RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 FAM83GA6ND36 823 aa15.67■□□□□ 0.1
CDX2-201ENST00000381020 TEFQ10587 303 aa15.67■□□□□ 0.1
CDX2-201ENST00000381020 MVPQ14764 893 aaKnown RBP15.67■□□□□ 0.1
CDX2-201ENST00000381020 API5Q9BZZ5 524 aaKnown RBP15.67■□□□□ 0.1
CDX2-201ENST00000381020 TPRNQ4KMQ1 711 aa15.67■□□□□ 0.1
CDX2-201ENST00000381020 FKBP5Q13451 457 aaPredicted RBP15.67■□□□□ 0.1
CDX2-201ENST00000381020 PIK3C2GO75747 1445 aa15.66■□□□□ 0.1
CDX2-201ENST00000381020 TMEM57Q8N5G2 664 aa15.66■□□□□ 0.1
CDX2-201ENST00000381020 FOXD4L1Q9NU39 408 aa15.66■□□□□ 0.1
CDX2-201ENST00000381020 POLR3AO14802 1390 aaPredicted RBP15.66■□□□□ 0.1
CDX2-201ENST00000381020 POLKQ9UBT6 870 aa15.66■□□□□ 0.1
CDX2-201ENST00000381020 TRPM2O94759 1503 aa15.66■□□□□ 0.1
CDX2-201ENST00000381020 CLASP1Q7Z460 1538 aa15.66■□□□□ 0.1
CDX2-201ENST00000381020 YTHDC2Q9H6S0 1430 aaKnown RBP15.66■□□□□ 0.1
CDX2-201ENST00000381020 ACEP12821 1306 aa15.66■□□□□ 0.1
CDX2-201ENST00000381020 ANKLE2Q86XL3 938 aa15.65■□□□□ 0.1
CDX2-201ENST00000381020 ZNF330Q9Y3S2 320 aaPredicted RBP15.65■□□□□ 0.1
CDX2-201ENST00000381020 IGHDP01880 384 aa15.65■□□□□ 0.1
CDX2-201ENST00000381020 NEO1Q92859 1461 aa15.65■□□□□ 0.1
CDX2-201ENST00000381020 PLXNC1O60486 1568 aa15.65■□□□□ 0.1
CDX2-201ENST00000381020 PROSER2Q86WR7 435 aaPredicted RBP15.64■□□□□ 0.09
CDX2-201ENST00000381020 IQGAP3Q86VI3 1631 aa15.64■□□□□ 0.09
CDX2-201ENST00000381020 HSP90AB2PQ58FF8 381 aa15.63■□□□□ 0.09
CDX2-201ENST00000381020 MLH3Q9UHC1 1453 aa15.63■□□□□ 0.09
CDX2-201ENST00000381020 HMMRO75330 724 aa15.63■□□□□ 0.09
CDX2-201ENST00000381020 NSD2O96028 1365 aa15.63■□□□□ 0.09
CDX2-201ENST00000381020 TRIM27P14373 513 aa15.63■□□□□ 0.09
CDX2-201ENST00000381020 NCLP19338 710 aaKnown RBP15.63■□□□□ 0.09
CDX2-201ENST00000381020 ERVK-7P63135 1459 aa15.62■□□□□ 0.09
CDX2-201ENST00000381020 SLC4A2P04920 1241 aa15.62■□□□□ 0.09
CDX2-201ENST00000381020 PHACTR3Q96KR7 559 aa15.62■□□□□ 0.09
CDX2-201ENST00000381020 TRIM6-TRIM34B2RNG4 842 aa15.62■□□□□ 0.09
CDX2-201ENST00000381020 C1orf141Q5JVX7 400 aa15.62■□□□□ 0.09
CDX2-201ENST00000381020 AEBP1Q8IUX7 1158 aa15.62■□□□□ 0.09
CDX2-201ENST00000381020 RLBP1P12271 317 aa15.61■□□□□ 0.09
CDX2-201ENST00000381020 RNF123Q5XPI4 1314 aa15.61■□□□□ 0.09
CDX2-201ENST00000381020 ZNF428Q96B54 188 aa15.61■□□□□ 0.09
CDX2-201ENST00000381020 NPC1L1Q9UHC9 1359 aa15.61■□□□□ 0.09
CDX2-201ENST00000381020 USHBP1Q8N6Y0 703 aa15.61■□□□□ 0.09
CDX2-201ENST00000381020 PPIP5K1Q6PFW1 1433 aa15.6■□□□□ 0.09
CDX2-201ENST00000381020 UNC13BO14795 1591 aa15.6■□□□□ 0.09
CDX2-201ENST00000381020 FOXO3O43524 673 aa15.6■□□□□ 0.09
CDX2-201ENST00000381020 GZF1Q9H116 711 aaPredicted RBP15.6■□□□□ 0.09
CDX2-201ENST00000381020 EIF5BO60841 1220 aaKnown RBP15.59■□□□□ 0.09
CDX2-201ENST00000381020 PCDHB15Q9Y5E8 787 aa15.59■□□□□ 0.09
CDX2-201ENST00000381020 PUS7Q96PZ0 661 aaKnown RBP15.59■□□□□ 0.09
CDX2-201ENST00000381020 CT47B1P0C2W7 299 aaPredicted RBP15.59■□□□□ 0.09
CDX2-201ENST00000381020 NLRP2Q9NX02 1062 aa15.59■□□□□ 0.09
CDX2-201ENST00000381020 CLTCL1P53675 1640 aa15.58■□□□□ 0.09
CDX2-201ENST00000381020 NINLQ9Y2I6 1382 aa15.58■□□□□ 0.09
CDX2-201ENST00000381020 SHROOM2Q13796 1616 aa15.58■□□□□ 0.08
CDX2-201ENST00000381020 ATF3P18847 181 aa15.58■□□□□ 0.08
CDX2-201ENST00000381020 AAMPQ13685 434 aa15.58■□□□□ 0.08
CDX2-201ENST00000381020 GAS2L2Q8NHY3 880 aa15.58■□□□□ 0.08
CDX2-201ENST00000381020 TTC21BQ7Z4L5 1316 aa15.57■□□□□ 0.08
CDX2-201ENST00000381020 TRPM1Q7Z4N2 1603 aa15.56■□□□□ 0.08
CDX2-201ENST00000381020 KCNJ4P48050 445 aa15.56■□□□□ 0.08
CDX2-201ENST00000381020 NOL8Q76FK4 1167 aaKnown RBP15.56■□□□□ 0.08
CDX2-201ENST00000381020 BLMP54132 1417 aaPredicted RBP15.56■□□□□ 0.08
CDX2-201ENST00000381020 LTKP29376 864 aa15.56■□□□□ 0.08
CDX2-201ENST00000381020 RILPL2Q969X0 211 aa15.56■□□□□ 0.08
CDX2-201ENST00000381020 ZC3H6P61129 1189 aaKnown RBP15.55■□□□□ 0.08
CDX2-201ENST00000381020 MBIPQ9NS73 344 aa15.55■□□□□ 0.08
CDX2-201ENST00000381020 TSPOAP1O95153 1857 aa15.55■□□□□ 0.08
CDX2-201ENST00000381020 GOLGA6L22H0YM25 854 aa15.55■□□□□ 0.08
CDX2-201ENST00000381020 C22orf23Q9BZE7 217 aa15.55■□□□□ 0.08
CDX2-201ENST00000381020 SBNO2Q9Y2G9 1366 aa15.55■□□□□ 0.08
CDX2-201ENST00000381020 ARAP3Q8WWN8 1544 aa15.54■□□□□ 0.08
CDX2-201ENST00000381020 TSPYL6Q8N831 410 aa15.54■□□□□ 0.08
CDX2-201ENST00000381020 PHF8Q9UPP1 1060 aa15.54■□□□□ 0.08
CDX2-201ENST00000381020 TET3O43151 1660 aa15.54■□□□□ 0.08
CDX2-201ENST00000381020 AIMP1Q12904 312 aaKnown RBP15.53■□□□□ 0.08
CDX2-201ENST00000381020 EFCAB6Q5THR3 1501 aa15.53■□□□□ 0.08
CDX2-201ENST00000381020 KCNA6P17658 529 aa15.53■□□□□ 0.08
CDX2-201ENST00000381020 KRT24Q2M2I5 525 aa15.53■□□□□ 0.08
CDX2-201ENST00000381020 E9PCH4 1651 aa15.53■□□□□ 0.08
CDX2-201ENST00000381020 ABCC11Q96J66 1382 aa15.53■□□□□ 0.08
CDX2-201ENST00000381020 IFT57Q9NWB7 429 aa15.53■□□□□ 0.08
CDX2-201ENST00000381020 CCDC27Q2M243 656 aa15.53■□□□□ 0.08
CDX2-201ENST00000381020 RAPGEF4Q8WZA2 1011 aa15.53■□□□□ 0.08
CDX2-201ENST00000381020 ANP32BQ92688 251 aaKnown RBP15.53■□□□□ 0.08
CDX2-201ENST00000381020 CHMP3Q9Y3E7 222 aa15.53■□□□□ 0.08
CDX2-201ENST00000381020 EIF4A2Q14240 407 aaKnown RBP15.52■□□□□ 0.08
CDX2-201ENST00000381020 MYOM2P54296 1465 aa15.52■□□□□ 0.08
CDX2-201ENST00000381020 HECW2Q9P2P5 1572 aa15.52■□□□□ 0.08
CDX2-201ENST00000381020 F6X3S4 739 aa15.52■□□□□ 0.07
CDX2-201ENST00000381020 HDGFL1Q5TGJ6 251 aa15.52■□□□□ 0.07
CDX2-201ENST00000381020 ABCC3O15438 1527 aa15.52■□□□□ 0.07
CDX2-201ENST00000381020 ZNF530Q6P9A1 599 aaPredicted RBP15.51■□□□□ 0.07
CDX2-201ENST00000381020 C8orf58Q8NAV2 365 aa15.51■□□□□ 0.07
CDX2-201ENST00000381020 CFAP44Q96MT7 982 aa15.51■□□□□ 0.07
CDX2-201ENST00000381020 C9orf78Q9NZ63 289 aaPredicted RBP15.51■□□□□ 0.07
CDX2-201ENST00000381020 TRIM35Q9UPQ4 493 aa15.51■□□□□ 0.07
CDX2-201ENST00000381020 ZMYM4Q5VZL5 1548 aa15.51■□□□□ 0.07
CDX2-201ENST00000381020 METP08581 1390 aa15.5■□□□□ 0.07
CDX2-201ENST00000381020 CCDC9Q9Y3X0 531 aaKnown RBP15.5■□□□□ 0.07
CDX2-201ENST00000381020 ABCA9Q8IUA7 1624 aa15.5■□□□□ 0.07
CDX2-201ENST00000381020 RSPH6AQ9H0K4 717 aa15.5■□□□□ 0.07
CDX2-201ENST00000381020 USP35Q9P2H5 1018 aa15.5■□□□□ 0.07
CDX2-201ENST00000381020 CCDC30Q5VVM6 783 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms