RNA–Protein interactions for RNA: ENST00000387416.2

MT-TS1-201, Transcript of mitochondrially encoded tRNA serine 1 (UCN), humanhuman

BASIC

Gene MT-TS1, Length 69 nt, Biotype Mt tRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MT-TS1-201ENST00000387416 CABP2Q9NPB3 220 aa12.03□□□□□ -0.48
MT-TS1-201ENST00000387416 MARF1Q9Y4F3 1742 aaKnown RBP12.01□□□□□ -0.49
MT-TS1-201ENST00000387416 UNC5CLQ8IV45 518 aa12.01□□□□□ -0.49
MT-TS1-201ENST00000387416 CABP1Q9NZU7 370 aa12.01□□□□□ -0.49
MT-TS1-201ENST00000387416 ATAD2Q6PL18 1390 aa12.01□□□□□ -0.49
MT-TS1-201ENST00000387416 PPIP5K1Q6PFW1 1433 aa12.01□□□□□ -0.49
MT-TS1-201ENST00000387416 TOPAZ1Q8N9V7 1692 aa12□□□□□ -0.49
MT-TS1-201ENST00000387416 TRPM3Q9HCF6 1732 aaPredicted RBP12□□□□□ -0.49
MT-TS1-201ENST00000387416 CABLES1Q8TDN4 633 aa12□□□□□ -0.49
MT-TS1-201ENST00000387416 NLRP13Q86W25 1043 aa11.99□□□□□ -0.49
MT-TS1-201ENST00000387416 CCER1Q8TC90 406 aaPredicted RBP11.99□□□□□ -0.49
MT-TS1-201ENST00000387416 ALS2Q96Q42 1657 aa11.99□□□□□ -0.49
MT-TS1-201ENST00000387416 SLIT2O94813 1529 aa11.98□□□□□ -0.49
MT-TS1-201ENST00000387416 BCL9LQ86UU0 1499 aa11.98□□□□□ -0.49
MT-TS1-201ENST00000387416 ATRNO75882 1429 aa11.98□□□□□ -0.49
MT-TS1-201ENST00000387416 ABTB2Q8N961 1025 aa11.98□□□□□ -0.49
MT-TS1-201ENST00000387416 GJD4Q96KN9 370 aaPredicted RBP11.97□□□□□ -0.49
MT-TS1-201ENST00000387416 FAM83GA6ND36 823 aa11.96□□□□□ -0.49
MT-TS1-201ENST00000387416 VPS72Q15906 364 aa11.96□□□□□ -0.49
MT-TS1-201ENST00000387416 USP6P35125 1406 aa11.95□□□□□ -0.5
MT-TS1-201ENST00000387416 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.95□□□□□ -0.5
MT-TS1-201ENST00000387416 ST20-MTHFSA0A0A6YYL1 179 aa11.95□□□□□ -0.5
MT-TS1-201ENST00000387416 CDCA8Q53HL2 280 aa11.95□□□□□ -0.5
MT-TS1-201ENST00000387416 PRDM11Q9NQV5 511 aa11.95□□□□□ -0.5
MT-TS1-201ENST00000387416 TERF2IPQ9NYB0 399 aa11.95□□□□□ -0.5
MT-TS1-201ENST00000387416 NWD2Q9ULI1 1742 aa11.94□□□□□ -0.5
MT-TS1-201ENST00000387416 NINLQ9Y2I6 1382 aa11.94□□□□□ -0.5
MT-TS1-201ENST00000387416 TTC21AQ8NDW8 1320 aa11.94□□□□□ -0.5
MT-TS1-201ENST00000387416 PLEKHG5O94827 1062 aa11.94□□□□□ -0.5
MT-TS1-201ENST00000387416 ABCA3Q99758 1704 aa11.94□□□□□ -0.5
MT-TS1-201ENST00000387416 USP19O94966 1318 aa11.93□□□□□ -0.5
MT-TS1-201ENST00000387416 NLRP6P59044 892 aa11.93□□□□□ -0.5
MT-TS1-201ENST00000387416 HDGFL2Q7Z4V5 671 aaPredicted RBP11.93□□□□□ -0.5
MT-TS1-201ENST00000387416 TESK2Q96S53 571 aa11.93□□□□□ -0.5
MT-TS1-201ENST00000387416 BTG4Q9NY30 223 aa11.93□□□□□ -0.5
MT-TS1-201ENST00000387416 CPSF1Q10570 1443 aaKnown RBP11.93□□□□□ -0.5
MT-TS1-201ENST00000387416 KTN1Q86UP2 1357 aaKnown RBP11.92□□□□□ -0.5
MT-TS1-201ENST00000387416 COL14A1Q05707 1796 aaKnown RBP11.92□□□□□ -0.5
MT-TS1-201ENST00000387416 TTC21BQ7Z4L5 1316 aa11.92□□□□□ -0.5
MT-TS1-201ENST00000387416 GCP02774 474 aa11.92□□□□□ -0.5
MT-TS1-201ENST00000387416 TMF1P82094 1093 aa11.92□□□□□ -0.5
MT-TS1-201ENST00000387416 NUTM2GQ5VZR2 741 aa11.92□□□□□ -0.5
MT-TS1-201ENST00000387416 TMC1Q8TDI8 760 aa11.92□□□□□ -0.5
MT-TS1-201ENST00000387416 SSH2Q76I76 1423 aa11.92□□□□□ -0.5
MT-TS1-201ENST00000387416 CPDO75976 1380 aa11.92□□□□□ -0.5
MT-TS1-201ENST00000387416 USP47Q96K76 1375 aa11.92□□□□□ -0.5
MT-TS1-201ENST00000387416 ONECUT3O60422 494 aaPredicted RBP11.91□□□□□ -0.5
MT-TS1-201ENST00000387416 KCNH5Q8NCM2 988 aa11.91□□□□□ -0.5
MT-TS1-201ENST00000387416 CCDC9Q9Y3X0 531 aaKnown RBP11.91□□□□□ -0.5
MT-TS1-201ENST00000387416 RGS12O14924 1447 aa11.91□□□□□ -0.5
MT-TS1-201ENST00000387416 KIAA0232Q92628 1395 aa11.91□□□□□ -0.5
MT-TS1-201ENST00000387416 ZC3H6P61129 1189 aaKnown RBP11.9□□□□□ -0.5
MT-TS1-201ENST00000387416 CRYBG1Q9Y4K1 1723 aa11.9□□□□□ -0.5
MT-TS1-201ENST00000387416 PLCH1Q4KWH8 1693 aa11.9□□□□□ -0.5
MT-TS1-201ENST00000387416 EVA1CP58658 441 aa11.89□□□□□ -0.51
MT-TS1-201ENST00000387416 UPF1Q92900 1129 aaKnown RBP eCLIP11.89□□□□□ -0.51
MT-TS1-201ENST00000387416 SLC12A5Q9H2X9 1139 aa11.89□□□□□ -0.51
MT-TS1-201ENST00000387416 AKAP12Q02952 1782 aa11.89□□□□□ -0.51
MT-TS1-201ENST00000387416 CCDC125Q86Z20 511 aa11.88□□□□□ -0.51
MT-TS1-201ENST00000387416 SPATA31A5Q5VU36 1347 aa11.87□□□□□ -0.51
MT-TS1-201ENST00000387416 SPATA31A7Q8IWB4 1347 aa11.87□□□□□ -0.51
MT-TS1-201ENST00000387416 EDC4Q6P2E9 1401 aaKnown RBP11.87□□□□□ -0.51
MT-TS1-201ENST00000387416 PHRF1Q9P1Y6 1649 aaKnown RBP11.87□□□□□ -0.51
MT-TS1-201ENST00000387416 CHRNA2Q15822 529 aa11.87□□□□□ -0.51
MT-TS1-201ENST00000387416 SEPT12Q8IYM1 358 aa11.87□□□□□ -0.51
MT-TS1-201ENST00000387416 USP31Q70CQ4 1352 aa11.87□□□□□ -0.51
MT-TS1-201ENST00000387416 EIF4G2P78344 907 aaKnown RBP eCLIP11.86□□□□□ -0.51
MT-TS1-201ENST00000387416 AATKQ6ZMQ8 1374 aa11.86□□□□□ -0.51
MT-TS1-201ENST00000387416 SLIT3O75094 1523 aa11.86□□□□□ -0.51
MT-TS1-201ENST00000387416 GLI3P10071 1580 aa11.85□□□□□ -0.51
MT-TS1-201ENST00000387416 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.85□□□□□ -0.51
MT-TS1-201ENST00000387416 MON2Q7Z3U7 1717 aa11.85□□□□□ -0.51
MT-TS1-201ENST00000387416 NRAPQ86VF7 1730 aa11.85□□□□□ -0.51
MT-TS1-201ENST00000387416 SPATA31A1Q5TZJ5 1347 aa11.85□□□□□ -0.51
MT-TS1-201ENST00000387416 NRKQ7Z2Y5 1582 aa11.84□□□□□ -0.51
MT-TS1-201ENST00000387416 CD163L1Q9NR16 1453 aa11.84□□□□□ -0.51
MT-TS1-201ENST00000387416 ARHGEF25Q86VW2 580 aa11.84□□□□□ -0.51
MT-TS1-201ENST00000387416 STRN4Q9NRL3 753 aa11.84□□□□□ -0.51
MT-TS1-201ENST00000387416 THRAP3Q9Y2W1 955 aaKnown RBP11.84□□□□□ -0.51
MT-TS1-201ENST00000387416 PIK3C2AO00443 1686 aa11.84□□□□□ -0.51
MT-TS1-201ENST00000387416 A0A1W2PP64 1363 aa11.83□□□□□ -0.52
MT-TS1-201ENST00000387416 ANKRD36BQ8N2N9 1353 aa11.83□□□□□ -0.52
MT-TS1-201ENST00000387416 FAM98CQ17RN3 349 aaKnown RBP11.83□□□□□ -0.52
MT-TS1-201ENST00000387416 BARGINQ6ZT62 677 aa11.83□□□□□ -0.52
MT-TS1-201ENST00000387416 KRT27Q7Z3Y8 459 aa11.83□□□□□ -0.52
MT-TS1-201ENST00000387416 CAMTA1Q9Y6Y1 1673 aa11.82□□□□□ -0.52
MT-TS1-201ENST00000387416 A0A0G2JS52 829 aa11.82□□□□□ -0.52
MT-TS1-201ENST00000387416 MYT1Q01538 1121 aa11.82□□□□□ -0.52
MT-TS1-201ENST00000387416 TCP11L2Q8N4U5 519 aa11.82□□□□□ -0.52
MT-TS1-201ENST00000387416 ZBTB7CA1YPR0 619 aa11.81□□□□□ -0.52
MT-TS1-201ENST00000387416 C11orf95C9JLR9 678 aaPredicted RBP11.81□□□□□ -0.52
MT-TS1-201ENST00000387416 NME9Q86XW9 330 aa11.81□□□□□ -0.52
MT-TS1-201ENST00000387416 COG3Q96JB2 828 aa11.81□□□□□ -0.52
MT-TS1-201ENST00000387416 USP54Q70EL1 1684 aa11.81□□□□□ -0.52
MT-TS1-201ENST00000387416 LMO7Q8WWI1 1683 aa11.81□□□□□ -0.52
MT-TS1-201ENST00000387416 ABCC6O95255 1503 aa11.81□□□□□ -0.52
MT-TS1-201ENST00000387416 LARP1Q6PKG0 1096 aaKnown RBP11.8□□□□□ -0.52
MT-TS1-201ENST00000387416 CDCA7Q9BWT1 371 aaPredicted RBP11.8□□□□□ -0.52
MT-TS1-201ENST00000387416 CRB1P82279 1406 aa11.79□□□□□ -0.52
MT-TS1-201ENST00000387416 COL5A2P05997 1499 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms