RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 TNS3Q68CZ2 1445 aa22.66■■□□□ 1.22
SNRPB-201ENST00000381342 POLR3AO14802 1390 aaPredicted RBP22.66■■□□□ 1.22
SNRPB-201ENST00000381342 RBM6P78332 1123 aaKnown RBP22.66■■□□□ 1.22
SNRPB-201ENST00000381342 ARHGEF10O15013 1369 aa22.65■■□□□ 1.22
SNRPB-201ENST00000381342 PLEKHG5O94827 1062 aa22.65■■□□□ 1.22
SNRPB-201ENST00000381342 TMF1P82094 1093 aa22.65■■□□□ 1.22
SNRPB-201ENST00000381342 TRPC5Q9UL62 973 aaPredicted RBP22.65■■□□□ 1.22
SNRPB-201ENST00000381342 MON2Q7Z3U7 1717 aa22.65■■□□□ 1.22
SNRPB-201ENST00000381342 ACEP12821 1306 aa22.64■■□□□ 1.22
SNRPB-201ENST00000381342 PLEKHG3A1L390 1219 aa22.64■■□□□ 1.21
SNRPB-201ENST00000381342 FNBP4Q8N3X1 1017 aaPredicted RBP22.64■■□□□ 1.21
SNRPB-201ENST00000381342 NRKQ7Z2Y5 1582 aa22.63■■□□□ 1.21
SNRPB-201ENST00000381342 PAK3O75914 559 aaPredicted RBP22.63■■□□□ 1.21
SNRPB-201ENST00000381342 CABP1Q9NZU7 370 aa22.63■■□□□ 1.21
SNRPB-201ENST00000381342 ABCA3Q99758 1704 aa22.62■■□□□ 1.21
SNRPB-201ENST00000381342 SLC24A1O60721 1099 aa22.62■■□□□ 1.21
SNRPB-201ENST00000381342 CD163L1Q9NR16 1453 aa22.6■■□□□ 1.21
SNRPB-201ENST00000381342 USP6P35125 1406 aa22.59■■□□□ 1.21
SNRPB-201ENST00000381342 PUS7Q96PZ0 661 aaKnown RBP22.59■■□□□ 1.21
SNRPB-201ENST00000381342 CRYBG1Q9Y4K1 1723 aa22.58■■□□□ 1.21
SNRPB-201ENST00000381342 TMC1Q8TDI8 760 aa22.58■■□□□ 1.21
SNRPB-201ENST00000381342 CABLES1Q8TDN4 633 aa22.58■■□□□ 1.21
SNRPB-201ENST00000381342 CDK12Q9NYV4 1490 aaPredicted RBP22.57■■□□□ 1.2
SNRPB-201ENST00000381342 CPSF1Q10570 1443 aaKnown RBP22.57■■□□□ 1.2
SNRPB-201ENST00000381342 PIK3C2AO00443 1686 aa22.55■■□□□ 1.2
SNRPB-201ENST00000381342 NINLQ9Y2I6 1382 aa22.55■■□□□ 1.2
SNRPB-201ENST00000381342 CDCA8Q53HL2 280 aa22.55■■□□□ 1.2
SNRPB-201ENST00000381342 SLC12A5Q9H2X9 1139 aa22.55■■□□□ 1.2
SNRPB-201ENST00000381342 PHRF1Q9P1Y6 1649 aaKnown RBP22.54■■□□□ 1.2
SNRPB-201ENST00000381342 UNC5CLQ8IV45 518 aa22.54■■□□□ 1.2
SNRPB-201ENST00000381342 MARF1Q9Y4F3 1742 aaKnown RBP22.54■■□□□ 1.2
SNRPB-201ENST00000381342 A0A1W2PP64 1363 aa22.53■■□□□ 1.2
SNRPB-201ENST00000381342 KTN1Q86UP2 1357 aaKnown RBP22.53■■□□□ 1.2
SNRPB-201ENST00000381342 SSH2Q76I76 1423 aa22.52■■□□□ 1.2
SNRPB-201ENST00000381342 POLR3GLQ9BT43 218 aa22.52■■□□□ 1.2
SNRPB-201ENST00000381342 ZEB1P37275 1124 aaPredicted RBP22.51■■□□□ 1.19
SNRPB-201ENST00000381342 ATRNO75882 1429 aa22.5■■□□□ 1.19
SNRPB-201ENST00000381342 GJD4Q96KN9 370 aaPredicted RBP22.5■■□□□ 1.19
SNRPB-201ENST00000381342 BRD4O60885 1362 aaPredicted RBP22.5■■□□□ 1.19
SNRPB-201ENST00000381342 BCL9LQ86UU0 1499 aa22.49■■□□□ 1.19
SNRPB-201ENST00000381342 C11orf95C9JLR9 678 aaPredicted RBP22.49■■□□□ 1.19
SNRPB-201ENST00000381342 HDGFL2Q7Z4V5 671 aaPredicted RBP22.49■■□□□ 1.19
SNRPB-201ENST00000381342 CCDC9Q9Y3X0 531 aaKnown RBP22.49■■□□□ 1.19
SNRPB-201ENST00000381342 ANKRD36BQ8N2N9 1353 aa22.49■■□□□ 1.19
SNRPB-201ENST00000381342 TERF2IPQ9NYB0 399 aa22.48■■□□□ 1.19
SNRPB-201ENST00000381342 EDC4Q6P2E9 1401 aaKnown RBP22.48■■□□□ 1.19
SNRPB-201ENST00000381342 ZNF692Q9BU19 519 aaPredicted RBP22.47■■□□□ 1.19
SNRPB-201ENST00000381342 SLIT2O94813 1529 aa22.47■■□□□ 1.19
SNRPB-201ENST00000381342 USP54Q70EL1 1684 aa22.46■■□□□ 1.19
SNRPB-201ENST00000381342 KIF20BQ96Q89 1820 aa22.46■■□□□ 1.19
SNRPB-201ENST00000381342 NUTM2GQ5VZR2 741 aa22.46■■□□□ 1.19
SNRPB-201ENST00000381342 ABTB2Q8N961 1025 aa22.46■■□□□ 1.19
SNRPB-201ENST00000381342 TTC21BQ7Z4L5 1316 aa22.46■■□□□ 1.19
SNRPB-201ENST00000381342 RGS12O14924 1447 aa22.46■■□□□ 1.19
SNRPB-201ENST00000381342 FAM83GA6ND36 823 aa22.45■■□□□ 1.18
SNRPB-201ENST00000381342 UPF1Q92900 1129 aaKnown RBP eCLIP22.45■■□□□ 1.18
SNRPB-201ENST00000381342 KIF7Q2M1P5 1343 aa22.45■■□□□ 1.18
SNRPB-201ENST00000381342 PRDM11Q9NQV5 511 aa22.44■■□□□ 1.18
SNRPB-201ENST00000381342 VPS72Q15906 364 aa22.43■■□□□ 1.18
SNRPB-201ENST00000381342 TTC21AQ8NDW8 1320 aa22.42■■□□□ 1.18
SNRPB-201ENST00000381342 NLRP13Q86W25 1043 aa22.42■■□□□ 1.18
SNRPB-201ENST00000381342 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.42■■□□□ 1.18
SNRPB-201ENST00000381342 BTG4Q9NY30 223 aa22.42■■□□□ 1.18
SNRPB-201ENST00000381342 PLCH1Q4KWH8 1693 aa22.42■■□□□ 1.18
SNRPB-201ENST00000381342 SLIT3O75094 1523 aa22.41■■□□□ 1.18
SNRPB-201ENST00000381342 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.4■■□□□ 1.18
SNRPB-201ENST00000381342 CCDC7Q96M83 1385 aa22.4■■□□□ 1.18
SNRPB-201ENST00000381342 USP19O94966 1318 aa22.4■■□□□ 1.18
SNRPB-201ENST00000381342 NSD3Q9BZ95 1437 aa22.4■■□□□ 1.18
SNRPB-201ENST00000381342 NWD2Q9ULI1 1742 aa22.38■■□□□ 1.17
SNRPB-201ENST00000381342 ZC3H6P61129 1189 aaKnown RBP22.38■■□□□ 1.17
SNRPB-201ENST00000381342 NME9Q86XW9 330 aa22.38■■□□□ 1.17
SNRPB-201ENST00000381342 WASHC2AQ641Q2 1341 aa22.37■■□□□ 1.17
SNRPB-201ENST00000381342 A0A0G2JS52 829 aa22.37■■□□□ 1.17
SNRPB-201ENST00000381342 NLRP6P59044 892 aa22.37■■□□□ 1.17
SNRPB-201ENST00000381342 MYT1Q01538 1121 aa22.37■■□□□ 1.17
SNRPB-201ENST00000381342 COL14A1Q05707 1796 aaKnown RBP22.36■■□□□ 1.17
SNRPB-201ENST00000381342 ZRANB1Q9UGI0 708 aa22.36■■□□□ 1.17
SNRPB-201ENST00000381342 OVOS2A0A0J9YW53 1432 aa22.35■■□□□ 1.17
SNRPB-201ENST00000381342 OVOS2Q6IE36 1432 aa22.35■■□□□ 1.17
SNRPB-201ENST00000381342 CARD14Q9BXL6 1004 aa22.35■■□□□ 1.17
SNRPB-201ENST00000381342 EVA1CP58658 441 aa22.34■■□□□ 1.17
SNRPB-201ENST00000381342 NFAT5O94916 1531 aa22.34■■□□□ 1.17
SNRPB-201ENST00000381342 USP31Q70CQ4 1352 aa22.34■■□□□ 1.17
SNRPB-201ENST00000381342 KIAA0232Q92628 1395 aa22.34■■□□□ 1.17
SNRPB-201ENST00000381342 ANKRD26Q9UPS8 1709 aa22.34■■□□□ 1.17
SNRPB-201ENST00000381342 CHRNA2Q15822 529 aa22.33■■□□□ 1.17
SNRPB-201ENST00000381342 SEPT12Q8IYM1 358 aa22.33■■□□□ 1.17
SNRPB-201ENST00000381342 NRAPQ86VF7 1730 aa22.32■■□□□ 1.16
SNRPB-201ENST00000381342 GCP02774 474 aa22.32■■□□□ 1.16
SNRPB-201ENST00000381342 LTN1O94822 1766 aa22.32■■□□□ 1.16
SNRPB-201ENST00000381342 PANK3Q9H999 370 aa22.31■■□□□ 1.16
SNRPB-201ENST00000381342 STRN4Q9NRL3 753 aa22.31■■□□□ 1.16
SNRPB-201ENST00000381342 LMO7Q8WWI1 1683 aa22.3■■□□□ 1.16
SNRPB-201ENST00000381342 GLI3P10071 1580 aa22.29■■□□□ 1.16
SNRPB-201ENST00000381342 ZBTB7CA1YPR0 619 aa22.29■■□□□ 1.16
SNRPB-201ENST00000381342 SOX12O15370 315 aa22.29■■□□□ 1.16
SNRPB-201ENST00000381342 CCDC125Q86Z20 511 aa22.29■■□□□ 1.16
SNRPB-201ENST00000381342 ONECUT3O60422 494 aaPredicted RBP22.28■■□□□ 1.16
SNRPB-201ENST00000381342 FAM98CQ17RN3 349 aaKnown RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms