RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 HAP1P54257 671 aaPredicted RBP27.1■■□□□ 1.93
GTF3A-201ENST00000381140 MARF1Q9Y4F3 1742 aaKnown RBP27.1■■□□□ 1.93
GTF3A-201ENST00000381140 CABLES1Q8TDN4 633 aa27.09■■□□□ 1.93
GTF3A-201ENST00000381140 SLC12A5Q9H2X9 1139 aa27.09■■□□□ 1.93
GTF3A-201ENST00000381140 USP6P35125 1406 aa27.08■■□□□ 1.93
GTF3A-201ENST00000381140 NUTM2GQ5VZR2 741 aa27.08■■□□□ 1.93
GTF3A-201ENST00000381140 MON2Q7Z3U7 1717 aa27.07■■□□□ 1.92
GTF3A-201ENST00000381140 PUS7Q96PZ0 661 aaKnown RBP27.07■■□□□ 1.92
GTF3A-201ENST00000381140 C8orf37Q96NL8 207 aa27.06■■□□□ 1.92
GTF3A-201ENST00000381140 POLR3GLQ9BT43 218 aa27.06■■□□□ 1.92
GTF3A-201ENST00000381140 KTN1Q86UP2 1357 aaKnown RBP27.05■■□□□ 1.92
GTF3A-201ENST00000381140 CDCA8Q53HL2 280 aa27.05■■□□□ 1.92
GTF3A-201ENST00000381140 ABTB2Q8N961 1025 aa27.04■■□□□ 1.92
GTF3A-201ENST00000381140 CPSF1Q10570 1443 aaKnown RBP27.03■■□□□ 1.92
GTF3A-201ENST00000381140 HDGFL2Q7Z4V5 671 aaPredicted RBP27.03■■□□□ 1.92
GTF3A-201ENST00000381140 ZNF692Q9BU19 519 aaPredicted RBP27.03■■□□□ 1.92
GTF3A-201ENST00000381140 CRYBG1Q9Y4K1 1723 aa27.02■■□□□ 1.92
GTF3A-201ENST00000381140 CD163L1Q9NR16 1453 aa27.02■■□□□ 1.92
GTF3A-201ENST00000381140 NRKQ7Z2Y5 1582 aa27.02■■□□□ 1.92
GTF3A-201ENST00000381140 TERF2IPQ9NYB0 399 aa27.01■■□□□ 1.91
GTF3A-201ENST00000381140 NGLY1Q96IV0 654 aa27■■□□□ 1.91
GTF3A-201ENST00000381140 PHRF1Q9P1Y6 1649 aaKnown RBP27■■□□□ 1.91
GTF3A-201ENST00000381140 BRD4O60885 1362 aaPredicted RBP27■■□□□ 1.91
GTF3A-201ENST00000381140 MYOM1P52179 1685 aa27■■□□□ 1.91
GTF3A-201ENST00000381140 PIK3C2AO00443 1686 aa26.99■■□□□ 1.91
GTF3A-201ENST00000381140 A0A1W2PP64 1363 aa26.99■■□□□ 1.91
GTF3A-201ENST00000381140 NINLQ9Y2I6 1382 aa26.99■■□□□ 1.91
GTF3A-201ENST00000381140 RGS17Q9UGC6 210 aaPredicted RBP26.98■■□□□ 1.91
GTF3A-201ENST00000381140 AFF2P51816 1311 aa26.98■■□□□ 1.91
GTF3A-201ENST00000381140 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.97■■□□□ 1.91
GTF3A-201ENST00000381140 TTC21BQ7Z4L5 1316 aa26.97■■□□□ 1.91
GTF3A-201ENST00000381140 SSH2Q76I76 1423 aa26.97■■□□□ 1.91
GTF3A-201ENST00000381140 NLRP6P59044 892 aa26.95■■□□□ 1.9
GTF3A-201ENST00000381140 NLRP13Q86W25 1043 aa26.94■■□□□ 1.9
GTF3A-201ENST00000381140 TTC21AQ8NDW8 1320 aa26.93■■□□□ 1.9
GTF3A-201ENST00000381140 PLCH1Q4KWH8 1693 aa26.92■■□□□ 1.9
GTF3A-201ENST00000381140 EDC4Q6P2E9 1401 aaKnown RBP26.91■■□□□ 1.9
GTF3A-201ENST00000381140 ANKRD36BQ8N2N9 1353 aa26.91■■□□□ 1.9
GTF3A-201ENST00000381140 ZNF772Q68DY9 489 aaPredicted RBP26.91■■□□□ 1.9
GTF3A-201ENST00000381140 POTEAQ6S8J7 498 aa26.9■■□□□ 1.9
GTF3A-201ENST00000381140 C11orf95C9JLR9 678 aaPredicted RBP26.89■■□□□ 1.9
GTF3A-201ENST00000381140 NME9Q86XW9 330 aa26.89■■□□□ 1.9
GTF3A-201ENST00000381140 USP19O94966 1318 aa26.88■■□□□ 1.89
GTF3A-201ENST00000381140 ZC3H6P61129 1189 aaKnown RBP26.88■■□□□ 1.89
GTF3A-201ENST00000381140 ZRANB1Q9UGI0 708 aa26.88■■□□□ 1.89
GTF3A-201ENST00000381140 USP21Q9UK80 565 aa26.88■■□□□ 1.89
GTF3A-201ENST00000381140 SOX12O15370 315 aa26.86■■□□□ 1.89
GTF3A-201ENST00000381140 COL14A1Q05707 1796 aaKnown RBP26.86■■□□□ 1.89
GTF3A-201ENST00000381140 ZBTB7CA1YPR0 619 aa26.85■■□□□ 1.89
GTF3A-201ENST00000381140 FAM83GA6ND36 823 aa26.85■■□□□ 1.89
GTF3A-201ENST00000381140 ILDR2Q71H61 639 aa26.85■■□□□ 1.89
GTF3A-201ENST00000381140 PRDM11Q9NQV5 511 aa26.85■■□□□ 1.89
GTF3A-201ENST00000381140 KIAA0232Q92628 1395 aa26.85■■□□□ 1.89
GTF3A-201ENST00000381140 FNBP4Q8N3X1 1017 aaPredicted RBP26.84■■□□□ 1.89
GTF3A-201ENST00000381140 SLIT3O75094 1523 aa26.84■■□□□ 1.89
GTF3A-201ENST00000381140 NWD2Q9ULI1 1742 aa26.84■■□□□ 1.89
GTF3A-201ENST00000381140 KIF20BQ96Q89 1820 aa26.84■■□□□ 1.89
GTF3A-201ENST00000381140 GCP02774 474 aa26.84■■□□□ 1.89
GTF3A-201ENST00000381140 CHRNA2Q15822 529 aa26.84■■□□□ 1.89
GTF3A-201ENST00000381140 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.82■■□□□ 1.88
GTF3A-201ENST00000381140 QTRT2Q9H974 415 aaKnown RBP26.82■■□□□ 1.88
GTF3A-201ENST00000381140 SLIT2O94813 1529 aa26.82■■□□□ 1.88
GTF3A-201ENST00000381140 USP54Q70EL1 1684 aa26.81■■□□□ 1.88
GTF3A-201ENST00000381140 KIF7Q2M1P5 1343 aa26.81■■□□□ 1.88
GTF3A-201ENST00000381140 BCL9LQ86UU0 1499 aa26.8■■□□□ 1.88
GTF3A-201ENST00000381140 NSD3Q9BZ95 1437 aa26.79■■□□□ 1.88
GTF3A-201ENST00000381140 NRAPQ86VF7 1730 aa26.78■■□□□ 1.88
GTF3A-201ENST00000381140 USP31Q70CQ4 1352 aa26.78■■□□□ 1.88
GTF3A-201ENST00000381140 UNC5CLQ8IV45 518 aa26.78■■□□□ 1.88
GTF3A-201ENST00000381140 CARD14Q9BXL6 1004 aa26.78■■□□□ 1.88
GTF3A-201ENST00000381140 BTG4Q9NY30 223 aa26.78■■□□□ 1.88
GTF3A-201ENST00000381140 TRPC5Q9UL62 973 aaPredicted RBP26.77■■□□□ 1.88
GTF3A-201ENST00000381140 KCNH5Q8NCM2 988 aa26.76■■□□□ 1.87
GTF3A-201ENST00000381140 LTN1O94822 1766 aa26.76■■□□□ 1.87
GTF3A-201ENST00000381140 RXRBP28702 533 aa26.75■■□□□ 1.87
GTF3A-201ENST00000381140 PANK3Q9H999 370 aa26.75■■□□□ 1.87
GTF3A-201ENST00000381140 CPDO75976 1380 aa26.75■■□□□ 1.87
GTF3A-201ENST00000381140 ATRNO75882 1429 aa26.75■■□□□ 1.87
GTF3A-201ENST00000381140 RGPD5Q99666 1765 aa26.74■■□□□ 1.87
GTF3A-201ENST00000381140 COG3Q96JB2 828 aa26.74■■□□□ 1.87
GTF3A-201ENST00000381140 GGNBP2Q9H3C7 697 aa26.74■■□□□ 1.87
GTF3A-201ENST00000381140 CCDC9Q9Y3X0 531 aaKnown RBP26.74■■□□□ 1.87
GTF3A-201ENST00000381140 OVOS2A0A0J9YW53 1432 aa26.74■■□□□ 1.87
GTF3A-201ENST00000381140 OVOS2Q6IE36 1432 aa26.74■■□□□ 1.87
GTF3A-201ENST00000381140 NFAT5O94916 1531 aa26.74■■□□□ 1.87
GTF3A-201ENST00000381140 CCDC7Q96M83 1385 aa26.73■■□□□ 1.87
GTF3A-201ENST00000381140 LMO7Q8WWI1 1683 aa26.72■■□□□ 1.87
GTF3A-201ENST00000381140 FYB1O15117 783 aa26.71■■□□□ 1.87
GTF3A-201ENST00000381140 STRN4Q9NRL3 753 aa26.71■■□□□ 1.87
GTF3A-201ENST00000381140 RBM6P78332 1123 aaKnown RBP26.71■■□□□ 1.87
GTF3A-201ENST00000381140 WASHC2AQ641Q2 1341 aa26.7■■□□□ 1.86
GTF3A-201ENST00000381140 COL18A1P39060 1754 aa26.7■■□□□ 1.86
GTF3A-201ENST00000381140 CAMTA1Q9Y6Y1 1673 aa26.69■■□□□ 1.86
GTF3A-201ENST00000381140 CGNL1Q0VF96 1302 aa26.68■■□□□ 1.86
GTF3A-201ENST00000381140 EVA1CP58658 441 aa26.68■■□□□ 1.86
GTF3A-201ENST00000381140 VPS72Q15906 364 aa26.67■■□□□ 1.86
GTF3A-201ENST00000381140 ARHGEF25Q86VW2 580 aa26.67■■□□□ 1.86
GTF3A-201ENST00000381140 GJD4Q96KN9 370 aaPredicted RBP26.67■■□□□ 1.86
GTF3A-201ENST00000381140 GLI3P10071 1580 aa26.66■■□□□ 1.86
GTF3A-201ENST00000381140 ANKRD26Q9UPS8 1709 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms