RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 POLR3AO14802 1390 aaPredicted RBP14.59□□□□□ -0.07
FAM239A-201ENST00000381108 C14orf37Q86TY3 774 aa14.58□□□□□ -0.08
FAM239A-201ENST00000381108 SUPT16HQ9Y5B9 1047 aaKnown RBP14.58□□□□□ -0.08
FAM239A-201ENST00000381108 SHPRHQ149N8 1683 aa14.58□□□□□ -0.08
FAM239A-201ENST00000381108 FMN2Q9NZ56 1722 aa14.58□□□□□ -0.08
FAM239A-201ENST00000381108 CCDC146Q8IYE0 955 aa14.57□□□□□ -0.08
FAM239A-201ENST00000381108 ZRANB1Q9UGI0 708 aa14.57□□□□□ -0.08
FAM239A-201ENST00000381108 NRKQ7Z2Y5 1582 aa14.56□□□□□ -0.08
FAM239A-201ENST00000381108 FBLN1P23142 703 aa14.56□□□□□ -0.08
FAM239A-201ENST00000381108 ZNF692Q9BU19 519 aaPredicted RBP14.56□□□□□ -0.08
FAM239A-201ENST00000381108 PLEKHG3A1L390 1219 aa14.56□□□□□ -0.08
FAM239A-201ENST00000381108 CNKSR2Q8WXI2 1034 aa14.56□□□□□ -0.08
FAM239A-201ENST00000381108 CFAP53Q96M91 514 aa14.56□□□□□ -0.08
FAM239A-201ENST00000381108 NWD1Q149M9 1564 aa14.55□□□□□ -0.08
FAM239A-201ENST00000381108 LMTK3Q96Q04 1460 aa14.55□□□□□ -0.08
FAM239A-201ENST00000381108 USP6P35125 1406 aa14.55□□□□□ -0.08
FAM239A-201ENST00000381108 NGDNQ8NEJ9 315 aaKnown RBP14.55□□□□□ -0.08
FAM239A-201ENST00000381108 ADGRL3Q9HAR2 1447 aa14.54□□□□□ -0.08
FAM239A-201ENST00000381108 INSRP06213 1382 aa14.54□□□□□ -0.08
FAM239A-201ENST00000381108 PPM1GO15355 546 aaPredicted RBP14.54□□□□□ -0.08
FAM239A-201ENST00000381108 ANKARQ7Z5J8 1434 aa14.53□□□□□ -0.08
FAM239A-201ENST00000381108 TTC21BQ7Z4L5 1316 aa14.53□□□□□ -0.08
FAM239A-201ENST00000381108 PROSER2Q86WR7 435 aaPredicted RBP14.53□□□□□ -0.08
FAM239A-201ENST00000381108 COG3Q96JB2 828 aa14.53□□□□□ -0.08
FAM239A-201ENST00000381108 MAP2P11137 1827 aaKnown RBP14.52□□□□□ -0.08
FAM239A-201ENST00000381108 STRCP1A6NGW2 1772 aa14.51□□□□□ -0.09
FAM239A-201ENST00000381108 SMG6Q86US8 1419 aaKnown RBP14.5□□□□□ -0.09
FAM239A-201ENST00000381108 NEFLP07196 543 aa14.5□□□□□ -0.09
FAM239A-201ENST00000381108 NUDCQ9Y266 331 aa14.5□□□□□ -0.09
FAM239A-201ENST00000381108 COL3A1P02461 1466 aaPredicted RBP14.49□□□□□ -0.09
FAM239A-201ENST00000381108 APAF1O14727 1248 aa14.49□□□□□ -0.09
FAM239A-201ENST00000381108 U2SURPO15042 1029 aaKnown RBP14.49□□□□□ -0.09
FAM239A-201ENST00000381108 SOX12O15370 315 aa14.49□□□□□ -0.09
FAM239A-201ENST00000381108 U2AF1L5P0DN76 240 aaPredicted RBP14.49□□□□□ -0.09
FAM239A-201ENST00000381108 U2AF1Q01081 240 aaKnown RBP eCLIP14.49□□□□□ -0.09
FAM239A-201ENST00000381108 POLKQ9UBT6 870 aa14.49□□□□□ -0.09
FAM239A-201ENST00000381108 EMILIN1Q9Y6C2 1016 aa14.49□□□□□ -0.09
FAM239A-201ENST00000381108 STRCQ7RTU9 1775 aa14.49□□□□□ -0.09
FAM239A-201ENST00000381108 RRS1Q15050 365 aaKnown RBP14.49□□□□□ -0.09
FAM239A-201ENST00000381108 ESCO1Q5FWF5 840 aa14.49□□□□□ -0.09
FAM239A-201ENST00000381108 FKBP8Q14318 412 aa14.48□□□□□ -0.09
FAM239A-201ENST00000381108 CDCA7LQ96GN5 454 aa14.48□□□□□ -0.09
FAM239A-201ENST00000381108 SSH2Q76I76 1423 aa14.48□□□□□ -0.09
FAM239A-201ENST00000381108 PHF8Q9UPP1 1060 aa14.47□□□□□ -0.09
FAM239A-201ENST00000381108 OVOS2A0A0J9YW53 1432 aa14.47□□□□□ -0.09
FAM239A-201ENST00000381108 OVOS2Q6IE36 1432 aa14.47□□□□□ -0.09
FAM239A-201ENST00000381108 PIK3C2AO00443 1686 aa14.47□□□□□ -0.09
FAM239A-201ENST00000381108 PAK3O75914 559 aaPredicted RBP14.46□□□□□ -0.09
FAM239A-201ENST00000381108 TMEM94Q12767 1356 aa14.46□□□□□ -0.09
FAM239A-201ENST00000381108 DIAPH1O60610 1272 aaKnown RBP14.46□□□□□ -0.1
FAM239A-201ENST00000381108 NUTM2GQ5VZR2 741 aa14.46□□□□□ -0.1
FAM239A-201ENST00000381108 TTC21AQ8NDW8 1320 aa14.45□□□□□ -0.1
FAM239A-201ENST00000381108 IRX6P78412 446 aaPredicted RBP14.45□□□□□ -0.1
FAM239A-201ENST00000381108 NEUROD2Q15784 382 aa14.45□□□□□ -0.1
FAM239A-201ENST00000381108 AATKQ6ZMQ8 1374 aa14.45□□□□□ -0.1
FAM239A-201ENST00000381108 PNPLA6Q8IY17 1366 aa14.45□□□□□ -0.1
FAM239A-201ENST00000381108 ORAI2Q96SN7 254 aa14.44□□□□□ -0.1
FAM239A-201ENST00000381108 RRP7AQ9Y3A4 280 aaKnown RBP14.44□□□□□ -0.1
FAM239A-201ENST00000381108 RUNDC1Q96C34 613 aa14.44□□□□□ -0.1
FAM239A-201ENST00000381108 PDE3BQ13370 1112 aa14.43□□□□□ -0.1
FAM239A-201ENST00000381108 C19orf44Q9H6X5 657 aa14.43□□□□□ -0.1
FAM239A-201ENST00000381108 CDK12Q9NYV4 1490 aaPredicted RBP14.43□□□□□ -0.1
FAM239A-201ENST00000381108 NLRP6P59044 892 aa14.42□□□□□ -0.1
FAM239A-201ENST00000381108 XPCQ01831 940 aaPredicted RBP14.42□□□□□ -0.1
FAM239A-201ENST00000381108 IQSEC2Q5JU85 1478 aa14.42□□□□□ -0.1
FAM239A-201ENST00000381108 PSME1Q06323 249 aa14.41□□□□□ -0.1
FAM239A-201ENST00000381108 TCP11L2Q8N4U5 519 aa14.41□□□□□ -0.1
FAM239A-201ENST00000381108 ABTB2Q8N961 1025 aa14.41□□□□□ -0.1
FAM239A-201ENST00000381108 ZNF521Q96K83 1311 aa14.41□□□□□ -0.1
FAM239A-201ENST00000381108 FOXO3O43524 673 aa14.41□□□□□ -0.1
FAM239A-201ENST00000381108 ATF3P18847 181 aa14.41□□□□□ -0.1
FAM239A-201ENST00000381108 ZNF335Q9H4Z2 1342 aaPredicted RBP14.4□□□□□ -0.1
FAM239A-201ENST00000381108 USP31Q70CQ4 1352 aa14.4□□□□□ -0.1
FAM239A-201ENST00000381108 GOLGA2Q08379 1002 aa14.4□□□□□ -0.1
FAM239A-201ENST00000381108 C1orf167Q5SNV9 1468 aa14.4□□□□□ -0.1
FAM239A-201ENST00000381108 PEAK1Q9H792 1746 aa14.39□□□□□ -0.11
FAM239A-201ENST00000381108 MARF1Q9Y4F3 1742 aaKnown RBP14.39□□□□□ -0.11
FAM239A-201ENST00000381108 HMOX1P09601 288 aa14.39□□□□□ -0.11
FAM239A-201ENST00000381108 LRRC7Q96NW7 1537 aa14.39□□□□□ -0.11
FAM239A-201ENST00000381108 PLEKHG5O94827 1062 aa14.39□□□□□ -0.11
FAM239A-201ENST00000381108 MAPK8IP3Q9UPT6 1336 aa14.38□□□□□ -0.11
FAM239A-201ENST00000381108 XIRP1Q702N8 1843 aaKnown RBP14.38□□□□□ -0.11
FAM239A-201ENST00000381108 MYT1Q01538 1121 aa14.38□□□□□ -0.11
FAM239A-201ENST00000381108 DMRT2Q9Y5R5 561 aa14.38□□□□□ -0.11
FAM239A-201ENST00000381108 IL13P35225 146 aa14.37□□□□□ -0.11
FAM239A-201ENST00000381108 PLEKHF1Q96S99 279 aa14.37□□□□□ -0.11
FAM239A-201ENST00000381108 MAP3K19Q56UN5 1328 aa14.37□□□□□ -0.11
FAM239A-201ENST00000381108 MST1RQ04912 1400 aa14.37□□□□□ -0.11
FAM239A-201ENST00000381108 ERICH6BQ5W0A0 696 aa14.37□□□□□ -0.11
FAM239A-201ENST00000381108 WWC1Q8IX03 1113 aa14.37□□□□□ -0.11
FAM239A-201ENST00000381108 SPINK5Q9NQ38 1064 aaPredicted RBP14.37□□□□□ -0.11
FAM239A-201ENST00000381108 MSH6P52701 1360 aa14.37□□□□□ -0.11
FAM239A-201ENST00000381108 HSP90AB2PQ58FF8 381 aa14.36□□□□□ -0.11
FAM239A-201ENST00000381108 LMOD2Q6P5Q4 547 aa14.36□□□□□ -0.11
FAM239A-201ENST00000381108 KIF1AQ12756 1690 aa14.36□□□□□ -0.11
FAM239A-201ENST00000381108 PRKAR2BP31323 418 aa14.36□□□□□ -0.11
FAM239A-201ENST00000381108 RCAN3Q9UKA8 241 aa14.36□□□□□ -0.11
FAM239A-201ENST00000381108 DCCP43146 1447 aa14.36□□□□□ -0.11
FAM239A-201ENST00000381108 EIF4A2Q14240 407 aaKnown RBP14.35□□□□□ -0.11
FAM239A-201ENST00000381108 DUSP27Q5VZP5 1158 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms