RNA–Protein interactions for RNA: ENST00000390436.2

TRAV13-1-201, Transcript of T cell receptor alpha variable 13-1, humanhuman

APPRIS P1 BASIC

Gene TRAV13-1, Length 360 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1-201ENST00000390436 RASEFQ8IZ41 740 aa10.1□□□□□ -0.79
TRAV13-1-201ENST00000390436 PIP4P2Q8N4L2 257 aa10.1□□□□□ -0.79
TRAV13-1-201ENST00000390436 FARP1Q9Y4F1 1045 aaPredicted RBP10.1□□□□□ -0.79
TRAV13-1-201ENST00000390436 NRAPQ86VF7 1730 aa10.1□□□□□ -0.79
TRAV13-1-201ENST00000390436 GJD4Q96KN9 370 aaPredicted RBP10.09□□□□□ -0.79
TRAV13-1-201ENST00000390436 CRYBG1Q9Y4K1 1723 aa10.09□□□□□ -0.79
TRAV13-1-201ENST00000390436 HFM1A2PYH4 1435 aa10.08□□□□□ -0.8
TRAV13-1-201ENST00000390436 TECPR2O15040 1411 aa10.08□□□□□ -0.8
TRAV13-1-201ENST00000390436 TRPM3Q9HCF6 1732 aaPredicted RBP10.08□□□□□ -0.8
TRAV13-1-201ENST00000390436 FAM212AQ96EL1 285 aa10.08□□□□□ -0.8
TRAV13-1-201ENST00000390436 SPATA31A3Q5VYP0 1347 aa10.07□□□□□ -0.8
TRAV13-1-201ENST00000390436 RGL2O15211 777 aa10.07□□□□□ -0.8
TRAV13-1-201ENST00000390436 VGFO15240 615 aaPredicted RBP10.07□□□□□ -0.8
TRAV13-1-201ENST00000390436 RGL3Q3MIN7 710 aa10.07□□□□□ -0.8
TRAV13-1-201ENST00000390436 LRPPRCP42704 1394 aaKnown RBP10.06□□□□□ -0.8
TRAV13-1-201ENST00000390436 FAM182BQ5T319 152 aa10.06□□□□□ -0.8
TRAV13-1-201ENST00000390436 DCAF8Q5TAQ9 597 aa10.06□□□□□ -0.8
TRAV13-1-201ENST00000390436 NPHP3Q7Z494 1330 aa10.06□□□□□ -0.8
TRAV13-1-201ENST00000390436 NWD2Q9ULI1 1742 aa10.05□□□□□ -0.8
TRAV13-1-201ENST00000390436 UNC5CLQ8IV45 518 aa10.05□□□□□ -0.8
TRAV13-1-201ENST00000390436 PIK3C2GO75747 1445 aa10.05□□□□□ -0.8
TRAV13-1-201ENST00000390436 KIF1AQ12756 1690 aa10.05□□□□□ -0.8
TRAV13-1-201ENST00000390436 ALS2Q96Q42 1657 aa10.05□□□□□ -0.8
TRAV13-1-201ENST00000390436 TNS1Q9HBL0 1735 aaKnown RBP10.04□□□□□ -0.8
TRAV13-1-201ENST00000390436 ABCC11Q96J66 1382 aa10.04□□□□□ -0.8
TRAV13-1-201ENST00000390436 PSDA5PKW4 1024 aaPredicted RBP10.04□□□□□ -0.8
TRAV13-1-201ENST00000390436 KRT28Q7Z3Y7 464 aa10.04□□□□□ -0.8
TRAV13-1-201ENST00000390436 SEPT12Q8IYM1 358 aa10.04□□□□□ -0.8
TRAV13-1-201ENST00000390436 ZRANB1Q9UGI0 708 aa10.04□□□□□ -0.8
TRAV13-1-201ENST00000390436 YTHDC2Q9H6S0 1430 aaKnown RBP10.04□□□□□ -0.8
TRAV13-1-201ENST00000390436 RPGRIP1LQ68CZ1 1315 aa10.04□□□□□ -0.8
TRAV13-1-201ENST00000390436 LRP5O75197 1615 aa10.04□□□□□ -0.8
TRAV13-1-201ENST00000390436 FAM83GA6ND36 823 aa10.03□□□□□ -0.8
TRAV13-1-201ENST00000390436 PRR36Q9H6K5 1346 aa10.03□□□□□ -0.8
TRAV13-1-201ENST00000390436 BLMP54132 1417 aaPredicted RBP10.02□□□□□ -0.81
TRAV13-1-201ENST00000390436 SAFB2Q14151 953 aaKnown RBP eCLIP10.02□□□□□ -0.81
TRAV13-1-201ENST00000390436 CFAP70Q5T0N1 1121 aa10.02□□□□□ -0.81
TRAV13-1-201ENST00000390436 NRXN1Q9ULB1 1477 aa10.02□□□□□ -0.81
TRAV13-1-201ENST00000390436 TNS3Q68CZ2 1445 aa10.01□□□□□ -0.81
TRAV13-1-201ENST00000390436 ONECUT3O60422 494 aaPredicted RBP10.01□□□□□ -0.81
TRAV13-1-201ENST00000390436 PMFBP1Q8TBY8 1022 aa10.01□□□□□ -0.81
TRAV13-1-201ENST00000390436 THSD7AQ9UPZ6 1657 aa10□□□□□ -0.81
TRAV13-1-201ENST00000390436 VPS72Q15906 364 aa10□□□□□ -0.81
TRAV13-1-201ENST00000390436 RNF25Q96BH1 459 aaPredicted RBP10□□□□□ -0.81
TRAV13-1-201ENST00000390436 ADGRB1O14514 1584 aa10□□□□□ -0.81
TRAV13-1-201ENST00000390436 PHF8Q9UPP1 1060 aa9.99□□□□□ -0.81
TRAV13-1-201ENST00000390436 HRCP23327 699 aa9.98□□□□□ -0.81
TRAV13-1-201ENST00000390436 EN1Q05925 392 aaPredicted RBP9.98□□□□□ -0.81
TRAV13-1-201ENST00000390436 MPHOSPH9Q99550 1183 aa9.98□□□□□ -0.81
TRAV13-1-201ENST00000390436 C14orf93Q9H972 538 aaKnown RBP9.98□□□□□ -0.81
TRAV13-1-201ENST00000390436 CCDC144AA2RUR9 1427 aa9.98□□□□□ -0.81
TRAV13-1-201ENST00000390436 FAM98CQ17RN3 349 aaKnown RBP9.97□□□□□ -0.81
TRAV13-1-201ENST00000390436 CCDC125Q86Z20 511 aa9.97□□□□□ -0.81
TRAV13-1-201ENST00000390436 PRAM1Q96QH2 718 aa9.97□□□□□ -0.81
TRAV13-1-201ENST00000390436 HIRIP3Q9BW71 556 aaPredicted RBP9.97□□□□□ -0.81
TRAV13-1-201ENST00000390436 ADGRB2O60241 1585 aa9.97□□□□□ -0.81
TRAV13-1-201ENST00000390436 RGPD1P0DJD0 1748 aa9.96□□□□□ -0.81
TRAV13-1-201ENST00000390436 COL14A1Q05707 1796 aaKnown RBP9.96□□□□□ -0.81
TRAV13-1-201ENST00000390436 CHRM1P11229 460 aaPredicted RBP9.96□□□□□ -0.82
TRAV13-1-201ENST00000390436 KRT27Q7Z3Y8 459 aa9.96□□□□□ -0.82
TRAV13-1-201ENST00000390436 TSPYL2Q9H2G4 693 aaPredicted RBP9.96□□□□□ -0.82
TRAV13-1-201ENST00000390436 PHRF1Q9P1Y6 1649 aaKnown RBP9.96□□□□□ -0.82
TRAV13-1-201ENST00000390436 LMOD2Q6P5Q4 547 aa9.95□□□□□ -0.82
TRAV13-1-201ENST00000390436 SBNO1A3KN83 1393 aa9.95□□□□□ -0.82
TRAV13-1-201ENST00000390436 ANKRD30BQ9BXX2 1392 aa9.95□□□□□ -0.82
TRAV13-1-201ENST00000390436 RREB1Q92766 1687 aa9.95□□□□□ -0.82
TRAV13-1-201ENST00000390436 NUP188Q5SRE5 1749 aa9.95□□□□□ -0.82
TRAV13-1-201ENST00000390436 ARHGEF28Q8N1W1 1705 aaKnown RBP9.94□□□□□ -0.82
TRAV13-1-201ENST00000390436 R3HDM1Q15032 1099 aaKnown RBP9.94□□□□□ -0.82
TRAV13-1-201ENST00000390436 BTG4Q9NY30 223 aa9.94□□□□□ -0.82
TRAV13-1-201ENST00000390436 DLC1Q96QB1 1528 aa9.93□□□□□ -0.82
TRAV13-1-201ENST00000390436 SPATA31A5Q5VU36 1347 aa9.93□□□□□ -0.82
TRAV13-1-201ENST00000390436 SPATA31A7Q8IWB4 1347 aa9.93□□□□□ -0.82
TRAV13-1-201ENST00000390436 MINK1Q8N4C8 1332 aaPredicted RBP9.93□□□□□ -0.82
TRAV13-1-201ENST00000390436 SLC24A1O60721 1099 aa9.93□□□□□ -0.82
TRAV13-1-201ENST00000390436 PYGBP11216 843 aa9.93□□□□□ -0.82
TRAV13-1-201ENST00000390436 EZH2Q15910 746 aaKnown RBP9.93□□□□□ -0.82
TRAV13-1-201ENST00000390436 SIRT1Q96EB6 747 aa9.93□□□□□ -0.82
TRAV13-1-201ENST00000390436 CCDC9Q9Y3X0 531 aaKnown RBP9.93□□□□□ -0.82
TRAV13-1-201ENST00000390436 CHRNA2Q15822 529 aa9.92□□□□□ -0.82
TRAV13-1-201ENST00000390436 CCDC61Q9Y6R9 512 aa9.92□□□□□ -0.82
TRAV13-1-201ENST00000390436 CAMTA1Q9Y6Y1 1673 aa9.92□□□□□ -0.82
TRAV13-1-201ENST00000390436 SBF2Q86WG5 1849 aa9.91□□□□□ -0.82
TRAV13-1-201ENST00000390436 ACIN1Q9UKV3 1341 aaKnown RBP9.91□□□□□ -0.82
TRAV13-1-201ENST00000390436 TOPAZ1Q8N9V7 1692 aa9.91□□□□□ -0.82
TRAV13-1-201ENST00000390436 RIOK3O14730 519 aaKnown RBP9.91□□□□□ -0.82
TRAV13-1-201ENST00000390436 NUTM2GQ5VZR2 741 aa9.91□□□□□ -0.82
TRAV13-1-201ENST00000390436 PTF1AQ7RTS3 328 aa9.91□□□□□ -0.82
TRAV13-1-201ENST00000390436 CAMKK2Q96RR4 588 aa9.91□□□□□ -0.82
TRAV13-1-201ENST00000390436 TRAK1Q9UPV9 953 aa9.91□□□□□ -0.82
TRAV13-1-201ENST00000390436 LMO7Q8WWI1 1683 aa9.9□□□□□ -0.82
TRAV13-1-201ENST00000390436 PSME1Q06323 249 aa9.9□□□□□ -0.82
TRAV13-1-201ENST00000390436 TULP4Q9NRJ4 1543 aa9.9□□□□□ -0.82
TRAV13-1-201ENST00000390436 ATP7BP35670 1465 aa9.9□□□□□ -0.83
TRAV13-1-201ENST00000390436 ANKARQ7Z5J8 1434 aa9.9□□□□□ -0.83
TRAV13-1-201ENST00000390436 DHX57Q6P158 1386 aaKnown RBP9.89□□□□□ -0.83
TRAV13-1-201ENST00000390436 RGPD5Q99666 1765 aa9.89□□□□□ -0.83
TRAV13-1-201ENST00000390436 TRIM37O94972 964 aa9.89□□□□□ -0.83
TRAV13-1-201ENST00000390436 HAP1P54257 671 aaPredicted RBP9.89□□□□□ -0.83
TRAV13-1-201ENST00000390436 DISP2A7MBM2 1401 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms