RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 ITSN1Q15811 1721 aa38.26■■■■□ 3.72
NPHP3-202ENST00000383282 A0A0G2JS52 829 aa38.26■■■■□ 3.72
NPHP3-202ENST00000383282 MYT1Q01538 1121 aa38.26■■■■□ 3.72
NPHP3-202ENST00000383282 SF3B2Q13435 895 aaKnown RBP38.25■■■■□ 3.71
NPHP3-202ENST00000383282 KRT27Q7Z3Y8 459 aa38.25■■■■□ 3.71
NPHP3-202ENST00000383282 KIAA1210Q9ULL0 1709 aa38.24■■■■□ 3.71
NPHP3-202ENST00000383282 COL14A1Q05707 1796 aaKnown RBP38.23■■■■□ 3.71
NPHP3-202ENST00000383282 PRDM11Q9NQV5 511 aa38.21■■■■□ 3.71
NPHP3-202ENST00000383282 CCDC61Q9Y6R9 512 aa38.21■■■■□ 3.71
NPHP3-202ENST00000383282 BRWD3Q6RI45 1802 aa38.21■■■■□ 3.71
NPHP3-202ENST00000383282 NRAPQ86VF7 1730 aa38.19■■■■□ 3.7
NPHP3-202ENST00000383282 NBPF1Q3BBV0 1214 aa38.19■■■■□ 3.7
NPHP3-202ENST00000383282 FAM98CQ17RN3 349 aaKnown RBP38.18■■■■□ 3.7
NPHP3-202ENST00000383282 POLR3AO14802 1390 aaPredicted RBP38.16■■■■□ 3.7
NPHP3-202ENST00000383282 ACEP12821 1306 aa38.15■■■■□ 3.7
NPHP3-202ENST00000383282 CRYBG1Q9Y4K1 1723 aa38.13■■■■□ 3.69
NPHP3-202ENST00000383282 PLEKHG3A1L390 1219 aa38.13■■■■□ 3.69
NPHP3-202ENST00000383282 NBPF8Q3BBV2 869 aa38.13■■■■□ 3.69
NPHP3-202ENST00000383282 SPATA31A5Q5VU36 1347 aa38.12■■■■□ 3.69
NPHP3-202ENST00000383282 SPATA31A7Q8IWB4 1347 aa38.12■■■■□ 3.69
NPHP3-202ENST00000383282 CENPJQ9HC77 1338 aaPredicted RBP38.12■■■■□ 3.69
NPHP3-202ENST00000383282 DEFB132Q7Z7B7 95 aa38.11■■■■□ 3.69
NPHP3-202ENST00000383282 KIAA0232Q92628 1395 aa38.1■■■■□ 3.69
NPHP3-202ENST00000383282 SRPK2P78362 688 aaKnown RBP38.1■■■■□ 3.69
NPHP3-202ENST00000383282 TOPAZ1Q8N9V7 1692 aa38.1■■■■□ 3.69
NPHP3-202ENST00000383282 NUTM2GQ5VZR2 741 aa38.09■■■■□ 3.69
NPHP3-202ENST00000383282 SRCAPQ6ZRS2 3230 aa38.06■■■■□ 3.68
NPHP3-202ENST00000383282 ZC3H6P61129 1189 aaKnown RBP38.05■■■■□ 3.68
NPHP3-202ENST00000383282 CHRNA2Q15822 529 aa38.05■■■■□ 3.68
NPHP3-202ENST00000383282 ABTB2Q8N961 1025 aa38.04■■■■□ 3.68
NPHP3-202ENST00000383282 PHRF1Q9P1Y6 1649 aaKnown RBP38.03■■■■□ 3.68
NPHP3-202ENST00000383282 PPIP5K1Q6PFW1 1433 aa38.02■■■■□ 3.68
NPHP3-202ENST00000383282 BAG6P46379 1132 aa38.01■■■■□ 3.68
NPHP3-202ENST00000383282 L3MBTL2Q969R5 705 aa38.01■■■■□ 3.68
NPHP3-202ENST00000383282 STRN4Q9NRL3 753 aa38.01■■■■□ 3.68
NPHP3-202ENST00000383282 CABP2Q9NPB3 220 aa38■■■■□ 3.67
NPHP3-202ENST00000383282 SPATA31A1Q5TZJ5 1347 aa37.99■■■■□ 3.67
NPHP3-202ENST00000383282 NLRP13Q86W25 1043 aa37.96■■■■□ 3.67
NPHP3-202ENST00000383282 EVA1CP58658 441 aa37.95■■■■□ 3.67
NPHP3-202ENST00000383282 THSD7AQ9UPZ6 1657 aa37.94■■■■□ 3.66
NPHP3-202ENST00000383282 BRD4O60885 1362 aaPredicted RBP37.93■■■■□ 3.66
NPHP3-202ENST00000383282 USP19O94966 1318 aa37.93■■■■□ 3.66
NPHP3-202ENST00000383282 QRICH2Q9H0J4 1663 aa37.92■■■■□ 3.66
NPHP3-202ENST00000383282 SIN3AQ96ST3 1273 aa37.92■■■■□ 3.66
NPHP3-202ENST00000383282 FAM182BQ5T319 152 aa37.91■■■■□ 3.66
NPHP3-202ENST00000383282 NRKQ7Z2Y5 1582 aa37.91■■■■□ 3.66
NPHP3-202ENST00000383282 CPDO75976 1380 aa37.91■■■■□ 3.66
NPHP3-202ENST00000383282 NEUROD1Q13562 356 aa37.89■■■■□ 3.66
NPHP3-202ENST00000383282 CABP1Q9NZU7 370 aa37.89■■■■□ 3.66
NPHP3-202ENST00000383282 USP35Q9P2H5 1018 aa37.89■■■■□ 3.66
NPHP3-202ENST00000383282 SSH2Q76I76 1423 aa37.88■■■■□ 3.66
NPHP3-202ENST00000383282 EVC2Q86UK5 1308 aa37.87■■■■□ 3.65
NPHP3-202ENST00000383282 GCP02774 474 aa37.87■■■■□ 3.65
NPHP3-202ENST00000383282 ROCK2O75116 1388 aaKnown RBP37.86■■■■□ 3.65
NPHP3-202ENST00000383282 BARGINQ6ZT62 677 aa37.84■■■■□ 3.65
NPHP3-202ENST00000383282 USP6P35125 1406 aa37.84■■■■□ 3.65
NPHP3-202ENST00000383282 RGPD1P0DJD0 1748 aa37.84■■■■□ 3.65
NPHP3-202ENST00000383282 FAM196AQ6ZSG2 479 aa37.83■■■■□ 3.65
NPHP3-202ENST00000383282 EN1Q05925 392 aaPredicted RBP37.82■■■■□ 3.64
NPHP3-202ENST00000383282 TRPM1Q7Z4N2 1603 aa37.82■■■■□ 3.64
NPHP3-202ENST00000383282 CAMTA1Q9Y6Y1 1673 aa37.82■■■■□ 3.64
NPHP3-202ENST00000383282 LARP1Q6PKG0 1096 aaKnown RBP37.81■■■■□ 3.64
NPHP3-202ENST00000383282 NLRP6P59044 892 aa37.8■■■■□ 3.64
NPHP3-202ENST00000383282 TCP11L2Q8N4U5 519 aa37.8■■■■□ 3.64
NPHP3-202ENST00000383282 PDE3BQ13370 1112 aa37.79■■■■□ 3.64
NPHP3-202ENST00000383282 DISP2A7MBM2 1401 aa37.78■■■■□ 3.64
NPHP3-202ENST00000383282 LMO7Q8WWI1 1683 aa37.77■■■■□ 3.64
NPHP3-202ENST00000383282 THRAP3Q9Y2W1 955 aaKnown RBP37.77■■■■□ 3.64
NPHP3-202ENST00000383282 ZBTB7CA1YPR0 619 aa37.75■■■■□ 3.63
NPHP3-202ENST00000383282 TRIM37O94972 964 aa37.74■■■■□ 3.63
NPHP3-202ENST00000383282 PSDA5PKW4 1024 aaPredicted RBP37.73■■■■□ 3.63
NPHP3-202ENST00000383282 ZNF692Q9BU19 519 aaPredicted RBP37.72■■■■□ 3.63
NPHP3-202ENST00000383282 COL5A2P05997 1499 aaPredicted RBP37.71■■■■□ 3.63
NPHP3-202ENST00000383282 SLIT3O75094 1523 aa37.69■■■■□ 3.62
NPHP3-202ENST00000383282 TNS1Q9HBL0 1735 aaKnown RBP37.69■■■■□ 3.62
NPHP3-202ENST00000383282 AATKQ6ZMQ8 1374 aa37.68■■■■□ 3.62
NPHP3-202ENST00000383282 EZH2Q15910 746 aaKnown RBP37.67■■■■□ 3.62
NPHP3-202ENST00000383282 CRB1P82279 1406 aa37.67■■■■□ 3.62
NPHP3-202ENST00000383282 APBA3O96018 575 aa37.66■■■■□ 3.62
NPHP3-202ENST00000383282 TTC21BQ7Z4L5 1316 aa37.64■■■■□ 3.62
NPHP3-202ENST00000383282 CAMKK2Q96RR4 588 aa37.63■■■■□ 3.61
NPHP3-202ENST00000383282 LRP5O75197 1615 aa37.62■■■■□ 3.61
NPHP3-202ENST00000383282 KCNH5Q8NCM2 988 aa37.62■■■■□ 3.61
NPHP3-202ENST00000383282 PARD3Q8TEW0 1356 aa37.62■■■■□ 3.61
NPHP3-202ENST00000383282 PIK3C2AO00443 1686 aa37.62■■■■□ 3.61
NPHP3-202ENST00000383282 TTC21AQ8NDW8 1320 aa37.61■■■■□ 3.61
NPHP3-202ENST00000383282 R3HDM1Q15032 1099 aaKnown RBP37.61■■■■□ 3.61
NPHP3-202ENST00000383282 C11orf95C9JLR9 678 aaPredicted RBP37.6■■■■□ 3.61
NPHP3-202ENST00000383282 TOM1L2Q6ZVM7 507 aa37.59■■■■□ 3.61
NPHP3-202ENST00000383282 CARD11Q9BXL7 1154 aa37.59■■■■□ 3.61
NPHP3-202ENST00000383282 KTN1Q86UP2 1357 aaKnown RBP37.56■■■■□ 3.6
NPHP3-202ENST00000383282 SBNO2Q9Y2G9 1366 aa37.56■■■■□ 3.6
NPHP3-202ENST00000383282 CPSF1Q10570 1443 aaKnown RBP37.56■■■■□ 3.6
NPHP3-202ENST00000383282 PARP4Q9UKK3 1724 aaKnown RBP37.56■■■■□ 3.6
NPHP3-202ENST00000383282 ARHGEF25Q86VW2 580 aa37.54■■■■□ 3.6
NPHP3-202ENST00000383282 TONSLQ96HA7 1378 aa37.54■■■■□ 3.6
NPHP3-202ENST00000383282 AKAP12Q02952 1782 aa37.53■■■■□ 3.6
NPHP3-202ENST00000383282 SOX12O15370 315 aa37.53■■■■□ 3.6
NPHP3-202ENST00000383282 WDR17Q8IZU2 1322 aa37.53■■■■□ 3.6
NPHP3-202ENST00000383282 AXIN2Q9Y2T1 843 aa37.52■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms