RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 EVA1CP58658 441 aa20.43■□□□□ 0.86
SNAPC3-202ENST00000380821 ERC1Q8IUD2 1116 aa20.43■□□□□ 0.86
SNAPC3-202ENST00000380821 RBM10P98175 930 aaKnown RBP20.43■□□□□ 0.86
SNAPC3-202ENST00000380821 CT47A1Q5JQC4 288 aaPredicted RBP20.43■□□□□ 0.86
SNAPC3-202ENST00000380821 CIZ1Q9ULV3 898 aaPredicted RBP20.43■□□□□ 0.86
SNAPC3-202ENST00000380821 CLASRPQ8N2M8 674 aaKnown RBP20.42■□□□□ 0.86
SNAPC3-202ENST00000380821 WDR33Q9C0J8 1336 aaKnown RBP20.42■□□□□ 0.86
SNAPC3-202ENST00000380821 NEUROD6Q96NK8 337 aa20.42■□□□□ 0.86
SNAPC3-202ENST00000380821 RAD21O60216 631 aa20.42■□□□□ 0.86
SNAPC3-202ENST00000380821 CCDC43Q96MW1 224 aaKnown RBP20.41■□□□□ 0.86
SNAPC3-202ENST00000380821 RRP9O43818 475 aaKnown RBP20.4■□□□□ 0.86
SNAPC3-202ENST00000380821 OFD1O75665 1012 aa20.4■□□□□ 0.86
SNAPC3-202ENST00000380821 SART3Q15020 963 aaKnown RBP20.4■□□□□ 0.86
SNAPC3-202ENST00000380821 ANKRD1Q15327 319 aa20.4■□□□□ 0.86
SNAPC3-202ENST00000380821 BCL11BQ9C0K0 894 aaPredicted RBP20.4■□□□□ 0.86
SNAPC3-202ENST00000380821 UQCRHLA0A096LP55 91 aa20.4■□□□□ 0.86
SNAPC3-202ENST00000380821 UQCRHP07919 91 aa20.4■□□□□ 0.86
SNAPC3-202ENST00000380821 MAGEC2Q9UBF1 373 aaPredicted RBP20.4■□□□□ 0.86
SNAPC3-202ENST00000380821 CCDC112Q8NEF3 446 aa20.4■□□□□ 0.86
SNAPC3-202ENST00000380821 FIBPO43427 364 aa20.39■□□□□ 0.85
SNAPC3-202ENST00000380821 EXOSC9Q06265 439 aaKnown RBP20.39■□□□□ 0.85
SNAPC3-202ENST00000380821 DACH1Q9UI36 760 aa20.39■□□□□ 0.85
SNAPC3-202ENST00000380821 HSP90AB2PQ58FF8 381 aa20.39■□□□□ 0.85
SNAPC3-202ENST00000380821 GGNBP2Q9H3C7 697 aa20.39■□□□□ 0.85
SNAPC3-202ENST00000380821 NOB1Q9ULX3 412 aaKnown RBP20.38■□□□□ 0.85
SNAPC3-202ENST00000380821 MTHFSP49914 203 aa20.38■□□□□ 0.85
SNAPC3-202ENST00000380821 ODF2Q5BJF6 829 aa20.38■□□□□ 0.85
SNAPC3-202ENST00000380821 SPC24Q8NBT2 197 aa20.38■□□□□ 0.85
SNAPC3-202ENST00000380821 GNAI2P04899 355 aa20.38■□□□□ 0.85
SNAPC3-202ENST00000380821 TNMDQ9H2S6 317 aa20.37■□□□□ 0.85
SNAPC3-202ENST00000380821 SURF6O75683 361 aaKnown RBP20.37■□□□□ 0.85
SNAPC3-202ENST00000380821 JMYQ8N9B5 988 aa20.37■□□□□ 0.85
SNAPC3-202ENST00000380821 PRDM2Q13029 1718 aa20.37■□□□□ 0.85
SNAPC3-202ENST00000380821 STK38Q15208 465 aa20.37■□□□□ 0.85
SNAPC3-202ENST00000380821 TTLL5Q6EMB2 1281 aa20.37■□□□□ 0.85
SNAPC3-202ENST00000380821 IGF1RP08069 1367 aa20.36■□□□□ 0.85
SNAPC3-202ENST00000380821 GAS2L2Q8NHY3 880 aa20.36■□□□□ 0.85
SNAPC3-202ENST00000380821 CYP46A1Q9Y6A2 500 aa20.36■□□□□ 0.85
SNAPC3-202ENST00000380821 CBFA2T2O43439 604 aa20.36■□□□□ 0.85
SNAPC3-202ENST00000380821 WDR63Q8IWG1 891 aa20.36■□□□□ 0.85
SNAPC3-202ENST00000380821 TWISTNBQ3B726 338 aaPredicted RBP20.36■□□□□ 0.85
SNAPC3-202ENST00000380821 FGD5Q6ZNL6 1462 aa20.35■□□□□ 0.85
SNAPC3-202ENST00000380821 ERLIN1O75477 346 aa20.35■□□□□ 0.85
SNAPC3-202ENST00000380821 TXLNAP40222 546 aa20.35■□□□□ 0.85
SNAPC3-202ENST00000380821 ERICH3Q5RHP9 1530 aa20.35■□□□□ 0.85
SNAPC3-202ENST00000380821 PSME1Q06323 249 aa20.35■□□□□ 0.85
SNAPC3-202ENST00000380821 GAPVD1Q14C86 1478 aa20.35■□□□□ 0.85
SNAPC3-202ENST00000380821 CABP2Q9NPB3 220 aa20.35■□□□□ 0.85
SNAPC3-202ENST00000380821 TBC1D2BQ9UPU7 963 aa20.35■□□□□ 0.85
SNAPC3-202ENST00000380821 EIF3JO75822 258 aaKnown RBP20.34■□□□□ 0.85
SNAPC3-202ENST00000380821 AXDND1Q5T1B0 1012 aaPredicted RBP20.34■□□□□ 0.85
SNAPC3-202ENST00000380821 SERPINC1P01008 464 aa20.34■□□□□ 0.85
SNAPC3-202ENST00000380821 TXLNBQ8N3L3 684 aa20.34■□□□□ 0.85
SNAPC3-202ENST00000380821 MCM4P33991 863 aa20.33■□□□□ 0.85
SNAPC3-202ENST00000380821 MVPQ14764 893 aaKnown RBP20.33■□□□□ 0.85
SNAPC3-202ENST00000380821 CCT4P50991 539 aaKnown RBP20.33■□□□□ 0.85
SNAPC3-202ENST00000380821 KRT85P78386 507 aa20.33■□□□□ 0.84
SNAPC3-202ENST00000380821 AIMP1Q12904 312 aaKnown RBP20.32■□□□□ 0.84
SNAPC3-202ENST00000380821 ZNHIT6Q9NWK9 470 aaKnown RBP20.32■□□□□ 0.84
SNAPC3-202ENST00000380821 HFM1A2PYH4 1435 aa20.32■□□□□ 0.84
SNAPC3-202ENST00000380821 ESPNB1AK53 854 aa20.32■□□□□ 0.84
SNAPC3-202ENST00000380821 BCAR3O75815 825 aa20.32■□□□□ 0.84
SNAPC3-202ENST00000380821 RAPGEF4Q8WZA2 1011 aa20.32■□□□□ 0.84
SNAPC3-202ENST00000380821 TSPYL1Q9H0U9 437 aa20.32■□□□□ 0.84
SNAPC3-202ENST00000380821 DNAJC2Q99543 621 aaKnown RBP20.32■□□□□ 0.84
SNAPC3-202ENST00000380821 LRRCC1Q9C099 1032 aa20.32■□□□□ 0.84
SNAPC3-202ENST00000380821 SRCIN1Q9C0H9 1055 aa20.32■□□□□ 0.84
SNAPC3-202ENST00000380821 ERLIN2O94905 339 aa20.31■□□□□ 0.84
SNAPC3-202ENST00000380821 PPFIBP1Q86W92 1011 aa20.31■□□□□ 0.84
SNAPC3-202ENST00000380821 C1orf115Q9H7X2 142 aa20.31■□□□□ 0.84
SNAPC3-202ENST00000380821 PDIA4P13667 645 aaKnown RBP20.31■□□□□ 0.84
SNAPC3-202ENST00000380821 TAF3Q5VWG9 929 aa20.31■□□□□ 0.84
SNAPC3-202ENST00000380821 CHD1LQ86WJ1 897 aa20.31■□□□□ 0.84
SNAPC3-202ENST00000380821 FMNL2Q96PY5 1086 aa20.31■□□□□ 0.84
SNAPC3-202ENST00000380821 GOLGA6L10A6NI86 522 aa20.31■□□□□ 0.84
SNAPC3-202ENST00000380821 ZSCAN31Q96LW9 406 aaPredicted RBP20.3■□□□□ 0.84
SNAPC3-202ENST00000380821 KIAA0754O94854 1291 aa20.3■□□□□ 0.84
SNAPC3-202ENST00000380821 PRKAR2BP31323 418 aa20.3■□□□□ 0.84
SNAPC3-202ENST00000380821 PNISRQ8TF01 805 aaKnown RBP20.3■□□□□ 0.84
SNAPC3-202ENST00000380821 EHBP1L1Q8N3D4 1523 aa20.29■□□□□ 0.84
SNAPC3-202ENST00000380821 ZNF644Q9H582 1327 aaPredicted RBP20.29■□□□□ 0.84
SNAPC3-202ENST00000380821 CDK5RAP3Q96JB5 506 aa20.28■□□□□ 0.84
SNAPC3-202ENST00000380821 LUC7LQ9NQ29 371 aaKnown RBP20.28■□□□□ 0.84
SNAPC3-202ENST00000380821 KIAA1107Q9UPP5 1409 aa20.28■□□□□ 0.84
SNAPC3-202ENST00000380821 SLC3A2P08195 630 aaKnown RBP20.28■□□□□ 0.84
SNAPC3-202ENST00000380821 PDCL2Q8N4E4 241 aa20.28■□□□□ 0.84
SNAPC3-202ENST00000380821 IQCEQ6IPM2 695 aa20.27■□□□□ 0.84
SNAPC3-202ENST00000380821 RBM33Q96EV2 1170 aaKnown RBP20.27■□□□□ 0.84
SNAPC3-202ENST00000380821 ATF7IPQ6VMQ6 1270 aa20.27■□□□□ 0.84
SNAPC3-202ENST00000380821 ZSCAN30Q86W11 494 aa20.27■□□□□ 0.84
SNAPC3-202ENST00000380821 FYB1O15117 783 aa20.26■□□□□ 0.83
SNAPC3-202ENST00000380821 BRPF1P55201 1214 aaPredicted RBP20.26■□□□□ 0.83
SNAPC3-202ENST00000380821 CEBPZQ03701 1054 aaKnown RBP20.26■□□□□ 0.83
SNAPC3-202ENST00000380821 ERBINQ96RT1 1412 aa20.25■□□□□ 0.83
SNAPC3-202ENST00000380821 NUP62CLQ9H1M0 184 aa20.25■□□□□ 0.83
SNAPC3-202ENST00000380821 ME1P48163 572 aa20.25■□□□□ 0.83
SNAPC3-202ENST00000380821 STIM1Q13586 685 aa20.25■□□□□ 0.83
SNAPC3-202ENST00000380821 LARP1BQ659C4 914 aaKnown RBP20.25■□□□□ 0.83
SNAPC3-202ENST00000380821 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.25■□□□□ 0.833e-8■■□□□ 12.6
SNAPC3-202ENST00000380821 TTC39AQ5SRH9 613 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms