RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 FMN2Q9NZ56 1722 aa26.24■■□□□ 1.79
CSNK1D-203ENST00000392334 FYB1O15117 783 aa26.24■■□□□ 1.79
CSNK1D-203ENST00000392334 CDC42BPGQ6DT37 1551 aa26.23■■□□□ 1.79
CSNK1D-203ENST00000392334 BCL11AQ9H165 835 aa26.23■■□□□ 1.79
CSNK1D-203ENST00000392334 XIRP1Q702N8 1843 aaKnown RBP26.22■■□□□ 1.79
CSNK1D-203ENST00000392334 PDE3BQ13370 1112 aa26.21■■□□□ 1.79
CSNK1D-203ENST00000392334 SALL2Q9Y467 1007 aaPredicted RBP26.21■■□□□ 1.79
CSNK1D-203ENST00000392334 TOPAZ1Q8N9V7 1692 aa26.21■■□□□ 1.79
CSNK1D-203ENST00000392334 C19orf44Q9H6X5 657 aa26.21■■□□□ 1.79
CSNK1D-203ENST00000392334 ADAMTS8Q9UP79 889 aa26.21■■□□□ 1.79
CSNK1D-203ENST00000392334 PMFBP1Q8TBY8 1022 aa26.2■■□□□ 1.78
CSNK1D-203ENST00000392334 LRRC7Q96NW7 1537 aa26.19■■□□□ 1.78
CSNK1D-203ENST00000392334 RRP1P56182 461 aaKnown RBP26.17■■□□□ 1.78
CSNK1D-203ENST00000392334 WDR43Q15061 677 aaKnown RBP eCLIP26.17■■□□□ 1.78
CSNK1D-203ENST00000392334 NOP58Q9Y2X3 529 aaKnown RBP26.17■■□□□ 1.78
CSNK1D-203ENST00000392334 CPSF1Q10570 1443 aaKnown RBP26.16■■□□□ 1.78
CSNK1D-203ENST00000392334 MTHFSP49914 203 aa26.16■■□□□ 1.78
CSNK1D-203ENST00000392334 NSD2O96028 1365 aa26.16■■□□□ 1.78
CSNK1D-203ENST00000392334 ACEP12821 1306 aa26.16■■□□□ 1.78
CSNK1D-203ENST00000392334 ITSN1Q15811 1721 aa26.15■■□□□ 1.78
CSNK1D-203ENST00000392334 ANKARQ7Z5J8 1434 aa26.15■■□□□ 1.78
CSNK1D-203ENST00000392334 PLEKHG3A1L390 1219 aa26.14■■□□□ 1.78
CSNK1D-203ENST00000392334 FBLN1P23142 703 aa26.14■■□□□ 1.77
CSNK1D-203ENST00000392334 NME9Q86XW9 330 aa26.14■■□□□ 1.77
CSNK1D-203ENST00000392334 ZRANB1Q9UGI0 708 aa26.14■■□□□ 1.77
CSNK1D-203ENST00000392334 NCOA3Q9Y6Q9 1424 aa26.13■■□□□ 1.77
CSNK1D-203ENST00000392334 AKAP12Q02952 1782 aa26.12■■□□□ 1.77
CSNK1D-203ENST00000392334 ATF3P18847 181 aa26.12■■□□□ 1.77
CSNK1D-203ENST00000392334 ESCO1Q5FWF5 840 aa26.11■■□□□ 1.77
CSNK1D-203ENST00000392334 ORAI2Q96SN7 254 aa26.11■■□□□ 1.77
CSNK1D-203ENST00000392334 BLMP54132 1417 aaPredicted RBP26.11■■□□□ 1.77
CSNK1D-203ENST00000392334 RCAN3Q9UKA8 241 aa26.1■■□□□ 1.77
CSNK1D-203ENST00000392334 MSH6P52701 1360 aa26.1■■□□□ 1.77
CSNK1D-203ENST00000392334 NGDNQ8NEJ9 315 aaKnown RBP26.09■■□□□ 1.77
CSNK1D-203ENST00000392334 ZNF692Q9BU19 519 aaPredicted RBP26.09■■□□□ 1.77
CSNK1D-203ENST00000392334 MON2Q7Z3U7 1717 aa26.09■■□□□ 1.77
CSNK1D-203ENST00000392334 EDC4Q6P2E9 1401 aaKnown RBP26.09■■□□□ 1.77
CSNK1D-203ENST00000392334 CCDC146Q8IYE0 955 aa26.08■■□□□ 1.77
CSNK1D-203ENST00000392334 PHF8Q9UPP1 1060 aa26.07■■□□□ 1.76
CSNK1D-203ENST00000392334 ANP32AP39687 249 aaKnown RBP26.07■■□□□ 1.76
CSNK1D-203ENST00000392334 POLR3AO14802 1390 aaPredicted RBP26.06■■□□□ 1.76
CSNK1D-203ENST00000392334 DCCP43146 1447 aa26.06■■□□□ 1.76
CSNK1D-203ENST00000392334 CADPS2Q86UW7 1296 aa26.06■■□□□ 1.76
CSNK1D-203ENST00000392334 MST1RQ04912 1400 aa26.06■■□□□ 1.76
CSNK1D-203ENST00000392334 IPO9Q96P70 1041 aaKnown RBP26.05■■□□□ 1.76
CSNK1D-203ENST00000392334 C1orf167Q5SNV9 1468 aa26.05■■□□□ 1.76
CSNK1D-203ENST00000392334 USP6P35125 1406 aa26.04■■□□□ 1.76
CSNK1D-203ENST00000392334 LTBP4Q8N2S1 1624 aa26.04■■□□□ 1.76
CSNK1D-203ENST00000392334 PPM1GO15355 546 aaPredicted RBP26.04■■□□□ 1.76
CSNK1D-203ENST00000392334 CFAP53Q96M91 514 aa26.02■■□□□ 1.76
CSNK1D-203ENST00000392334 TTC21BQ7Z4L5 1316 aa26.02■■□□□ 1.76
CSNK1D-203ENST00000392334 TCERG1O14776 1098 aaKnown RBP26.02■■□□□ 1.76
CSNK1D-203ENST00000392334 EXOC6Q8TAG9 804 aa26.02■■□□□ 1.76
CSNK1D-203ENST00000392334 KIF20BQ96Q89 1820 aa26.01■■□□□ 1.76
CSNK1D-203ENST00000392334 FOXO3O43524 673 aa26.01■■□□□ 1.75
CSNK1D-203ENST00000392334 NRKQ7Z2Y5 1582 aa26■■□□□ 1.75
CSNK1D-203ENST00000392334 COG3Q96JB2 828 aa26■■□□□ 1.75
CSNK1D-203ENST00000392334 PAK3O75914 559 aaPredicted RBP26■■□□□ 1.75
CSNK1D-203ENST00000392334 SSH2Q76I76 1423 aa25.98■■□□□ 1.75
CSNK1D-203ENST00000392334 XPCQ01831 940 aaPredicted RBP25.98■■□□□ 1.75
CSNK1D-203ENST00000392334 ANKRD26Q9UPS8 1709 aa25.97■■□□□ 1.75
CSNK1D-203ENST00000392334 POLKQ9UBT6 870 aa25.97■■□□□ 1.75
CSNK1D-203ENST00000392334 DDX17Q92841 729 aaKnown RBP25.96■■□□□ 1.75
CSNK1D-203ENST00000392334 SOX12O15370 315 aa25.95■■□□□ 1.75
CSNK1D-203ENST00000392334 PSME1Q06323 249 aa25.95■■□□□ 1.75
CSNK1D-203ENST00000392334 RRS1Q15050 365 aaKnown RBP25.95■■□□□ 1.75
CSNK1D-203ENST00000392334 SLAIN2Q9P270 581 aa25.95■■□□□ 1.75
CSNK1D-203ENST00000392334 EMILIN1Q9Y6C2 1016 aa25.95■■□□□ 1.75
CSNK1D-203ENST00000392334 MS4A1P11836 297 aa25.95■■□□□ 1.74
CSNK1D-203ENST00000392334 APAF1O14727 1248 aa25.94■■□□□ 1.74
CSNK1D-203ENST00000392334 U2SURPO15042 1029 aaKnown RBP25.93■■□□□ 1.74
CSNK1D-203ENST00000392334 U2AF1L5P0DN76 240 aaPredicted RBP25.93■■□□□ 1.74
CSNK1D-203ENST00000392334 U2AF1Q01081 240 aaKnown RBP eCLIP25.93■■□□□ 1.746e-7■□□□□ 10.7
CSNK1D-203ENST00000392334 CDCA7LQ96GN5 454 aa25.92■■□□□ 1.74
CSNK1D-203ENST00000392334 SHPRHQ149N8 1683 aa25.92■■□□□ 1.74
CSNK1D-203ENST00000392334 NUTM2GQ5VZR2 741 aa25.92■■□□□ 1.74
CSNK1D-203ENST00000392334 ZBTB47Q9UFB7 747 aaPredicted RBP25.91■■□□□ 1.74
CSNK1D-203ENST00000392334 KIF1AQ12756 1690 aa25.9■■□□□ 1.74
CSNK1D-203ENST00000392334 BRINP3Q76B58 766 aa25.9■■□□□ 1.74
CSNK1D-203ENST00000392334 PIK3C2AO00443 1686 aa25.89■■□□□ 1.73
CSNK1D-203ENST00000392334 TTC21AQ8NDW8 1320 aa25.88■■□□□ 1.73
CSNK1D-203ENST00000392334 DIAPH1O60610 1272 aaKnown RBP25.88■■□□□ 1.73
CSNK1D-203ENST00000392334 DEKP35659 375 aaKnown RBP25.88■■□□□ 1.73
CSNK1D-203ENST00000392334 KRT28Q7Z3Y7 464 aa25.87■■□□□ 1.73
CSNK1D-203ENST00000392334 NEUROD2Q15784 382 aa25.87■■□□□ 1.73
CSNK1D-203ENST00000392334 ABTB2Q8N961 1025 aa25.87■■□□□ 1.73
CSNK1D-203ENST00000392334 RRP7AQ9Y3A4 280 aaKnown RBP25.86■■□□□ 1.73
CSNK1D-203ENST00000392334 COL3A1P02461 1466 aaPredicted RBP25.85■■□□□ 1.73
CSNK1D-203ENST00000392334 OVOS2A0A0J9YW53 1432 aa25.84■■□□□ 1.73
CSNK1D-203ENST00000392334 OVOS2Q6IE36 1432 aa25.84■■□□□ 1.73
CSNK1D-203ENST00000392334 PNPLA6Q8IY17 1366 aa25.84■■□□□ 1.73
CSNK1D-203ENST00000392334 PDE4AP27815 886 aa25.84■■□□□ 1.73
CSNK1D-203ENST00000392334 NLRP6P59044 892 aa25.84■■□□□ 1.73
CSNK1D-203ENST00000392334 BACH2Q9BYV9 841 aa25.84■■□□□ 1.73
CSNK1D-203ENST00000392334 MAP2P11137 1827 aaKnown RBP25.84■■□□□ 1.73
CSNK1D-203ENST00000392334 RUNDC1Q96C34 613 aa25.83■■□□□ 1.73
CSNK1D-203ENST00000392334 AATKQ6ZMQ8 1374 aa25.82■■□□□ 1.72
CSNK1D-203ENST00000392334 TRPM3Q9HCF6 1732 aaPredicted RBP25.82■■□□□ 1.72
CSNK1D-203ENST00000392334 LMOD2Q6P5Q4 547 aa25.81■■□□□ 1.72
CSNK1D-203ENST00000392334 NPHP3Q7Z494 1330 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms