RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 XRN1Q8IZH2 1706 aaKnown RBP22.72■■□□□ 1.23
RPAIN-203ENST00000381209 KIF20BQ96Q89 1820 aa22.72■■□□□ 1.23
RPAIN-203ENST00000381209 E9PSI1 815 aa22.71■■□□□ 1.23
RPAIN-203ENST00000381209 U2AF1L5P0DN76 240 aaPredicted RBP22.71■■□□□ 1.23
RPAIN-203ENST00000381209 U2AF1Q01081 240 aaKnown RBP eCLIP22.71■■□□□ 1.23
RPAIN-203ENST00000381209 AATKQ6ZMQ8 1374 aa22.71■■□□□ 1.23
RPAIN-203ENST00000381209 IQSEC2Q5JU85 1478 aa22.71■■□□□ 1.23
RPAIN-203ENST00000381209 CCDC27Q2M243 656 aa22.69■■□□□ 1.22
RPAIN-203ENST00000381209 NME9Q86XW9 330 aa22.69■■□□□ 1.22
RPAIN-203ENST00000381209 TCP11L2Q8N4U5 519 aa22.69■■□□□ 1.22
RPAIN-203ENST00000381209 PHF23Q9BUL5 403 aaPredicted RBP22.69■■□□□ 1.22
RPAIN-203ENST00000381209 DIAPH1O60610 1272 aaKnown RBP22.68■■□□□ 1.22
RPAIN-203ENST00000381209 KCNA6P17658 529 aa22.68■■□□□ 1.22
RPAIN-203ENST00000381209 COG3Q96JB2 828 aa22.68■■□□□ 1.22
RPAIN-203ENST00000381209 POLKQ9UBT6 870 aa22.68■■□□□ 1.22
RPAIN-203ENST00000381209 MON2Q7Z3U7 1717 aa22.68■■□□□ 1.22
RPAIN-203ENST00000381209 TOPAZ1Q8N9V7 1692 aa22.68■■□□□ 1.22
RPAIN-203ENST00000381209 WWC1Q8IX03 1113 aa22.67■■□□□ 1.22
RPAIN-203ENST00000381209 ACEP12821 1306 aa22.67■■□□□ 1.22
RPAIN-203ENST00000381209 PNNQ9H307 717 aaKnown RBP22.66■■□□□ 1.22
RPAIN-203ENST00000381209 TTC21BQ7Z4L5 1316 aa22.66■■□□□ 1.22
RPAIN-203ENST00000381209 ANKARQ7Z5J8 1434 aa22.65■■□□□ 1.22
RPAIN-203ENST00000381209 AKAP12Q02952 1782 aa22.65■■□□□ 1.22
RPAIN-203ENST00000381209 USP6P35125 1406 aa22.64■■□□□ 1.22
RPAIN-203ENST00000381209 WDR63Q8IWG1 891 aa22.64■■□□□ 1.21
RPAIN-203ENST00000381209 U2SURPO15042 1029 aaKnown RBP22.63■■□□□ 1.21
RPAIN-203ENST00000381209 PLEKHF1Q96S99 279 aa22.63■■□□□ 1.21
RPAIN-203ENST00000381209 SETD1BQ9UPS6 1966 aaKnown RBP22.63■■□□□ 1.21
RPAIN-203ENST00000381209 NKTRP30414 1462 aaKnown RBP22.63■■□□□ 1.21
RPAIN-203ENST00000381209 SSH2Q76I76 1423 aa22.62■■□□□ 1.21
RPAIN-203ENST00000381209 ITSN1Q15811 1721 aa22.62■■□□□ 1.21
RPAIN-203ENST00000381209 SPINK5Q9NQ38 1064 aaPredicted RBP22.62■■□□□ 1.21
RPAIN-203ENST00000381209 NPHP4O75161 1426 aaPredicted RBP22.61■■□□□ 1.21
RPAIN-203ENST00000381209 NUTM2FA1L443 756 aa22.61■■□□□ 1.21
RPAIN-203ENST00000381209 ZRANB1Q9UGI0 708 aa22.61■■□□□ 1.21
RPAIN-203ENST00000381209 TTC21AQ8NDW8 1320 aa22.6■■□□□ 1.21
RPAIN-203ENST00000381209 CDK12Q9NYV4 1490 aaPredicted RBP22.6■■□□□ 1.21
RPAIN-203ENST00000381209 NRKQ7Z2Y5 1582 aa22.59■■□□□ 1.21
RPAIN-203ENST00000381209 FCHSD2O94868 740 aa22.59■■□□□ 1.21
RPAIN-203ENST00000381209 RRP7AQ9Y3A4 280 aaKnown RBP22.58■■□□□ 1.21
RPAIN-203ENST00000381209 DMRT2Q9Y5R5 561 aa22.58■■□□□ 1.21
RPAIN-203ENST00000381209 OVOS2A0A0J9YW53 1432 aa22.58■■□□□ 1.2
RPAIN-203ENST00000381209 OVOS2Q6IE36 1432 aa22.58■■□□□ 1.2
RPAIN-203ENST00000381209 B4GALNT3Q6L9W6 998 aa22.57■■□□□ 1.2
RPAIN-203ENST00000381209 MAPK8IP3Q9UPT6 1336 aa22.57■■□□□ 1.2
RPAIN-203ENST00000381209 NEUROD2Q15784 382 aa22.57■■□□□ 1.2
RPAIN-203ENST00000381209 EMILIN1Q9Y6C2 1016 aa22.57■■□□□ 1.2
RPAIN-203ENST00000381209 FBLN1P23142 703 aa22.56■■□□□ 1.2
RPAIN-203ENST00000381209 USP31Q70CQ4 1352 aa22.55■■□□□ 1.2
RPAIN-203ENST00000381209 PPM1GO15355 546 aaPredicted RBP22.55■■□□□ 1.2
RPAIN-203ENST00000381209 IL13P35225 146 aa22.55■■□□□ 1.2
RPAIN-203ENST00000381209 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.55■■□□□ 1.2
RPAIN-203ENST00000381209 NGDNQ8NEJ9 315 aaKnown RBP22.55■■□□□ 1.2
RPAIN-203ENST00000381209 TMPOP42166 694 aaKnown RBP22.54■■□□□ 1.2
RPAIN-203ENST00000381209 PMFBP1Q8TBY8 1022 aa22.54■■□□□ 1.2
RPAIN-203ENST00000381209 CHD2O14647 1828 aaKnown RBP22.53■■□□□ 1.2
RPAIN-203ENST00000381209 CCDC136Q96JN2 1154 aa22.52■■□□□ 1.2
RPAIN-203ENST00000381209 RSPH6AQ9H0K4 717 aa22.52■■□□□ 1.2
RPAIN-203ENST00000381209 EXOC6Q8TAG9 804 aa22.52■■□□□ 1.19
RPAIN-203ENST00000381209 MYH16Q9H6N6 1097 aa22.51■■□□□ 1.19
RPAIN-203ENST00000381209 TSHZ2Q9NRE2 1034 aa22.51■■□□□ 1.19
RPAIN-203ENST00000381209 NEFMP07197 916 aa22.5■■□□□ 1.19
RPAIN-203ENST00000381209 RRS1Q15050 365 aaKnown RBP22.5■■□□□ 1.19
RPAIN-203ENST00000381209 IL16Q14005 1332 aa22.49■■□□□ 1.19
RPAIN-203ENST00000381209 ADGRL3Q9HAR2 1447 aa22.49■■□□□ 1.19
RPAIN-203ENST00000381209 FMN2Q9NZ56 1722 aa22.49■■□□□ 1.19
RPAIN-203ENST00000381209 PLIN1O60240 522 aa22.49■■□□□ 1.19
RPAIN-203ENST00000381209 TRIM35Q9UPQ4 493 aa22.48■■□□□ 1.19
RPAIN-203ENST00000381209 PRKAR2BP31323 418 aa22.47■■□□□ 1.19
RPAIN-203ENST00000381209 RIPK4P57078 832 aa22.46■■□□□ 1.19
RPAIN-203ENST00000381209 LRRC7Q96NW7 1537 aa22.45■■□□□ 1.18
RPAIN-203ENST00000381209 NWD1Q149M9 1564 aa22.45■■□□□ 1.18
RPAIN-203ENST00000381209 MAP2P11137 1827 aaKnown RBP22.44■■□□□ 1.18
RPAIN-203ENST00000381209 CRBNQ96SW2 442 aa22.44■■□□□ 1.18
RPAIN-203ENST00000381209 PHF8Q9UPP1 1060 aa22.44■■□□□ 1.18
RPAIN-203ENST00000381209 NALCNQ8IZF0 1738 aa22.43■■□□□ 1.18
RPAIN-203ENST00000381209 CT47B1P0C2W7 299 aaPredicted RBP22.43■■□□□ 1.18
RPAIN-203ENST00000381209 NFE2L2Q16236 605 aa22.42■■□□□ 1.18
RPAIN-203ENST00000381209 HMOX1P09601 288 aa22.41■■□□□ 1.18
RPAIN-203ENST00000381209 EIF4A2Q14240 407 aaKnown RBP22.41■■□□□ 1.18
RPAIN-203ENST00000381209 BCAR3O75815 825 aa22.4■■□□□ 1.18
RPAIN-203ENST00000381209 C20orf194Q5TEA3 1177 aa22.4■■□□□ 1.18
RPAIN-203ENST00000381209 RARSP54136 660 aaKnown RBP22.39■■□□□ 1.17
RPAIN-203ENST00000381209 SBNO1A3KN83 1393 aa22.39■■□□□ 1.17
RPAIN-203ENST00000381209 KIF24Q5T7B8 1368 aa22.38■■□□□ 1.17
RPAIN-203ENST00000381209 MAP3K19Q56UN5 1328 aa22.38■■□□□ 1.17
RPAIN-203ENST00000381209 FANCIQ9NVI1 1328 aa22.38■■□□□ 1.17
RPAIN-203ENST00000381209 NLRP6P59044 892 aa22.38■■□□□ 1.17
RPAIN-203ENST00000381209 PHACTR3Q96KR7 559 aa22.38■■□□□ 1.17
RPAIN-203ENST00000381209 CALD1Q05682 793 aaKnown RBP22.37■■□□□ 1.17
RPAIN-203ENST00000381209 PDE3AQ14432 1141 aa22.37■■□□□ 1.17
RPAIN-203ENST00000381209 FLT4P35916 1363 aa22.37■■□□□ 1.17
RPAIN-203ENST00000381209 LMOD3Q0VAK6 560 aa22.36■■□□□ 1.17
RPAIN-203ENST00000381209 C14orf37Q86TY3 774 aa22.36■■□□□ 1.17
RPAIN-203ENST00000381209 RBM33Q96EV2 1170 aaKnown RBP22.36■■□□□ 1.17
RPAIN-203ENST00000381209 RGPD8O14715 1765 aaPredicted RBP22.36■■□□□ 1.17
RPAIN-203ENST00000381209 PIK3C2AO00443 1686 aa22.36■■□□□ 1.17
RPAIN-203ENST00000381209 PROSER2Q86WR7 435 aaPredicted RBP22.36■■□□□ 1.17
RPAIN-203ENST00000381209 HSP90AB2PQ58FF8 381 aa22.35■■□□□ 1.17
RPAIN-203ENST00000381209 ESCO1Q5FWF5 840 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms