RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 BOLA1Q9Y3E2 137 aa-0.22□□□□□ -2.44
RNU6-1340P-201ENST00000384438 ADAMTS4O75173 837 aa-0.23□□□□□ -2.45
RNU6-1340P-201ENST00000384438 INSRRP14616 1297 aa-0.23□□□□□ -2.45
RNU6-1340P-201ENST00000384438 SYN1P17600 705 aa-0.23□□□□□ -2.45
RNU6-1340P-201ENST00000384438 MKRN4PQ13434 485 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-1340P-201ENST00000384438 AMIGO3Q86WK7 504 aa-0.23□□□□□ -2.45
RNU6-1340P-201ENST00000384438 SCUBE1Q8IWY4 988 aa-0.23□□□□□ -2.45
RNU6-1340P-201ENST00000384438 NANOS1Q8WY41 292 aaKnown RBP-0.23□□□□□ -2.45
RNU6-1340P-201ENST00000384438 WASF1Q92558 559 aa-0.23□□□□□ -2.45
RNU6-1340P-201ENST00000384438 EGFRP00533 1210 aa-0.24□□□□□ -2.45
RNU6-1340P-201ENST00000384438 SRSF11Q05519 484 aaKnown RBP-0.24□□□□□ -2.45
RNU6-1340P-201ENST00000384438 XKR5Q6UX68 686 aa-0.24□□□□□ -2.45
RNU6-1340P-201ENST00000384438 IFNL1Q8IU54 200 aa-0.24□□□□□ -2.45
RNU6-1340P-201ENST00000384438 SUV39H2Q9H5I1 410 aa-0.24□□□□□ -2.45
RNU6-1340P-201ENST00000384438 TENM1Q9UKZ4 2725 aa-0.25□□□□□ -2.45
RNU6-1340P-201ENST00000384438 FSHBP01225 129 aa-0.25□□□□□ -2.45
RNU6-1340P-201ENST00000384438 ITGB5P18084 799 aa-0.25□□□□□ -2.45
RNU6-1340P-201ENST00000384438 TNFRSF1AP19438 455 aa-0.25□□□□□ -2.45
RNU6-1340P-201ENST00000384438 SCARF1Q14162 830 aa-0.25□□□□□ -2.45
RNU6-1340P-201ENST00000384438 GRIN2CQ14957 1233 aa-0.25□□□□□ -2.45
RNU6-1340P-201ENST00000384438 PKN1Q16512 942 aa-0.25□□□□□ -2.45
RNU6-1340P-201ENST00000384438 ANKLE1Q8NAG6 615 aa-0.25□□□□□ -2.45
RNU6-1340P-201ENST00000384438 NEDD1Q8NHV4 660 aa-0.25□□□□□ -2.45
RNU6-1340P-201ENST00000384438 ZSCAN18Q8TBC5 510 aaPredicted RBP-0.25□□□□□ -2.45
RNU6-1340P-201ENST00000384438 HPS1Q92902 700 aa-0.25□□□□□ -2.45
RNU6-1340P-201ENST00000384438 VOPP1Q96AW1 172 aa-0.25□□□□□ -2.45
RNU6-1340P-201ENST00000384438 TOX2Q96NM4 488 aa-0.25□□□□□ -2.45
RNU6-1340P-201ENST00000384438 PPP1R10Q96QC0 940 aaKnown RBP-0.25□□□□□ -2.45
RNU6-1340P-201ENST00000384438 KCNK17Q96T54 332 aa-0.25□□□□□ -2.45
RNU6-1340P-201ENST00000384438 SCAND2PQ9GZW5 306 aaPredicted RBP-0.25□□□□□ -2.45
RNU6-1340P-201ENST00000384438 NBPF3Q9H094 633 aa-0.25□□□□□ -2.45
RNU6-1340P-201ENST00000384438 EMILIN3Q9NT22 766 aa-0.25□□□□□ -2.45
RNU6-1340P-201ENST00000384438 PCDHB13Q9Y5F0 798 aa-0.25□□□□□ -2.45
RNU6-1340P-201ENST00000384438 NOTCH1P46531 2555 aa-0.25□□□□□ -2.45
RNU6-1340P-201ENST00000384438 SOBPA7XYQ1 873 aa-0.26□□□□□ -2.45
RNU6-1340P-201ENST00000384438 BMP1P13497 986 aa-0.26□□□□□ -2.45
RNU6-1340P-201ENST00000384438 IL12RB1P42701 662 aa-0.26□□□□□ -2.45
RNU6-1340P-201ENST00000384438 SSBP2P81877 361 aaPredicted RBP-0.26□□□□□ -2.45
RNU6-1340P-201ENST00000384438 PPP4R3CPQ6ZMV5 832 aa-0.26□□□□□ -2.45
RNU6-1340P-201ENST00000384438 ZFP42Q96MM3 310 aa-0.26□□□□□ -2.45
RNU6-1340P-201ENST00000384438 ZBED2Q9BTP6 218 aa-0.26□□□□□ -2.45
RNU6-1340P-201ENST00000384438 TSR3Q9UJK0 312 aaKnown RBP-0.26□□□□□ -2.45
RNU6-1340P-201ENST00000384438 MKL2Q9ULH7 1088 aa-0.26□□□□□ -2.45
RNU6-1340P-201ENST00000384438 DSTQ03001 7570 aaKnown RBP-0.27□□□□□ -2.45
RNU6-1340P-201ENST00000384438 KIAA1324LA8MWY0 1029 aaPredicted RBP-0.27□□□□□ -2.45
RNU6-1340P-201ENST00000384438 FARP2O94887 1054 aaPredicted RBP-0.27□□□□□ -2.45
RNU6-1340P-201ENST00000384438 MED26O95402 600 aa-0.27□□□□□ -2.45
RNU6-1340P-201ENST00000384438 BCRP11274 1271 aa-0.27□□□□□ -2.45
RNU6-1340P-201ENST00000384438 CTGFP29279 349 aa-0.27□□□□□ -2.45
RNU6-1340P-201ENST00000384438 KRTAP27-1Q3LI81 207 aa-0.27□□□□□ -2.45
RNU6-1340P-201ENST00000384438 LINC00114Q6XXX2 140 aa-0.27□□□□□ -2.45
RNU6-1340P-201ENST00000384438 ILDR2Q71H61 639 aa-0.27□□□□□ -2.45
RNU6-1340P-201ENST00000384438 LRRC56Q8IYG6 542 aaPredicted RBP-0.27□□□□□ -2.45
RNU6-1340P-201ENST00000384438 LRRC4BQ9NT99 713 aa-0.27□□□□□ -2.45
RNU6-1340P-201ENST00000384438 A0A0G2JLL6 359 aaPredicted RBP-0.28□□□□□ -2.45
RNU6-1340P-201ENST00000384438 TTC24A2A3L6 582 aaPredicted RBP-0.28□□□□□ -2.45
RNU6-1340P-201ENST00000384438 SSTR4P31391 388 aa-0.28□□□□□ -2.45
RNU6-1340P-201ENST00000384438 BHLHE22Q8NFJ8 381 aaPredicted RBP-0.28□□□□□ -2.45
RNU6-1340P-201ENST00000384438 HOXB4P17483 251 aaPredicted RBP-0.29□□□□□ -2.46
RNU6-1340P-201ENST00000384438 NBPF20Q3BBV1 942 aa-0.29□□□□□ -2.46
RNU6-1340P-201ENST00000384438 NBPF10Q6P3W6 841 aaKnown RBP-0.29□□□□□ -2.46
RNU6-1340P-201ENST00000384438 CBLL1Q75N03 491 aa-0.29□□□□□ -2.46
RNU6-1340P-201ENST00000384438 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP-0.29□□□□□ -2.46
RNU6-1340P-201ENST00000384438 J3QL48 77 aa-0.3□□□□□ -2.46
RNU6-1340P-201ENST00000384438 JUNBP17275 347 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-1340P-201ENST00000384438 GRM7Q14831 915 aa-0.3□□□□□ -2.46
RNU6-1340P-201ENST00000384438 KRT71Q3SY84 523 aa-0.3□□□□□ -2.46
RNU6-1340P-201ENST00000384438 PLA2G2CQ5R387 149 aa-0.3□□□□□ -2.46
RNU6-1340P-201ENST00000384438 CXorf38Q8TB03 319 aa-0.3□□□□□ -2.46
RNU6-1340P-201ENST00000384438 MEGF10Q96KG7 1140 aa-0.3□□□□□ -2.46
RNU6-1340P-201ENST00000384438 PPEF1O14829 653 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-1340P-201ENST00000384438 GRIN3BO60391 1043 aa-0.31□□□□□ -2.46
RNU6-1340P-201ENST00000384438 TIGD5Q53EQ6 642 aa-0.31□□□□□ -2.46
RNU6-1340P-201ENST00000384438 MSL1Q68DK7 614 aa-0.31□□□□□ -2.46
RNU6-1340P-201ENST00000384438 KRT77Q7Z794 578 aa-0.31□□□□□ -2.46
RNU6-1340P-201ENST00000384438 KSR1Q8IVT5 923 aa-0.31□□□□□ -2.46
RNU6-1340P-201ENST00000384438 SNIP1Q8TAD8 396 aaKnown RBP-0.31□□□□□ -2.46
RNU6-1340P-201ENST00000384438 ZFRQ96KR1 1074 aaKnown RBP-0.31□□□□□ -2.46
RNU6-1340P-201ENST00000384438 KCNH8Q96L42 1107 aa-0.31□□□□□ -2.46
RNU6-1340P-201ENST00000384438 C11orf21Q9P2W6 132 aa-0.31□□□□□ -2.46
RNU6-1340P-201ENST00000384438 HPS5Q9UPZ3 1129 aa-0.31□□□□□ -2.46
RNU6-1340P-201ENST00000384438 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-1340P-201ENST00000384438 CYR61O00622 381 aa-0.32□□□□□ -2.46
RNU6-1340P-201ENST00000384438 GRNP28799 593 aaKnown RBP-0.32□□□□□ -2.46
RNU6-1340P-201ENST00000384438 ACVRL1P37023 503 aa-0.32□□□□□ -2.46
RNU6-1340P-201ENST00000384438 MESP2Q0VG99 397 aa-0.32□□□□□ -2.46
RNU6-1340P-201ENST00000384438 EFEMP1Q12805 493 aa-0.32□□□□□ -2.46
RNU6-1340P-201ENST00000384438 SMN1Q16637 294 aaKnown RBP-0.32□□□□□ -2.46
RNU6-1340P-201ENST00000384438 SH3RF1Q7Z6J0 888 aa-0.32□□□□□ -2.46
RNU6-1340P-201ENST00000384438 LAPTM4BQ86VI4 370 aa-0.32□□□□□ -2.46
RNU6-1340P-201ENST00000384438 Q96M66 194 aa-0.32□□□□□ -2.46
RNU6-1340P-201ENST00000384438 BCL2L12Q9HB09 334 aa-0.32□□□□□ -2.46
RNU6-1340P-201ENST00000384438 ZBTB32Q9Y2Y4 487 aaPredicted RBP-0.32□□□□□ -2.46
RNU6-1340P-201ENST00000384438 PCDHGA4Q9Y5G9 962 aa-0.32□□□□□ -2.46
RNU6-1340P-201ENST00000384438 PHGR1C9JFL3 82 aa-0.33□□□□□ -2.46
RNU6-1340P-201ENST00000384438 MATN3O15232 486 aa-0.33□□□□□ -2.46
RNU6-1340P-201ENST00000384438 THBS1P07996 1170 aa-0.33□□□□□ -2.46
RNU6-1340P-201ENST00000384438 CFHP08603 1231 aa-0.33□□□□□ -2.46
RNU6-1340P-201ENST00000384438 FUT4P22083 530 aa-0.33□□□□□ -2.46
RNU6-1340P-201ENST00000384438 COL9A2Q14055 689 aaPredicted RBP-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms