RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 WDR43Q15061 677 aaKnown RBP eCLIP10.72□□□□□ -0.69
ERCC8-202ENST00000381118 USP6P35125 1406 aa10.72□□□□□ -0.69
ERCC8-202ENST00000381118 ESCO1Q5FWF5 840 aa10.72□□□□□ -0.69
ERCC8-202ENST00000381118 ADAMTS8Q9UP79 889 aa10.71□□□□□ -0.69
ERCC8-202ENST00000381118 XIRP1Q702N8 1843 aaKnown RBP10.71□□□□□ -0.7
ERCC8-202ENST00000381118 TTC21BQ7Z4L5 1316 aa10.71□□□□□ -0.7
ERCC8-202ENST00000381118 ZNF335Q9H4Z2 1342 aaPredicted RBP10.71□□□□□ -0.7
ERCC8-202ENST00000381118 ADRA2BP18089 450 aa10.7□□□□□ -0.7
ERCC8-202ENST00000381118 SALL2Q9Y467 1007 aaPredicted RBP10.7□□□□□ -0.7
ERCC8-202ENST00000381118 POLR3AO14802 1390 aaPredicted RBP10.7□□□□□ -0.7
ERCC8-202ENST00000381118 SHPRHQ149N8 1683 aa10.7□□□□□ -0.7
ERCC8-202ENST00000381118 PPM1GO15355 546 aaPredicted RBP10.7□□□□□ -0.7
ERCC8-202ENST00000381118 COG3Q96JB2 828 aa10.7□□□□□ -0.7
ERCC8-202ENST00000381118 PHF8Q9UPP1 1060 aa10.7□□□□□ -0.7
ERCC8-202ENST00000381118 ORAI2Q96SN7 254 aa10.69□□□□□ -0.7
ERCC8-202ENST00000381118 C19orf44Q9H6X5 657 aa10.69□□□□□ -0.7
ERCC8-202ENST00000381118 SOX12O15370 315 aa10.69□□□□□ -0.7
ERCC8-202ENST00000381118 PAK3O75914 559 aaPredicted RBP10.69□□□□□ -0.7
ERCC8-202ENST00000381118 ATF3P18847 181 aa10.68□□□□□ -0.7
ERCC8-202ENST00000381118 ZBED9Q6R2W3 1325 aa10.68□□□□□ -0.7
ERCC8-202ENST00000381118 PIK3C2AO00443 1686 aa10.68□□□□□ -0.7
ERCC8-202ENST00000381118 NUTM2GQ5VZR2 741 aa10.68□□□□□ -0.7
ERCC8-202ENST00000381118 CFAP53Q96M91 514 aa10.68□□□□□ -0.7
ERCC8-202ENST00000381118 RRS1Q15050 365 aaKnown RBP10.67□□□□□ -0.7
ERCC8-202ENST00000381118 CCDC146Q8IYE0 955 aa10.67□□□□□ -0.7
ERCC8-202ENST00000381118 SSH2Q76I76 1423 aa10.67□□□□□ -0.7
ERCC8-202ENST00000381118 BLMP54132 1417 aaPredicted RBP10.66□□□□□ -0.7
ERCC8-202ENST00000381118 XPCQ01831 940 aaPredicted RBP10.66□□□□□ -0.7
ERCC8-202ENST00000381118 EMILIN1Q9Y6C2 1016 aa10.66□□□□□ -0.7
ERCC8-202ENST00000381118 C1orf167Q5SNV9 1468 aa10.66□□□□□ -0.7
ERCC8-202ENST00000381118 MSH6P52701 1360 aa10.66□□□□□ -0.7
ERCC8-202ENST00000381118 FOXO3O43524 673 aa10.66□□□□□ -0.7
ERCC8-202ENST00000381118 PSME1Q06323 249 aa10.66□□□□□ -0.7
ERCC8-202ENST00000381118 LRRC7Q96NW7 1537 aa10.66□□□□□ -0.7
ERCC8-202ENST00000381118 OVOS2A0A0J9YW53 1432 aa10.65□□□□□ -0.7
ERCC8-202ENST00000381118 OVOS2Q6IE36 1432 aa10.65□□□□□ -0.7
ERCC8-202ENST00000381118 TTC21AQ8NDW8 1320 aa10.65□□□□□ -0.7
ERCC8-202ENST00000381118 ABTB2Q8N961 1025 aa10.65□□□□□ -0.7
ERCC8-202ENST00000381118 POLKQ9UBT6 870 aa10.65□□□□□ -0.7
ERCC8-202ENST00000381118 MST1RQ04912 1400 aa10.64□□□□□ -0.71
ERCC8-202ENST00000381118 U2SURPO15042 1029 aaKnown RBP10.64□□□□□ -0.71
ERCC8-202ENST00000381118 PLEKHG5O94827 1062 aa10.64□□□□□ -0.71
ERCC8-202ENST00000381118 NLRP6P59044 892 aa10.64□□□□□ -0.71
ERCC8-202ENST00000381118 DMRT2Q9Y5R5 561 aa10.64□□□□□ -0.71
ERCC8-202ENST00000381118 MARF1Q9Y4F3 1742 aaKnown RBP10.64□□□□□ -0.71
ERCC8-202ENST00000381118 NCOA3Q9Y6Q9 1424 aa10.64□□□□□ -0.71
ERCC8-202ENST00000381118 SCAF1Q9H7N4 1312 aaKnown RBP10.64□□□□□ -0.71
ERCC8-202ENST00000381118 CADPS2Q86UW7 1296 aa10.64□□□□□ -0.71
ERCC8-202ENST00000381118 COL3A1P02461 1466 aaPredicted RBP10.63□□□□□ -0.71
ERCC8-202ENST00000381118 KIF1AQ12756 1690 aa10.63□□□□□ -0.71
ERCC8-202ENST00000381118 DCCP43146 1447 aa10.63□□□□□ -0.71
ERCC8-202ENST00000381118 U2AF1L5P0DN76 240 aaPredicted RBP10.63□□□□□ -0.71
ERCC8-202ENST00000381118 U2AF1Q01081 240 aaKnown RBP eCLIP10.63□□□□□ -0.71
ERCC8-202ENST00000381118 DDX17Q92841 729 aaKnown RBP10.63□□□□□ -0.71
ERCC8-202ENST00000381118 LMOD2Q6P5Q4 547 aa10.62□□□□□ -0.71
ERCC8-202ENST00000381118 GTF3C3Q9Y5Q9 886 aa10.62□□□□□ -0.71
ERCC8-202ENST00000381118 AATKQ6ZMQ8 1374 aa10.62□□□□□ -0.71
ERCC8-202ENST00000381118 DIAPH1O60610 1272 aaKnown RBP10.62□□□□□ -0.71
ERCC8-202ENST00000381118 NUDCQ9Y266 331 aa10.61□□□□□ -0.71
ERCC8-202ENST00000381118 INSRP06213 1382 aa10.61□□□□□ -0.71
ERCC8-202ENST00000381118 PEAK1Q9H792 1746 aa10.61□□□□□ -0.71
ERCC8-202ENST00000381118 APAF1O14727 1248 aa10.61□□□□□ -0.71
ERCC8-202ENST00000381118 USP31Q70CQ4 1352 aa10.61□□□□□ -0.71
ERCC8-202ENST00000381118 PNPLA6Q8IY17 1366 aa10.61□□□□□ -0.71
ERCC8-202ENST00000381118 CDK12Q9NYV4 1490 aaPredicted RBP10.61□□□□□ -0.71
ERCC8-202ENST00000381118 SMG6Q86US8 1419 aaKnown RBP10.6□□□□□ -0.71
ERCC8-202ENST00000381118 TRPM3Q9HCF6 1732 aaPredicted RBP10.6□□□□□ -0.71
ERCC8-202ENST00000381118 KRT28Q7Z3Y7 464 aa10.6□□□□□ -0.71
ERCC8-202ENST00000381118 LTN1O94822 1766 aa10.6□□□□□ -0.71
ERCC8-202ENST00000381118 NEUROD2Q15784 382 aa10.6□□□□□ -0.71
ERCC8-202ENST00000381118 USP54Q70EL1 1684 aa10.6□□□□□ -0.71
ERCC8-202ENST00000381118 RRP7AQ9Y3A4 280 aaKnown RBP10.58□□□□□ -0.72
ERCC8-202ENST00000381118 MAP3K19Q56UN5 1328 aa10.58□□□□□ -0.72
ERCC8-202ENST00000381118 ZBTB7CA1YPR0 619 aa10.58□□□□□ -0.72
ERCC8-202ENST00000381118 HMOX1P09601 288 aa10.58□□□□□ -0.72
ERCC8-202ENST00000381118 HSP90AB2PQ58FF8 381 aa10.58□□□□□ -0.72
ERCC8-202ENST00000381118 RUNDC1Q96C34 613 aa10.58□□□□□ -0.72
ERCC8-202ENST00000381118 CDCA7LQ96GN5 454 aa10.58□□□□□ -0.72
ERCC8-202ENST00000381118 AMPHP49418 695 aa10.57□□□□□ -0.72
ERCC8-202ENST00000381118 SLAIN2Q9P270 581 aa10.57□□□□□ -0.72
ERCC8-202ENST00000381118 IL13P35225 146 aa10.57□□□□□ -0.72
ERCC8-202ENST00000381118 BRINP3Q76B58 766 aa10.57□□□□□ -0.72
ERCC8-202ENST00000381118 ALS2Q96Q42 1657 aa10.56□□□□□ -0.72
ERCC8-202ENST00000381118 TCP11L2Q8N4U5 519 aa10.56□□□□□ -0.72
ERCC8-202ENST00000381118 NPHP3Q7Z494 1330 aa10.56□□□□□ -0.72
ERCC8-202ENST00000381118 EIF4A2Q14240 407 aaKnown RBP10.56□□□□□ -0.72
ERCC8-202ENST00000381118 SBNO1A3KN83 1393 aa10.55□□□□□ -0.72
ERCC8-202ENST00000381118 FLT4P35916 1363 aa10.55□□□□□ -0.72
ERCC8-202ENST00000381118 IQSEC2Q5JU85 1478 aa10.55□□□□□ -0.72
ERCC8-202ENST00000381118 SUPT16HQ9Y5B9 1047 aaKnown RBP10.55□□□□□ -0.72
ERCC8-202ENST00000381118 MAPK8IP3Q9UPT6 1336 aa10.55□□□□□ -0.72
ERCC8-202ENST00000381118 PRKAR2BP31323 418 aa10.54□□□□□ -0.72
ERCC8-202ENST00000381118 PLEKHF1Q96S99 279 aa10.54□□□□□ -0.72
ERCC8-202ENST00000381118 NFAT5O94916 1531 aa10.54□□□□□ -0.72
ERCC8-202ENST00000381118 PXDNQ92626 1479 aa10.54□□□□□ -0.72
ERCC8-202ENST00000381118 LTBP4Q8N2S1 1624 aa10.53□□□□□ -0.72
ERCC8-202ENST00000381118 HOXC9P31274 260 aa10.53□□□□□ -0.72
ERCC8-202ENST00000381118 KCNH5Q8NCM2 988 aa10.53□□□□□ -0.72
ERCC8-202ENST00000381118 LTV1Q96GA3 475 aaPredicted RBP10.53□□□□□ -0.72
ERCC8-202ENST00000381118 RSPH6AQ9H0K4 717 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms