 aa17.51■□□□□ 0.39
CCDC50-201ENST00000392455 FOSBP53539 338 aa17.5■□□□□ 0.39
CCDC50-201ENST00000392455 TOP2AP11388 1531 aaKnown RBP17.5■□□□□ 0.39
CCDC50-201ENST00000392455 POTEJP0CG39 1038 aa17.5■□□□□ 0.39
CCDC50-201ENST00000392455 MAP9Q49MG5 647 aa17.5■□□□□ 0.39
CCDC50-201ENST00000392455 ZNF396Q96N95 335 aaPredicted RBP17.5■□□□□ 0.39
CCDC50-201ENST00000392455 PDE4AP27815 886 aa17.5■□□□□ 0.39
CCDC50-201ENST00000392455 PDILTQ8N807 584 aa17.5■□□□□ 0.39
CCDC50-201ENST00000392455 JAKMIP3Q5VZ66 844 aa17.49■□□□□ 0.39
CCDC50-201ENST00000392455 SAMD1Q6SPF0 538 aaPredicted RBP17.49■□□□□ 0.39
CCDC50-201ENST00000392455 DZIP1LQ8IYY4 767 aaKnown RBP17.49■□□□□ 0.39
CCDC50-201ENST00000392455 LRRCC1Q9C099 1032 aa17.49■□□□□ 0.39
CCDC50-201ENST00000392455 USP47Q96K76 1375 aa17.49■□□□□ 0.39
CCDC50-201ENST00000392455 EXOC6Q8TAG9 804 aa17.48■□□□□ 0.39
CCDC50-201ENST00000392455 CBFA2T2O43439 604 aa17.48■□□□□ 0.39
CCDC50-201ENST00000392455 G3BP1Q13283 466 aaKnown RBP eCLIP17.48■□□□□ 0.39
CCDC50-201ENST00000392455 CCDC97Q96F63 343 aaPredicted RBP17.48■□□□□ 0.39
CCDC50-201ENST00000392455 DIAPH1O60610 1272 aaKnown RBP17.47■□□□□ 0.39
CCDC50-201ENST00000392455 RIPK4P57078 832 aa17.47■□□□□ 0.39
CCDC50-201ENST00000392455 MICALCLQ6ZW33 695 aa17.47■□□□□ 0.39
CCDC50-201ENST00000392455 KIF2AO00139 706 aaPredicted RBP17.47■□□□□ 0.39
CCDC50-201ENST00000392455 GIGYF2Q6Y7W6 1299 aaKnown RBP17.47■□□□□ 0.39
CCDC50-201ENST00000392455 KLHL34Q8N239 644 aa17.47■□□□□ 0.39
CCDC50-201ENST00000392455 RBM33Q96EV2 1170 aaKnown RBP17.47■□□□□ 0.39
CCDC50-201ENST00000392455 DDX23Q9BUQ8 820 aaKnown RBP17.47■□□□□ 0.39
CCDC50-201ENST00000392455 JPH4Q96JJ6 628 aa17.47■□□□□ 0.39
CCDC50-201ENST00000392455 CCDC175P0C221 793 aa17.46■□□□□ 0.39
CCDC50-201ENST00000392455 SMC2O95347 1197 aa17.46■□□□□ 0.39
CCDC50-201ENST00000392455 FKBP5Q13451 457 aaPredicted RBP17.46■□□□□ 0.39
CCDC50-201ENST00000392455 PPFIBP1Q86W92 1011 aa17.46■□□□□ 0.38
CCDC50-201ENST00000392455 FYB1O15117 783 aa17.45■□□□□ 0.38
CCDC50-201ENST00000392455 APAF1O14727 1248 aa17.44■□□□□ 0.38
CCDC50-201ENST00000392455 NEBLO76041 1014 aa17.44■□□□□ 0.38
CCDC50-201ENST00000392455 LUZP1Q86V48 1076 aa17.44■□□□□ 0.38
CCDC50-201ENST00000392455 TRIM5Q9C035 493 aa17.44■□□□□ 0.38
CCDC50-201ENST00000392455 DDX12PQ92771 950 aa17.44■□□□□ 0.38
CCDC50-201ENST00000392455 SHTN1A0MZ66 631 aa17.43■□□□□ 0.38
CCDC50-201ENST00000392455 PDCL3Q9H2J4 239 aa17.43■□□□□ 0.38
CCDC50-201ENST00000392455 VPS37CA5D8V6 355 aaPredicted RBP17.42■□□□□ 0.38
CCDC50-201ENST00000392455 API5Q9BZZ5 524 aaKnown RBP17.42■□□□□ 0.38
CCDC50-201ENST00000392455 TSPYL4Q9UJ04 414 aa17.42■□□□□ 0.38
CCDC50-201ENST00000392455 MAP2K1Q02750 393 aaPredicted RBP17.42■□□□□ 0.38
CCDC50-201ENST00000392455 CCDC27Q2M243 656 aa17.41■□□□□ 0.38
CCDC50-201ENST00000392455 GCOM1H8Y6P7 765 aaPredicted RBP17.41■□□□□ 0.38
CCDC50-201ENST00000392455 MYZAPP0CAP1 466 aa17.41■□□□□ 0.38
CCDC50-201ENST00000392455 IMMTQ16891 758 aaKnown RBP17.41■□□□□ 0.38
CCDC50-201ENST00000392455 ZBED9Q6R2W3 1325 aa17.41■□□□□ 0.38
CCDC50-201ENST00000392455 KRT18P05783 430 aaKnown RBP17.4■□□□□ 0.38
CCDC50-201ENST00000392455 ANKRD1Q15327 319 aa17.4■□□□□ 0.38
CCDC50-201ENST00000392455 RIC3Q7Z5B4 369 aa17.4■□□□□ 0.38
CCDC50-201ENST00000392455 AIMP1Q12904 312 aaKnown RBP17.4■□□□□ 0.38
CCDC50-201ENST00000392455 PPP1R12BO60237 982 aaPredicted RBP17.4■□□□□ 0.38
CCDC50-201ENST00000392455 TAX1BP1Q86VP1 789 aa17.39■□□□□ 0.38
CCDC50-201ENST00000392455 ZNF397Q8NF99 534 aaPredicted RBP17.39■□□□□ 0.38
CCDC50-201ENST00000392455 HMOX1P09601 288 aa17.39■□□□□ 0.37
CCDC50-201ENST00000392455 ANAPC15P60006 121 aa17.39■□□□□ 0.37
CCDC50-201ENST00000392455 NEUROD6Q96NK8 337 aa17.39■□□□□ 0.37
CCDC50-201ENST00000392455 EPB41L2O43491 1005 aaKnown RBP17.39■□□□□ 0.37
CCDC50-201ENST00000392455 ERC1Q8IUD2 1116 aa17.38■□□□□ 0.37
CCDC50-201ENST00000392455 TBC1D2BQ9UPU7 963 aa17.38■□□□□ 0.37
CCDC50-201ENST00000392455 SREK1Q8WXA9 508 aaKnown RBP17.38■□□□□ 0.37
CCDC50-201ENST00000392455 FANCIQ9NVI1 1328 aa17.38■□□□□ 0.37
CCDC50-201ENST00000392455 C6orf163Q5TEZ5 329 aa17.38■□□□□ 0.37
CCDC50-201ENST00000392455 CCDC192P0DO97 292 aa17.38■□□□□ 0.37
CCDC50-201ENST00000392455 CYB5RLQ6IPT4 315 aa17.37■□□□□ 0.37
CCDC50-201ENST00000392455 BMP2KQ9NSY1 1161 aaPredicted RBP17.37■□□□□ 0.37
CCDC50-201ENST00000392455 TAOK3Q9H2K8 898 aa17.37■□□□□ 0.37
CCDC50-201ENST00000392455 WASHC4Q2M389 1173 aa17.37■□□□□ 0.37
CCDC50-201ENST00000392455 RUNDC1Q96C34 613 aa17.37■□□□□ 0.37
CCDC50-201ENST00000392455 ATF3P18847 181 aa17.37■□□□□ 0.37
CCDC50-201ENST00000392455 CCDC148Q8NFR7 591 aa17.37■□□□□ 0.37
CCDC50-201ENST00000392455 TSPY26PQ9H489 355 aa17.37■□□□□ 0.37
CCDC50-201ENST00000392455 SMC1AQ14683 1233 aaKnown RBP17.37■□□□□ 0.37
CCDC50-201ENST00000392455 CNTROBQ8N137 903 aa17.37■□□□□ 0.37
CCDC50-201ENST00000392455 PRKRIP1Q9H875 184 aaPredicted RBP17.37■□□□□ 0.37
CCDC50-201ENST00000392455 MTMR7Q9Y216 660 aa17.36■□□□□ 0.37
CCDC50-201ENST00000392455 CRACR2AQ9BSW2 395 aa17.36■□□□□ 0.37
CCDC50-201ENST00000392455 ZWINTO95229 277 aa17.36■□□□□ 0.37
CCDC50-201ENST00000392455 KDM4AO75164 1064 aa17.36■□□□□ 0.37
CCDC50-201ENST00000392455 RAPGEF4Q8WZA2 1011 aa17.36■□□□□ 0.37
CCDC50-201ENST00000392455 BCCIPQ9P287 314 aaKnown RBP eCLIP17.36■□□□□ 0.37
CCDC50-201ENST00000392455 NUTM2GQ5VZR2 741 aa17.35■□□□□ 0.37
CCDC50-201ENST00000392455 RRP9O43818 475 aaKnown RBP17.35■□□□□ 0.37
CCDC50-201ENST00000392455 PKNOX2Q96KN3 472 aa17.35■□□□□ 0.37
CCDC50-201ENST00000392455 FERMT1Q9BQL6 677 aa17.35■□□□□ 0.37
CCDC50-201ENST00000392455 IKQ13123 557 aaPredicted RBP17.35■□□□□ 0.37
CCDC50-201ENST00000392455 VPS36Q86VN1 386 aa17.35■□□□□ 0.37
CCDC50-201ENST00000392455 PTPRGP23470 1445 aa17.34■□□□□ 0.37
CCDC50-201ENST00000392455 FERP16591 822 aa17.34■□□□□ 0.37
CCDC50-201ENST00000392455 AEBP1Q8IUX7 1158 aa17.34■□□□□ 0.37
CCDC50-201ENST00000392455 PHF23Q9BUL5 403 aaPredicted RBP17.34■□□□□ 0.37
CCDC50-201ENST00000392455 DAAM2Q86T65 1068 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms