RNA–Protein interactions for RNA: ENST00000380610.8

HDAC7-203, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,261 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-203ENST00000380610 TRAK1Q9UPV9 953 aa16.11■□□□□ 0.17
HDAC7-203ENST00000380610 GDPD2Q9HCC8 539 aa16.11■□□□□ 0.17
HDAC7-203ENST00000380610 FAM135AQ9P2D6 1515 aa16.11■□□□□ 0.17
HDAC7-203ENST00000380610 TRPM1Q7Z4N2 1603 aa16.11■□□□□ 0.17
HDAC7-203ENST00000380610 ZSCAN20P17040 1043 aaPredicted RBP16.11■□□□□ 0.17
HDAC7-203ENST00000380610 TTC12Q9H892 705 aaPredicted RBP16.11■□□□□ 0.17
HDAC7-203ENST00000380610 ZBTB40Q9NUA8 1239 aa16.11■□□□□ 0.17
HDAC7-203ENST00000380610 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.1■□□□□ 0.17
HDAC7-203ENST00000380610 CEP170Q5SW79 1584 aa16.1■□□□□ 0.17
HDAC7-203ENST00000380610 NUCB2P80303 420 aa16.1■□□□□ 0.17
HDAC7-203ENST00000380610 KIAA2012Q0VF49 1180 aa16.1■□□□□ 0.17
HDAC7-203ENST00000380610 SAFB2Q14151 953 aaKnown RBP eCLIP16.1■□□□□ 0.17
HDAC7-203ENST00000380610 MTERF4Q7Z6M4 381 aaKnown RBP16.1■□□□□ 0.17
HDAC7-203ENST00000380610 VIRMAQ69YN4 1812 aaKnown RBP16.09■□□□□ 0.17
HDAC7-203ENST00000380610 BMP2KLQ5H9B9 411 aa16.09■□□□□ 0.17
HDAC7-203ENST00000380610 NCOA3Q9Y6Q9 1424 aa16.09■□□□□ 0.17
HDAC7-203ENST00000380610 SYNJ2O15056 1496 aa16.09■□□□□ 0.17
HDAC7-203ENST00000380610 DMTNQ08495 405 aa16.08■□□□□ 0.17
HDAC7-203ENST00000380610 MAGI1Q96QZ7 1491 aaPredicted RBP16.08■□□□□ 0.17
HDAC7-203ENST00000380610 ATP2B3Q16720 1220 aa16.08■□□□□ 0.16
HDAC7-203ENST00000380610 C16orf71Q8IYS4 520 aaPredicted RBP16.08■□□□□ 0.16
HDAC7-203ENST00000380610 PDLIM2Q96JY6 352 aa16.07■□□□□ 0.16
HDAC7-203ENST00000380610 HS1BP3Q53T59 392 aa16.07■□□□□ 0.16
HDAC7-203ENST00000380610 KIAA0556O60303 1618 aa16.07■□□□□ 0.16
HDAC7-203ENST00000380610 VGLL3A8MV65 326 aa16.06■□□□□ 0.16
HDAC7-203ENST00000380610 IPO8O15397 1037 aaKnown RBP16.06■□□□□ 0.16
HDAC7-203ENST00000380610 LRSAM1Q6UWE0 723 aa16.06■□□□□ 0.16
HDAC7-203ENST00000380610 USP25Q9UHP3 1055 aa16.06■□□□□ 0.16
HDAC7-203ENST00000380610 PRDM15P57071 1507 aaPredicted RBP16.06■□□□□ 0.16
HDAC7-203ENST00000380610 ZBTB22O15209 634 aa16.04■□□□□ 0.16
HDAC7-203ENST00000380610 CDC45O75419 566 aa16.04■□□□□ 0.16
HDAC7-203ENST00000380610 PDE4CQ08493 712 aa16.04■□□□□ 0.16
HDAC7-203ENST00000380610 ZNF710Q8N1W2 664 aa16.04■□□□□ 0.16
HDAC7-203ENST00000380610 THUMPD2Q9BTF0 503 aaKnown RBP16.04■□□□□ 0.16
HDAC7-203ENST00000380610 CGNQ9P2M7 1197 aaKnown RBP16.03■□□□□ 0.16
HDAC7-203ENST00000380610 DTNBO60941 627 aa16.03■□□□□ 0.16
HDAC7-203ENST00000380610 TMEM132EQ6IEE7 984 aa16.03■□□□□ 0.16
HDAC7-203ENST00000380610 ABCC2Q92887 1545 aa16.03■□□□□ 0.16
HDAC7-203ENST00000380610 ZMYM3Q14202 1370 aa16.02■□□□□ 0.16
HDAC7-203ENST00000380610 ATAD2Q6PL18 1390 aa16.02■□□□□ 0.16
HDAC7-203ENST00000380610 U2AF2P26368 475 aaKnown RBP eCLIP16.02■□□□□ 0.16
HDAC7-203ENST00000380610 RABEP1Q15276 862 aa16.02■□□□□ 0.16
HDAC7-203ENST00000380610 NSD3Q9BZ95 1437 aa16.02■□□□□ 0.16
HDAC7-203ENST00000380610 NOLC1Q14978 699 aaKnown RBP eCLIP16.02■□□□□ 0.16
HDAC7-203ENST00000380610 NUTM2DQ5VT03 806 aaPredicted RBP16.02■□□□□ 0.16
HDAC7-203ENST00000380610 ZNF771Q7L3S4 317 aaPredicted RBP16.02■□□□□ 0.16
HDAC7-203ENST00000380610 MYRIPQ8NFW9 859 aa16.02■□□□□ 0.16
HDAC7-203ENST00000380610 KIF3AQ9Y496 699 aa16.02■□□□□ 0.16
HDAC7-203ENST00000380610 ADGBQ8N7X0 1667 aa16.02■□□□□ 0.15
HDAC7-203ENST00000380610 TMPOP42166 694 aaKnown RBP16.02■□□□□ 0.15
HDAC7-203ENST00000380610 OTUD7AQ8TE49 926 aaPredicted RBP16.02■□□□□ 0.15
HDAC7-203ENST00000380610 ZDHHC9Q9Y397 364 aa16.02■□□□□ 0.15
HDAC7-203ENST00000380610 PTPRGP23470 1445 aa16.01■□□□□ 0.15
HDAC7-203ENST00000380610 TSPY26PQ9H489 355 aa16.01■□□□□ 0.15
HDAC7-203ENST00000380610 ST18O60284 1047 aa16.01■□□□□ 0.15
HDAC7-203ENST00000380610 POLR3AO14802 1390 aaPredicted RBP16.01■□□□□ 0.15
HDAC7-203ENST00000380610 GSPT1P15170 499 aaKnown RBP16■□□□□ 0.15
HDAC7-203ENST00000380610 NEK4P51957 841 aa16■□□□□ 0.15
HDAC7-203ENST00000380610 SPC24Q8NBT2 197 aa16■□□□□ 0.15
HDAC7-203ENST00000380610 CHMP4BQ9H444 224 aaKnown RBP16■□□□□ 0.15
HDAC7-203ENST00000380610 RAPGEF6Q8TEU7 1601 aa16■□□□□ 0.15
HDAC7-203ENST00000380610 SMARCA5O60264 1052 aaPredicted RBP16■□□□□ 0.15
HDAC7-203ENST00000380610 PDCL2Q8N4E4 241 aa16■□□□□ 0.15
HDAC7-203ENST00000380610 GGNBP2Q9H3C7 697 aa16■□□□□ 0.15
HDAC7-203ENST00000380610 ADGRF5Q8IZF2 1346 aa15.99■□□□□ 0.15
HDAC7-203ENST00000380610 CLASP1Q7Z460 1538 aa15.99■□□□□ 0.15
HDAC7-203ENST00000380610 MCM5P33992 734 aa15.99■□□□□ 0.15
HDAC7-203ENST00000380610 PLCD3Q8N3E9 789 aa15.99■□□□□ 0.15
HDAC7-203ENST00000380610 PHF23Q9BUL5 403 aaPredicted RBP15.99■□□□□ 0.15
HDAC7-203ENST00000380610 IBTKQ9P2D0 1353 aaPredicted RBP15.98■□□□□ 0.15
HDAC7-203ENST00000380610 BCL2L12Q9HB09 334 aa15.98■□□□□ 0.15
HDAC7-203ENST00000380610 SCAF11Q99590 1463 aaKnown RBP15.98■□□□□ 0.15
HDAC7-203ENST00000380610 GADD45BO75293 160 aaPredicted RBP15.98■□□□□ 0.15
HDAC7-203ENST00000380610 TRIM35Q9UPQ4 493 aa15.98■□□□□ 0.15
HDAC7-203ENST00000380610 NUP160Q12769 1436 aa15.97■□□□□ 0.15
HDAC7-203ENST00000380610 FBLN1P23142 703 aa15.97■□□□□ 0.15
HDAC7-203ENST00000380610 SIRT2Q8IXJ6 389 aa15.97■□□□□ 0.15
HDAC7-203ENST00000380610 ADCY10Q96PN6 1610 aa15.97■□□□□ 0.15
HDAC7-203ENST00000380610 ADCY5O95622 1261 aa15.97■□□□□ 0.15
HDAC7-203ENST00000380610 HCLS1P14317 486 aaPredicted RBP15.96■□□□□ 0.15
HDAC7-203ENST00000380610 USP26Q9BXU7 913 aa15.96■□□□□ 0.15
HDAC7-203ENST00000380610 CARMIL2Q6F5E8 1435 aa15.96■□□□□ 0.15
HDAC7-203ENST00000380610 UTP14CQ5TAP6 766 aaKnown RBP15.96■□□□□ 0.15
HDAC7-203ENST00000380610 GCC1Q96CN9 775 aa15.96■□□□□ 0.15
HDAC7-203ENST00000380610 NPC1L1Q9UHC9 1359 aa15.96■□□□□ 0.14
HDAC7-203ENST00000380610 CCDC141Q6ZP82 1450 aa15.95■□□□□ 0.14
HDAC7-203ENST00000380610 ZBTB7BO15156 539 aaPredicted RBP15.95■□□□□ 0.14
HDAC7-203ENST00000380610 CLEC17AQ6ZS10 378 aa15.95■□□□□ 0.14
HDAC7-203ENST00000380610 GTF2E1P29083 439 aaPredicted RBP15.95■□□□□ 0.14
HDAC7-203ENST00000380610 HMGN5P82970 282 aaKnown RBP15.95■□□□□ 0.14
HDAC7-203ENST00000380610 CCDC27Q2M243 656 aa15.95■□□□□ 0.14
HDAC7-203ENST00000380610 TSPYL6Q8N831 410 aa15.95■□□□□ 0.14
HDAC7-203ENST00000380610 TSHZ3Q63HK5 1081 aa15.94■□□□□ 0.14
HDAC7-203ENST00000380610 CYP2E1P05181 493 aaPredicted RBP15.94■□□□□ 0.14
HDAC7-203ENST00000380610 PLEKHM2Q8IWE5 1019 aa15.94■□□□□ 0.14
HDAC7-203ENST00000380610 LARP6Q9BRS8 491 aaKnown RBP15.94■□□□□ 0.14
HDAC7-203ENST00000380610 CHMP3Q9Y3E7 222 aa15.94■□□□□ 0.14
HDAC7-203ENST00000380610 CWC22Q9HCG8 908 aaKnown RBP15.93■□□□□ 0.14
HDAC7-203ENST00000380610 CDK11BP21127 795 aaKnown RBP15.93■□□□□ 0.14
HDAC7-203ENST00000380610 CHAF1AQ13111 956 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms