RNA–Protein interactions for RNA: ENST00000381337.6

THUMPD1-201, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 4,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-201ENST00000381337 TMPOP42166 694 aaKnown RBP13.77□□□□□ -0.21
THUMPD1-201ENST00000381337 MLECQ14165 292 aa13.77□□□□□ -0.21
THUMPD1-201ENST00000381337 GORABQ5T7V8 394 aa13.77□□□□□ -0.21
THUMPD1-201ENST00000381337 CREBRFQ8IUR6 639 aa13.77□□□□□ -0.21
THUMPD1-201ENST00000381337 BMP2KLQ5H9B9 411 aa13.76□□□□□ -0.21
THUMPD1-201ENST00000381337 SDF4Q9BRK5 362 aa13.76□□□□□ -0.21
THUMPD1-201ENST00000381337 PRDM2Q13029 1718 aa13.76□□□□□ -0.21
THUMPD1-201ENST00000381337 EPRSP07814 1512 aaKnown RBP13.76□□□□□ -0.21
THUMPD1-201ENST00000381337 TRIM27P14373 513 aa13.76□□□□□ -0.21
THUMPD1-201ENST00000381337 PARD3Q8TEW0 1356 aa13.76□□□□□ -0.21
THUMPD1-201ENST00000381337 GNAI3P08754 354 aa13.75□□□□□ -0.21
THUMPD1-201ENST00000381337 TAF3Q5VWG9 929 aa13.75□□□□□ -0.21
THUMPD1-201ENST00000381337 DNAJC5BQ9UF47 199 aa13.75□□□□□ -0.21
THUMPD1-201ENST00000381337 NUTM2FA1L443 756 aa13.75□□□□□ -0.21
THUMPD1-201ENST00000381337 HSP90AB4PQ58FF6 505 aa13.75□□□□□ -0.21
THUMPD1-201ENST00000381337 LTV1Q96GA3 475 aaPredicted RBP13.75□□□□□ -0.21
THUMPD1-201ENST00000381337 USP25Q9UHP3 1055 aa13.75□□□□□ -0.21
THUMPD1-201ENST00000381337 TSPYL4Q9UJ04 414 aa13.75□□□□□ -0.21
THUMPD1-201ENST00000381337 C9orf78Q9NZ63 289 aaPredicted RBP13.75□□□□□ -0.21
THUMPD1-201ENST00000381337 KDM2BQ8NHM5 1336 aa13.74□□□□□ -0.21
THUMPD1-201ENST00000381337 NAT10Q9H0A0 1025 aaKnown RBP13.74□□□□□ -0.21
THUMPD1-201ENST00000381337 SURF6O75683 361 aaKnown RBP13.74□□□□□ -0.21
THUMPD1-201ENST00000381337 EIF2S2P20042 333 aaKnown RBP13.74□□□□□ -0.21
THUMPD1-201ENST00000381337 ZSCAN23Q3MJ62 389 aa13.74□□□□□ -0.21
THUMPD1-201ENST00000381337 TBC1D9Q6ZT07 1266 aa13.74□□□□□ -0.21
THUMPD1-201ENST00000381337 RBM27Q9P2N5 1060 aaKnown RBP13.74□□□□□ -0.21
THUMPD1-201ENST00000381337 GPRASP1Q5JY77 1395 aa13.74□□□□□ -0.21
THUMPD1-201ENST00000381337 KRT85P78386 507 aa13.74□□□□□ -0.21
THUMPD1-201ENST00000381337 NOM1Q5C9Z4 860 aaKnown RBP13.74□□□□□ -0.21
THUMPD1-201ENST00000381337 RPAP2Q8IXW5 612 aaPredicted RBP13.74□□□□□ -0.21
THUMPD1-201ENST00000381337 CNTROBQ8N137 903 aa13.74□□□□□ -0.21
THUMPD1-201ENST00000381337 SNX21Q969T3 373 aa13.74□□□□□ -0.21
THUMPD1-201ENST00000381337 CWC15Q9P013 229 aaKnown RBP13.74□□□□□ -0.21
THUMPD1-201ENST00000381337 ZKSCAN5Q9Y2L8 839 aa13.74□□□□□ -0.21
THUMPD1-201ENST00000381337 TNMDQ9H2S6 317 aa13.73□□□□□ -0.21
THUMPD1-201ENST00000381337 CDK13Q14004 1512 aaKnown RBP13.73□□□□□ -0.21
THUMPD1-201ENST00000381337 UBTFL1P0CB47 393 aaPredicted RBP13.73□□□□□ -0.21
THUMPD1-201ENST00000381337 SETQ01105 290 aaPredicted RBP13.73□□□□□ -0.21
THUMPD1-201ENST00000381337 KINO60870 393 aaKnown RBP13.72□□□□□ -0.21
THUMPD1-201ENST00000381337 TPM1P09493 284 aa13.72□□□□□ -0.21
THUMPD1-201ENST00000381337 PPP4R3BQ5MIZ7 849 aa13.72□□□□□ -0.21
THUMPD1-201ENST00000381337 NOC3LQ8WTT2 800 aaKnown RBP13.72□□□□□ -0.21
THUMPD1-201ENST00000381337 PRIMPOLQ96LW4 560 aa13.72□□□□□ -0.21
THUMPD1-201ENST00000381337 HSP90B2PQ58FF3 399 aa13.72□□□□□ -0.21
THUMPD1-201ENST00000381337 NGDNQ8NEJ9 315 aaKnown RBP13.72□□□□□ -0.21
THUMPD1-201ENST00000381337 HECW1Q76N89 1606 aa13.72□□□□□ -0.21
THUMPD1-201ENST00000381337 GNAI2P04899 355 aa13.72□□□□□ -0.21
THUMPD1-201ENST00000381337 PSMA5P28066 241 aa13.72□□□□□ -0.21
THUMPD1-201ENST00000381337 FOSBP53539 338 aa13.72□□□□□ -0.21
THUMPD1-201ENST00000381337 UPF3BQ9BZI7 483 aaKnown RBP13.72□□□□□ -0.21
THUMPD1-201ENST00000381337 HS1BP3Q53T59 392 aa13.71□□□□□ -0.21
THUMPD1-201ENST00000381337 DISP3Q9P2K9 1392 aa13.71□□□□□ -0.21
THUMPD1-201ENST00000381337 HDAC1Q13547 482 aaPredicted RBP13.71□□□□□ -0.21
THUMPD1-201ENST00000381337 AEBP1Q8IUX7 1158 aa13.71□□□□□ -0.21
THUMPD1-201ENST00000381337 CCDC183Q5T5S1 534 aa13.71□□□□□ -0.21
THUMPD1-201ENST00000381337 SMC5Q8IY18 1101 aa13.71□□□□□ -0.21
THUMPD1-201ENST00000381337 CCDC9Q9Y3X0 531 aaKnown RBP13.71□□□□□ -0.21
THUMPD1-201ENST00000381337 PLEKHH1Q9ULM0 1364 aa13.71□□□□□ -0.22
THUMPD1-201ENST00000381337 RAB3GAP1Q15042 981 aa13.71□□□□□ -0.22
THUMPD1-201ENST00000381337 CPLX2Q6PUV4 134 aaKnown RBP13.71□□□□□ -0.22
THUMPD1-201ENST00000381337 CLASRPQ8N2M8 674 aaKnown RBP13.71□□□□□ -0.22
THUMPD1-201ENST00000381337 FMNL2Q96PY5 1086 aa13.71□□□□□ -0.22
THUMPD1-201ENST00000381337 NUP62CLQ9H1M0 184 aa13.71□□□□□ -0.22
THUMPD1-201ENST00000381337 LRSAM1Q6UWE0 723 aa13.7□□□□□ -0.22
THUMPD1-201ENST00000381337 LRRCC1Q9C099 1032 aa13.7□□□□□ -0.22
THUMPD1-201ENST00000381337 CGNQ9P2M7 1197 aaKnown RBP13.7□□□□□ -0.22
THUMPD1-201ENST00000381337 G3BP1Q13283 466 aaKnown RBP eCLIP13.7□□□□□ -0.22
THUMPD1-201ENST00000381337 TSR1Q2NL82 804 aaKnown RBP13.7□□□□□ -0.22
THUMPD1-201ENST00000381337 LARP1BQ659C4 914 aaKnown RBP13.7□□□□□ -0.22
THUMPD1-201ENST00000381337 POLA1P09884 1462 aaPredicted RBP13.7□□□□□ -0.22
THUMPD1-201ENST00000381337 ERICH4A6NGS2 130 aa13.7□□□□□ -0.22
THUMPD1-201ENST00000381337 CPLX1O14810 134 aa13.7□□□□□ -0.22
THUMPD1-201ENST00000381337 ALDH1L2Q3SY69 923 aa13.7□□□□□ -0.22
THUMPD1-201ENST00000381337 FILIP1Q7Z7B0 1213 aa13.7□□□□□ -0.22
THUMPD1-201ENST00000381337 SLC4A2P04920 1241 aa13.69□□□□□ -0.22
THUMPD1-201ENST00000381337 AFAP1Q8N556 730 aa13.69□□□□□ -0.22
THUMPD1-201ENST00000381337 NSD3Q9BZ95 1437 aa13.69□□□□□ -0.22
THUMPD1-201ENST00000381337 SPDYE4A6NLX3 237 aa13.69□□□□□ -0.22
THUMPD1-201ENST00000381337 TULP1O00294 542 aaPredicted RBP13.69□□□□□ -0.22
THUMPD1-201ENST00000381337 SMC2O95347 1197 aa13.69□□□□□ -0.22
THUMPD1-201ENST00000381337 GDPD2Q9HCC8 539 aa13.69□□□□□ -0.22
THUMPD1-201ENST00000381337 CYP46A1Q9Y6A2 500 aa13.69□□□□□ -0.22
THUMPD1-201ENST00000381337 PES1O00541 588 aaKnown RBP13.69□□□□□ -0.22
THUMPD1-201ENST00000381337 ADCY5O95622 1261 aa13.69□□□□□ -0.22
THUMPD1-201ENST00000381337 PRIM1P49642 420 aaKnown RBP13.68□□□□□ -0.22
THUMPD1-201ENST00000381337 ACBD3Q9H3P7 528 aa13.68□□□□□ -0.22
THUMPD1-201ENST00000381337 PER1O15534 1290 aaPredicted RBP13.68□□□□□ -0.22
THUMPD1-201ENST00000381337 TEFQ10587 303 aa13.68□□□□□ -0.22
THUMPD1-201ENST00000381337 MAP3K11Q16584 847 aa13.68□□□□□ -0.22
THUMPD1-201ENST00000381337 RBM42Q9BTD8 480 aaKnown RBP13.68□□□□□ -0.22
THUMPD1-201ENST00000381337 SYNE3Q6ZMZ3 975 aa13.68□□□□□ -0.22
THUMPD1-201ENST00000381337 FCHSD2O94868 740 aa13.67□□□□□ -0.22
THUMPD1-201ENST00000381337 RLBP1P12271 317 aa13.67□□□□□ -0.22
THUMPD1-201ENST00000381337 NUCB1Q02818 461 aa13.67□□□□□ -0.22
THUMPD1-201ENST00000381337 MAPK8IP2Q13387 824 aaPredicted RBP13.67□□□□□ -0.22
THUMPD1-201ENST00000381337 CCDC70Q6NSX1 233 aa13.67□□□□□ -0.22
THUMPD1-201ENST00000381337 GAS2L2Q8NHY3 880 aa13.67□□□□□ -0.22
THUMPD1-201ENST00000381337 TNNQ9UQP3 1299 aa13.67□□□□□ -0.22
THUMPD1-201ENST00000381337 CEBPZQ03701 1054 aaKnown RBP13.66□□□□□ -0.22
THUMPD1-201ENST00000381337 NOLC1Q14978 699 aaKnown RBP eCLIP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms