RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 PIBF1Q8WXW3 757 aa6.03□□□□□ -1.44
LTN1-202ENST00000389194 MVPQ14764 893 aaKnown RBP6.03□□□□□ -1.44
LTN1-202ENST00000389194 SASS6Q6UVJ0 657 aa6.03□□□□□ -1.44
LTN1-202ENST00000389194 FERMT3Q86UX7 667 aa6.03□□□□□ -1.44
LTN1-202ENST00000389194 OSCARQ8IYS5 282 aa6.03□□□□□ -1.44
LTN1-202ENST00000389194 FAM177A1Q8N128 213 aaPredicted RBP6.03□□□□□ -1.44
LTN1-202ENST00000389194 RAPGEF4Q8WZA2 1011 aa6.03□□□□□ -1.44
LTN1-202ENST00000389194 GDPD2Q9HCC8 539 aa6.03□□□□□ -1.44
LTN1-202ENST00000389194 NAIPQ13075 1403 aa6.03□□□□□ -1.44
LTN1-202ENST00000389194 DTNBO60941 627 aa6.03□□□□□ -1.44
LTN1-202ENST00000389194 IGHDP01880 384 aa6.03□□□□□ -1.44
LTN1-202ENST00000389194 BRPF1P55201 1214 aaPredicted RBP6.03□□□□□ -1.44
LTN1-202ENST00000389194 HDGFL1Q5TGJ6 251 aa6.03□□□□□ -1.44
LTN1-202ENST00000389194 SSH1Q8WYL5 1049 aa6.03□□□□□ -1.44
LTN1-202ENST00000389194 ZBTB9Q96C00 473 aa6.03□□□□□ -1.44
LTN1-202ENST00000389194 ATP6V1DQ9Y5K8 247 aa6.03□□□□□ -1.44
LTN1-202ENST00000389194 DHX37Q8IY37 1157 aaKnown RBP6.03□□□□□ -1.44
LTN1-202ENST00000389194 KIAA1107Q9UPP5 1409 aa6.03□□□□□ -1.44
LTN1-202ENST00000389194 TPM3P06753 285 aa6.03□□□□□ -1.44
LTN1-202ENST00000389194 NUCB2P80303 420 aa6.03□□□□□ -1.44
LTN1-202ENST00000389194 CHD1LQ86WJ1 897 aa6.03□□□□□ -1.44
LTN1-202ENST00000389194 SDF4Q9BRK5 362 aa6.03□□□□□ -1.44
LTN1-202ENST00000389194 RBM42Q9BTD8 480 aaKnown RBP6.03□□□□□ -1.44
LTN1-202ENST00000389194 FAM83GA6ND36 823 aa6.03□□□□□ -1.44
LTN1-202ENST00000389194 SLFN5Q08AF3 891 aa6.03□□□□□ -1.44
LTN1-202ENST00000389194 JARID2Q92833 1246 aaPredicted RBP6.03□□□□□ -1.44
LTN1-202ENST00000389194 ERBINQ96RT1 1412 aa6.03□□□□□ -1.44
LTN1-202ENST00000389194 TRIM5Q9C035 493 aa6.02□□□□□ -1.45
LTN1-202ENST00000389194 TIAM1Q13009 1591 aa6.02□□□□□ -1.45
LTN1-202ENST00000389194 MRE11P49959 708 aa6.02□□□□□ -1.45
LTN1-202ENST00000389194 ZC3H6P61129 1189 aaKnown RBP6.02□□□□□ -1.45
LTN1-202ENST00000389194 SYNE3Q6ZMZ3 975 aa6.02□□□□□ -1.45
LTN1-202ENST00000389194 CLASRPQ8N2M8 674 aaKnown RBP6.02□□□□□ -1.45
LTN1-202ENST00000389194 SMG6Q86US8 1419 aaKnown RBP6.02□□□□□ -1.45
LTN1-202ENST00000389194 TMPOP42166 694 aaKnown RBP6.02□□□□□ -1.45
LTN1-202ENST00000389194 CAMK4Q16566 473 aa6.02□□□□□ -1.45
LTN1-202ENST00000389194 DDX11Q96FC9 970 aa6.02□□□□□ -1.45
LTN1-202ENST00000389194 PRXQ9BXM0 1461 aa6.02□□□□□ -1.45
LTN1-202ENST00000389194 TRIM29Q14134 588 aa6.02□□□□□ -1.45
LTN1-202ENST00000389194 EMILIN1Q9Y6C2 1016 aa6.02□□□□□ -1.45
LTN1-202ENST00000389194 HFM1A2PYH4 1435 aa6.01□□□□□ -1.45
LTN1-202ENST00000389194 DDX58O95786 925 aaKnown RBP6.01□□□□□ -1.45
LTN1-202ENST00000389194 TRDNQ13061 729 aa6.01□□□□□ -1.45
LTN1-202ENST00000389194 HDAC5Q9UQL6 1122 aa6.01□□□□□ -1.45
LTN1-202ENST00000389194 NSD3Q9BZ95 1437 aa6.01□□□□□ -1.45
LTN1-202ENST00000389194 KLHL34Q8N239 644 aa6.01□□□□□ -1.45
LTN1-202ENST00000389194 KIF3AQ9Y496 699 aa6.01□□□□□ -1.45
LTN1-202ENST00000389194 SRGAP3O43295 1099 aa6.01□□□□□ -1.45
LTN1-202ENST00000389194 PDE3AQ14432 1141 aa6.01□□□□□ -1.45
LTN1-202ENST00000389194 SYCE3A1L190 88 aa6.01□□□□□ -1.45
LTN1-202ENST00000389194 ANXA1P04083 346 aa6.01□□□□□ -1.45
LTN1-202ENST00000389194 GNAI2P04899 355 aa6.01□□□□□ -1.45
LTN1-202ENST00000389194 NME9Q86XW9 330 aa6.01□□□□□ -1.45
LTN1-202ENST00000389194 GRPEL1Q9HAV7 217 aa6.01□□□□□ -1.45
LTN1-202ENST00000389194 ARHGEF11O15085 1522 aa6.01□□□□□ -1.45
LTN1-202ENST00000389194 MCM4P33991 863 aa6.01□□□□□ -1.45
LTN1-202ENST00000389194 RNF20Q5VTR2 975 aa6.01□□□□□ -1.45
LTN1-202ENST00000389194 DAPK1P53355 1430 aa6.01□□□□□ -1.45
LTN1-202ENST00000389194 FKBP4Q02790 459 aaKnown RBP eCLIP6.01□□□□□ -1.45
LTN1-202ENST00000389194 RALYLQ86SE5 291 aaKnown RBP6.01□□□□□ -1.45
LTN1-202ENST00000389194 CNTROBQ8N137 903 aa6.01□□□□□ -1.45
LTN1-202ENST00000389194 MIA2Q96PC5 1412 aa6.01□□□□□ -1.45
LTN1-202ENST00000389194 ADGRF5Q8IZF2 1346 aa6.01□□□□□ -1.45
LTN1-202ENST00000389194 SMC2O95347 1197 aa6□□□□□ -1.45
LTN1-202ENST00000389194 GOLGA6L1Q8N7Z2 621 aa6□□□□□ -1.45
LTN1-202ENST00000389194 FBXO31Q5XUX0 539 aaPredicted RBP6□□□□□ -1.45
LTN1-202ENST00000389194 CCDC73Q6ZRK6 1079 aa6□□□□□ -1.45
LTN1-202ENST00000389194 K7ELQ4 463 aaPredicted RBP6□□□□□ -1.45
LTN1-202ENST00000389194 CCDC30Q5VVM6 783 aa6□□□□□ -1.45
LTN1-202ENST00000389194 ERC2O15083 957 aa6□□□□□ -1.45
LTN1-202ENST00000389194 RARSP54136 660 aaKnown RBP6□□□□□ -1.45
LTN1-202ENST00000389194 TMX4Q9H1E5 349 aaPredicted RBP6□□□□□ -1.45
LTN1-202ENST00000389194 PRDM10Q9NQV6 1147 aa6□□□□□ -1.45
LTN1-202ENST00000389194 SSFA2P28290 1259 aa6□□□□□ -1.45
LTN1-202ENST00000389194 GUCY1B3Q02153 619 aa6□□□□□ -1.45
LTN1-202ENST00000389194 PCF11O94913 1555 aaKnown RBP6□□□□□ -1.45
LTN1-202ENST00000389194 NAP1L1P55209 391 aaKnown RBP5.99□□□□□ -1.45
LTN1-202ENST00000389194 AACSQ86V21 672 aa5.99□□□□□ -1.45
LTN1-202ENST00000389194 POLA1P09884 1462 aaPredicted RBP5.99□□□□□ -1.45
LTN1-202ENST00000389194 PTCD1O75127 700 aaKnown RBP5.99□□□□□ -1.45
LTN1-202ENST00000389194 ZNF530Q6P9A1 599 aaPredicted RBP5.99□□□□□ -1.45
LTN1-202ENST00000389194 TBC1D2Q9BYX2 928 aa5.99□□□□□ -1.45
LTN1-202ENST00000389194 LRRCC1Q9C099 1032 aa5.99□□□□□ -1.45
LTN1-202ENST00000389194 TSR1Q2NL82 804 aaKnown RBP5.99□□□□□ -1.45
LTN1-202ENST00000389194 CPLX2Q6PUV4 134 aaKnown RBP5.99□□□□□ -1.45
LTN1-202ENST00000389194 RAB11FIP4Q86YS3 637 aa5.99□□□□□ -1.45
LTN1-202ENST00000389194 CCDC82Q8N4S0 544 aa5.99□□□□□ -1.45
LTN1-202ENST00000389194 CCDC34Q96HJ3 373 aa5.99□□□□□ -1.45
LTN1-202ENST00000389194 JAKMIP1Q96N16 626 aaKnown RBP5.99□□□□□ -1.45
LTN1-202ENST00000389194 TSPY26PQ9H489 355 aa5.99□□□□□ -1.45
LTN1-202ENST00000389194 PRM3Q9NNZ6 103 aa5.99□□□□□ -1.45
LTN1-202ENST00000389194 RBM27Q9P2N5 1060 aaKnown RBP5.99□□□□□ -1.45
LTN1-202ENST00000389194 DUSP27Q5VZP5 1158 aa5.99□□□□□ -1.45
LTN1-202ENST00000389194 PLB1Q6P1J6 1458 aa5.98□□□□□ -1.45
LTN1-202ENST00000389194 ATF3P18847 181 aa5.98□□□□□ -1.45
LTN1-202ENST00000389194 CEBPAP49715 358 aaPredicted RBP5.98□□□□□ -1.45
LTN1-202ENST00000389194 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.98□□□□□ -1.45
LTN1-202ENST00000389194 ROCK1Q13464 1354 aa5.98□□□□□ -1.45
LTN1-202ENST00000389194 DISP3Q9P2K9 1392 aa5.98□□□□□ -1.45
LTN1-202ENST00000389194 TRIM27P14373 513 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms