RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 TTC24A2A3L6 582 aaPredicted RBP8.29□□□□□ -1.08
TRAV40-201ENST00000390467 CTHP32929 405 aa8.29□□□□□ -1.08
TRAV40-201ENST00000390467 PROCA1Q8NCQ7 364 aaPredicted RBP8.29□□□□□ -1.08
TRAV40-201ENST00000390467 SNIP1Q8TAD8 396 aaKnown RBP8.29□□□□□ -1.08
TRAV40-201ENST00000390467 BAP1Q92560 729 aa8.29□□□□□ -1.08
TRAV40-201ENST00000390467 AVPP01185 164 aa8.28□□□□□ -1.08
TRAV40-201ENST00000390467 SKIV2LQ15477 1246 aaKnown RBP8.28□□□□□ -1.08
TRAV40-201ENST00000390467 TPRNQ4KMQ1 711 aa8.28□□□□□ -1.08
TRAV40-201ENST00000390467 ZNF511Q8NB15 262 aa8.28□□□□□ -1.08
TRAV40-201ENST00000390467 AAASQ9NRG9 546 aa8.28□□□□□ -1.08
TRAV40-201ENST00000390467 EHBP1Q8NDI1 1231 aa8.27□□□□□ -1.09
TRAV40-201ENST00000390467 POTECB2RU33 542 aa8.26□□□□□ -1.09
TRAV40-201ENST00000390467 SIAH2O43255 324 aa8.26□□□□□ -1.09
TRAV40-201ENST00000390467 NEUROD2Q15784 382 aa8.26□□□□□ -1.09
TRAV40-201ENST00000390467 CRIPAKQ8N1N5 446 aa8.26□□□□□ -1.09
TRAV40-201ENST00000390467 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.26□□□□□ -1.09
TRAV40-201ENST00000390467 BRPF1P55201 1214 aaPredicted RBP8.25□□□□□ -1.09
TRAV40-201ENST00000390467 HPS1Q92902 700 aa8.25□□□□□ -1.09
TRAV40-201ENST00000390467 DACH1Q9UI36 760 aa8.25□□□□□ -1.09
TRAV40-201ENST00000390467 TLL2Q9Y6L7 1015 aa8.25□□□□□ -1.09
TRAV40-201ENST00000390467 ALDH1A1P00352 501 aa8.24□□□□□ -1.09
TRAV40-201ENST00000390467 HELBQ8NG08 1087 aaPredicted RBP8.24□□□□□ -1.09
TRAV40-201ENST00000390467 CTDSPL2Q05D32 466 aa8.23□□□□□ -1.09
TRAV40-201ENST00000390467 FOXJ1Q92949 421 aa8.23□□□□□ -1.09
TRAV40-201ENST00000390467 PPP2R2DQ66LE6 453 aa8.22□□□□□ -1.09
TRAV40-201ENST00000390467 ZNF787Q6DD87 383 aa8.22□□□□□ -1.09
TRAV40-201ENST00000390467 AXIN1O15169 862 aa8.21□□□□□ -1.1
TRAV40-201ENST00000390467 SMCPP49901 116 aaPredicted RBP8.21□□□□□ -1.1
TRAV40-201ENST00000390467 C4orf48Q5BLP8 95 aa8.21□□□□□ -1.1
TRAV40-201ENST00000390467 LRRN4Q8WUT4 740 aa8.21□□□□□ -1.1
TRAV40-201ENST00000390467 CTC1Q2NKJ3 1217 aa8.2□□□□□ -1.1
TRAV40-201ENST00000390467 IL27Q8NEV9 243 aa8.2□□□□□ -1.1
TRAV40-201ENST00000390467 VARSP26640 1264 aaKnown RBP8.19□□□□□ -1.1
TRAV40-201ENST00000390467 ATP1B4Q9UN42 357 aaPredicted RBP8.18□□□□□ -1.1
TRAV40-201ENST00000390467 AP1G2O75843 785 aa8.17□□□□□ -1.1
TRAV40-201ENST00000390467 GMPR2Q9P2T1 348 aaKnown RBP8.17□□□□□ -1.1
TRAV40-201ENST00000390467 RFC5P40937 340 aa8.16□□□□□ -1.1
TRAV40-201ENST00000390467 SH3BP5LQ7L8J4 393 aa8.16□□□□□ -1.1
TRAV40-201ENST00000390467 HMX1Q9NP08 348 aaPredicted RBP8.16□□□□□ -1.1
TRAV40-201ENST00000390467 WASF2Q9Y6W5 498 aa8.16□□□□□ -1.1
TRAV40-201ENST00000390467 USP17L8P0C7I0 530 aa8.15□□□□□ -1.1
TRAV40-201ENST00000390467 NR6A1Q15406 480 aa8.15□□□□□ -1.1
TRAV40-201ENST00000390467 SH3RF1Q7Z6J0 888 aa8.15□□□□□ -1.1
TRAV40-201ENST00000390467 FAM174AQ8TBP5 190 aa8.15□□□□□ -1.1
TRAV40-201ENST00000390467 C1QTNF2Q9BXJ5 285 aa8.15□□□□□ -1.1
TRAV40-201ENST00000390467 GOPCQ9HD26 462 aa8.15□□□□□ -1.1
TRAV40-201ENST00000390467 ATP13A2Q9NQ11 1180 aa8.15□□□□□ -1.1
TRAV40-201ENST00000390467 PRKCSHP14314 528 aaPredicted RBP8.14□□□□□ -1.11
TRAV40-201ENST00000390467 AGERQ15109 404 aa8.14□□□□□ -1.11
TRAV40-201ENST00000390467 NBPF14Q5TI25 921 aa8.14□□□□□ -1.11
TRAV40-201ENST00000390467 BPHLQ86WA6 291 aaPredicted RBP8.14□□□□□ -1.11
TRAV40-201ENST00000390467 MPNDQ8N594 471 aa8.14□□□□□ -1.11
TRAV40-201ENST00000390467 ARMC2Q8NEN0 867 aa8.14□□□□□ -1.11
TRAV40-201ENST00000390467 EPS8L1Q8TE68 723 aa8.14□□□□□ -1.11
TRAV40-201ENST00000390467 PCMTD1Q96MG8 357 aaPredicted RBP8.14□□□□□ -1.11
TRAV40-201ENST00000390467 ADH1CP00326 375 aa8.13□□□□□ -1.11
TRAV40-201ENST00000390467 BMP1P13497 986 aa8.13□□□□□ -1.11
TRAV40-201ENST00000390467 NNTQ13423 1086 aa8.13□□□□□ -1.11
TRAV40-201ENST00000390467 CDK15Q96Q40 435 aa8.13□□□□□ -1.11
TRAV40-201ENST00000390467 CARD14Q9BXL6 1004 aa8.13□□□□□ -1.11
TRAV40-201ENST00000390467 MAGEB6P1A0A0J9YX57 407 aa8.12□□□□□ -1.11
TRAV40-201ENST00000390467 NR3C2P08235 984 aa8.12□□□□□ -1.11
TRAV40-201ENST00000390467 ARID5BQ14865 1188 aa8.12□□□□□ -1.11
TRAV40-201ENST00000390467 ZNF775Q96BV0 537 aaPredicted RBP8.12□□□□□ -1.11
TRAV40-201ENST00000390467 FKBPLQ9UIM3 349 aa8.12□□□□□ -1.11
TRAV40-201ENST00000390467 CAPN5O15484 640 aaPredicted RBP8.1□□□□□ -1.11
TRAV40-201ENST00000390467 ERFEQ4G0M1 354 aa8.1□□□□□ -1.11
TRAV40-201ENST00000390467 TRIM46Q7Z4K8 759 aa8.1□□□□□ -1.11
TRAV40-201ENST00000390467 GPKOWQ92917 476 aaPredicted RBP eCLIP8.1□□□□□ -1.11
TRAV40-201ENST00000390467 OCSTAMPQ9BR26 566 aa8.1□□□□□ -1.11
TRAV40-201ENST00000390467 C11orf95C9JLR9 678 aaPredicted RBP8.09□□□□□ -1.11
TRAV40-201ENST00000390467 SNRPBP14678 240 aaKnown RBP8.09□□□□□ -1.11
TRAV40-201ENST00000390467 TIMP2P16035 220 aa8.09□□□□□ -1.11
TRAV40-201ENST00000390467 GRM5P41594 1212 aa8.09□□□□□ -1.11
TRAV40-201ENST00000390467 TRMT44Q8IYL2 757 aaKnown RBP8.09□□□□□ -1.11
TRAV40-201ENST00000390467 KLF16Q9BXK1 252 aaPredicted RBP8.09□□□□□ -1.11
TRAV40-201ENST00000390467 FSHRP23945 695 aa8.08□□□□□ -1.12
TRAV40-201ENST00000390467 TRIM34Q9BYJ4 488 aa8.08□□□□□ -1.12
TRAV40-201ENST00000390467 WDR4P57081 412 aaKnown RBP8.07□□□□□ -1.12
TRAV40-201ENST00000390467 PDXDC2PQ6P474 469 aa8.07□□□□□ -1.12
TRAV40-201ENST00000390467 TRIM47Q96LD4 638 aa8.07□□□□□ -1.12
TRAV40-201ENST00000390467 ARHGAP9Q9BRR9 750 aa8.07□□□□□ -1.12
TRAV40-201ENST00000390467 ZFAND3Q9H8U3 227 aa8.07□□□□□ -1.12
TRAV40-201ENST00000390467 MAP4K5Q9Y4K4 846 aa8.07□□□□□ -1.12
TRAV40-201ENST00000390467 ZC3H4Q9UPT8 1303 aaKnown RBP8.06□□□□□ -1.12
TRAV40-201ENST00000390467 NR5A1Q13285 461 aa8.05□□□□□ -1.12
TRAV40-201ENST00000390467 VASH1Q7L8A9 365 aaPredicted RBP8.05□□□□□ -1.12
TRAV40-201ENST00000390467 ITPKCQ96DU7 683 aa8.05□□□□□ -1.12
TRAV40-201ENST00000390467 GJD4Q96KN9 370 aaPredicted RBP8.05□□□□□ -1.12
TRAV40-201ENST00000390467 ZIC2O95409 532 aaPredicted RBP8.04□□□□□ -1.12
TRAV40-201ENST00000390467 TMEM259Q4ZIN3 620 aa8.04□□□□□ -1.12
TRAV40-201ENST00000390467 ADAM32Q8TC27 787 aa8.03□□□□□ -1.12
TRAV40-201ENST00000390467 SENP2Q9HC62 589 aa8.03□□□□□ -1.12
TRAV40-201ENST00000390467 MRPL14Q6P1L8 145 aaKnown RBP8.02□□□□□ -1.13
TRAV40-201ENST00000390467 SLC10A4Q96EP9 437 aa8.02□□□□□ -1.13
TRAV40-201ENST00000390467 GPR37L1O60883 481 aa8.01□□□□□ -1.13
TRAV40-201ENST00000390467 PTK2Q05397 1052 aa8.01□□□□□ -1.13
TRAV40-201ENST00000390467 LCE2AQ5TA79 106 aaPredicted RBP8.01□□□□□ -1.13
TRAV40-201ENST00000390467 ZBTB33Q86T24 672 aa8.01□□□□□ -1.13
TRAV40-201ENST00000390467 KIFC2Q96AC6 838 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms