RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 MST1RQ04912 1400 aa11.89□□□□□ -0.51
RNU1-28P-201ENST00000383861 SSH2Q76I76 1423 aa11.89□□□□□ -0.51
RNU1-28P-201ENST00000383861 PSME1Q06323 249 aa11.89□□□□□ -0.51
RNU1-28P-201ENST00000383861 CFAP53Q96M91 514 aa11.89□□□□□ -0.51
RNU1-28P-201ENST00000383861 KIF1AQ12756 1690 aa11.88□□□□□ -0.51
RNU1-28P-201ENST00000383861 ANKRD26Q9UPS8 1709 aa11.87□□□□□ -0.51
RNU1-28P-201ENST00000383861 CCDC184Q52MB2 194 aa11.87□□□□□ -0.51
RNU1-28P-201ENST00000383861 NME9Q86XW9 330 aa11.87□□□□□ -0.51
RNU1-28P-201ENST00000383861 PNISRQ8TF01 805 aaKnown RBP11.87□□□□□ -0.51
RNU1-28P-201ENST00000383861 KIF20BQ96Q89 1820 aa11.87□□□□□ -0.51
RNU1-28P-201ENST00000383861 INSRP06213 1382 aa11.87□□□□□ -0.51
RNU1-28P-201ENST00000383861 USP31Q70CQ4 1352 aa11.87□□□□□ -0.51
RNU1-28P-201ENST00000383861 ORAI2Q96SN7 254 aa11.86□□□□□ -0.51
RNU1-28P-201ENST00000383861 AATKQ6ZMQ8 1374 aa11.86□□□□□ -0.51
RNU1-28P-201ENST00000383861 NRKQ7Z2Y5 1582 aa11.86□□□□□ -0.51
RNU1-28P-201ENST00000383861 RGPD8O14715 1765 aaPredicted RBP11.86□□□□□ -0.51
RNU1-28P-201ENST00000383861 NPHP3Q7Z494 1330 aa11.86□□□□□ -0.51
RNU1-28P-201ENST00000383861 TNNT2P45379 298 aaPredicted RBP11.85□□□□□ -0.51
RNU1-28P-201ENST00000383861 FAM9BQ8IZU0 186 aa11.85□□□□□ -0.51
RNU1-28P-201ENST00000383861 SLAIN2Q9P270 581 aa11.85□□□□□ -0.51
RNU1-28P-201ENST00000383861 FOXO3O43524 673 aa11.84□□□□□ -0.51
RNU1-28P-201ENST00000383861 PAK3O75914 559 aaPredicted RBP11.84□□□□□ -0.51
RNU1-28P-201ENST00000383861 CENPBP07199 599 aaPredicted RBP11.84□□□□□ -0.51
RNU1-28P-201ENST00000383861 MTHFSP49914 203 aa11.84□□□□□ -0.51
RNU1-28P-201ENST00000383861 WDR43Q15061 677 aaKnown RBP eCLIP11.84□□□□□ -0.51
RNU1-28P-201ENST00000383861 KRT28Q7Z3Y7 464 aa11.84□□□□□ -0.51
RNU1-28P-201ENST00000383861 ABTB2Q8N961 1025 aa11.84□□□□□ -0.51
RNU1-28P-201ENST00000383861 OVOS2A0A0J9YW53 1432 aa11.84□□□□□ -0.51
RNU1-28P-201ENST00000383861 OVOS2Q6IE36 1432 aa11.84□□□□□ -0.51
RNU1-28P-201ENST00000383861 XIRP1Q702N8 1843 aaKnown RBP11.83□□□□□ -0.51
RNU1-28P-201ENST00000383861 NLRP6P59044 892 aa11.83□□□□□ -0.52
RNU1-28P-201ENST00000383861 YTHDC1Q96MU7 727 aaKnown RBP11.83□□□□□ -0.52
RNU1-28P-201ENST00000383861 NUDCQ9Y266 331 aa11.83□□□□□ -0.52
RNU1-28P-201ENST00000383861 LTBP4Q8N2S1 1624 aa11.82□□□□□ -0.52
RNU1-28P-201ENST00000383861 SBNO1A3KN83 1393 aa11.82□□□□□ -0.52
RNU1-28P-201ENST00000383861 BRINP3Q76B58 766 aa11.81□□□□□ -0.52
RNU1-28P-201ENST00000383861 KCNH5Q8NCM2 988 aa11.81□□□□□ -0.52
RNU1-28P-201ENST00000383861 POLKQ9UBT6 870 aa11.81□□□□□ -0.52
RNU1-28P-201ENST00000383861 ZRANB1Q9UGI0 708 aa11.8□□□□□ -0.52
RNU1-28P-201ENST00000383861 KIF24Q5T7B8 1368 aa11.79□□□□□ -0.52
RNU1-28P-201ENST00000383861 PNPLA6Q8IY17 1366 aa11.79□□□□□ -0.52
RNU1-28P-201ENST00000383861 SMG6Q86US8 1419 aaKnown RBP11.79□□□□□ -0.52
RNU1-28P-201ENST00000383861 USP54Q70EL1 1684 aa11.79□□□□□ -0.52
RNU1-28P-201ENST00000383861 PNNQ9H307 717 aaKnown RBP11.79□□□□□ -0.52
RNU1-28P-201ENST00000383861 IQSEC2Q5JU85 1478 aa11.78□□□□□ -0.52
RNU1-28P-201ENST00000383861 DIAPH1O60610 1272 aaKnown RBP11.78□□□□□ -0.52
RNU1-28P-201ENST00000383861 TOM1O60784 492 aa11.78□□□□□ -0.52
RNU1-28P-201ENST00000383861 HNRNPUQ00839 825 aaKnown RBP eCLIP11.78□□□□□ -0.52
RNU1-28P-201ENST00000383861 NGEFQ8N5V2 710 aa11.78□□□□□ -0.52
RNU1-28P-201ENST00000383861 ARHGEF10O15013 1369 aa11.78□□□□□ -0.52
RNU1-28P-201ENST00000383861 PIK3C2AO00443 1686 aa11.78□□□□□ -0.52
RNU1-28P-201ENST00000383861 CDK12Q9NYV4 1490 aaPredicted RBP11.77□□□□□ -0.52
RNU1-28P-201ENST00000383861 ADAMTS8Q9UP79 889 aa11.77□□□□□ -0.53
RNU1-28P-201ENST00000383861 PPM1GO15355 546 aaPredicted RBP11.76□□□□□ -0.53
RNU1-28P-201ENST00000383861 LMOD2Q6P5Q4 547 aa11.76□□□□□ -0.53
RNU1-28P-201ENST00000383861 SOS2Q07890 1332 aaPredicted RBP11.76□□□□□ -0.53
RNU1-28P-201ENST00000383861 SPATA31A3Q5VYP0 1347 aa11.76□□□□□ -0.53
RNU1-28P-201ENST00000383861 BLMP54132 1417 aaPredicted RBP11.76□□□□□ -0.53
RNU1-28P-201ENST00000383861 TNS3Q68CZ2 1445 aa11.76□□□□□ -0.53
RNU1-28P-201ENST00000383861 TRPM3Q9HCF6 1732 aaPredicted RBP11.75□□□□□ -0.53
RNU1-28P-201ENST00000383861 AMPHP49418 695 aa11.75□□□□□ -0.53
RNU1-28P-201ENST00000383861 XPCQ01831 940 aaPredicted RBP11.75□□□□□ -0.53
RNU1-28P-201ENST00000383861 EMILIN1Q9Y6C2 1016 aa11.75□□□□□ -0.53
RNU1-28P-201ENST00000383861 USP19O94966 1318 aa11.75□□□□□ -0.53
RNU1-28P-201ENST00000383861 RTL1A6NKG5 1358 aa11.75□□□□□ -0.53
RNU1-28P-201ENST00000383861 FLT4P35916 1363 aa11.75□□□□□ -0.53
RNU1-28P-201ENST00000383861 PXDNQ92626 1479 aa11.75□□□□□ -0.53
RNU1-28P-201ENST00000383861 U2AF1L5P0DN76 240 aaPredicted RBP11.74□□□□□ -0.53
RNU1-28P-201ENST00000383861 U2AF1Q01081 240 aaKnown RBP eCLIP11.74□□□□□ -0.53
RNU1-28P-201ENST00000383861 RRS1Q15050 365 aaKnown RBP11.74□□□□□ -0.53
RNU1-28P-201ENST00000383861 NUTM2GQ5VZR2 741 aa11.74□□□□□ -0.53
RNU1-28P-201ENST00000383861 MAP3K19Q56UN5 1328 aa11.74□□□□□ -0.53
RNU1-28P-201ENST00000383861 ZBED9Q6R2W3 1325 aa11.74□□□□□ -0.53
RNU1-28P-201ENST00000383861 U2SURPO15042 1029 aaKnown RBP11.73□□□□□ -0.53
RNU1-28P-201ENST00000383861 SLIT3O75094 1523 aa11.73□□□□□ -0.53
RNU1-28P-201ENST00000383861 COL3A1P02461 1466 aaPredicted RBP11.73□□□□□ -0.53
RNU1-28P-201ENST00000383861 GCP02774 474 aa11.73□□□□□ -0.53
RNU1-28P-201ENST00000383861 NEFMP07197 916 aa11.73□□□□□ -0.53
RNU1-28P-201ENST00000383861 NCBP3Q53F19 620 aaKnown RBP11.73□□□□□ -0.53
RNU1-28P-201ENST00000383861 RUNDC1Q96C34 613 aa11.73□□□□□ -0.53
RNU1-28P-201ENST00000383861 ALS2Q96Q42 1657 aa11.72□□□□□ -0.53
RNU1-28P-201ENST00000383861 SOX12O15370 315 aa11.72□□□□□ -0.53
RNU1-28P-201ENST00000383861 FCHSD2O94868 740 aa11.72□□□□□ -0.53
RNU1-28P-201ENST00000383861 FBLN1P23142 703 aa11.72□□□□□ -0.53
RNU1-28P-201ENST00000383861 IL13P35225 146 aa11.72□□□□□ -0.53
RNU1-28P-201ENST00000383861 LRRC59Q96AG4 307 aaKnown RBP11.72□□□□□ -0.53
RNU1-28P-201ENST00000383861 MAP2P11137 1827 aaKnown RBP11.72□□□□□ -0.53
RNU1-28P-201ENST00000383861 IP6K1Q92551 441 aa11.71□□□□□ -0.53
RNU1-28P-201ENST00000383861 DDX17Q92841 729 aaKnown RBP11.71□□□□□ -0.53
RNU1-28P-201ENST00000383861 HOXC9P31274 260 aa11.7□□□□□ -0.54
RNU1-28P-201ENST00000383861 PDE3BQ13370 1112 aa11.7□□□□□ -0.54
RNU1-28P-201ENST00000383861 ARHGEF25Q86VW2 580 aa11.7□□□□□ -0.54
RNU1-28P-201ENST00000383861 SHPRHQ149N8 1683 aa11.7□□□□□ -0.54
RNU1-28P-201ENST00000383861 NHSL1Q5SYE7 1610 aa11.7□□□□□ -0.54
RNU1-28P-201ENST00000383861 MED1Q15648 1581 aaPredicted RBP11.7□□□□□ -0.54
RNU1-28P-201ENST00000383861 NFAT5O94916 1531 aa11.7□□□□□ -0.54
RNU1-28P-201ENST00000383861 MARF1Q9Y4F3 1742 aaKnown RBP11.69□□□□□ -0.54
RNU1-28P-201ENST00000383861 AHDC1Q5TGY3 1603 aaPredicted RBP11.69□□□□□ -0.54
RNU1-28P-201ENST00000383861 EIF4A2Q14240 407 aaKnown RBP11.69□□□□□ -0.54
RNU1-28P-201ENST00000383861 CERKQ8TCT0 537 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms