RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 EVC2Q86UK5 1308 aa14.81□□□□□ -0.04
CHD3-203ENST00000380358 ERLIN2O94905 339 aa14.81□□□□□ -0.04
CHD3-203ENST00000380358 SERPINC1P01008 464 aa14.81□□□□□ -0.04
CHD3-203ENST00000380358 TNNT1P13805 278 aa14.81□□□□□ -0.04
CHD3-203ENST00000380358 GBP2P32456 591 aaPredicted RBP14.81□□□□□ -0.04
CHD3-203ENST00000380358 INTS3Q68E01 1043 aaKnown RBP14.81□□□□□ -0.04
CHD3-203ENST00000380358 SMARCE1Q969G3 411 aa14.81□□□□□ -0.04
CHD3-203ENST00000380358 FKBP4Q02790 459 aaKnown RBP eCLIP14.81□□□□□ -0.04
CHD3-203ENST00000380358 ANKRD18AQ8IVF6 992 aa14.81□□□□□ -0.04
CHD3-203ENST00000380358 NF2P35240 595 aa14.81□□□□□ -0.04
CHD3-203ENST00000380358 CCDC113Q9H0I3 377 aa14.81□□□□□ -0.04
CHD3-203ENST00000380358 GOLGA6L10A0A0M3HER8 536 aa14.81□□□□□ -0.04
CHD3-203ENST00000380358 GOLGA6L10A6NI86 522 aa14.81□□□□□ -0.04
CHD3-203ENST00000380358 CCER2I3L3R5 266 aa14.81□□□□□ -0.04
CHD3-203ENST00000380358 ANAPC15P60006 121 aa14.8□□□□□ -0.04
CHD3-203ENST00000380358 ABTB2Q8N961 1025 aa14.8□□□□□ -0.04
CHD3-203ENST00000380358 CHMP5Q9NZZ3 219 aa14.8□□□□□ -0.04
CHD3-203ENST00000380358 L3MBTL2Q969R5 705 aa14.8□□□□□ -0.04
CHD3-203ENST00000380358 DNA2P51530 1060 aa14.8□□□□□ -0.04
CHD3-203ENST00000380358 CCDC112Q8NEF3 446 aa14.8□□□□□ -0.04
CHD3-203ENST00000380358 ARHGAP35Q9NRY4 1499 aa14.8□□□□□ -0.04
CHD3-203ENST00000380358 EEA1Q15075 1411 aa14.8□□□□□ -0.04
CHD3-203ENST00000380358 SURF6O75683 361 aaKnown RBP14.8□□□□□ -0.04
CHD3-203ENST00000380358 SLC4A8Q2Y0W8 1093 aa14.8□□□□□ -0.04
CHD3-203ENST00000380358 CENPQQ7L2Z9 268 aaPredicted RBP14.8□□□□□ -0.04
CHD3-203ENST00000380358 NLRP6P59044 892 aa14.79□□□□□ -0.04
CHD3-203ENST00000380358 GGNBP2Q9H3C7 697 aa14.79□□□□□ -0.04
CHD3-203ENST00000380358 FIBPO43427 364 aa14.79□□□□□ -0.04
CHD3-203ENST00000380358 SETD5Q9C0A6 1442 aa14.79□□□□□ -0.04
CHD3-203ENST00000380358 NLRP13Q86W25 1043 aa14.78□□□□□ -0.04
CHD3-203ENST00000380358 CNTROBQ8N137 903 aa14.78□□□□□ -0.04
CHD3-203ENST00000380358 CCDC69A6NI79 296 aa14.78□□□□□ -0.04
CHD3-203ENST00000380358 XPCQ01831 940 aaPredicted RBP14.78□□□□□ -0.04
CHD3-203ENST00000380358 DZIP1LQ8IYY4 767 aaKnown RBP14.78□□□□□ -0.04
CHD3-203ENST00000380358 CABP2Q9NPB3 220 aa14.78□□□□□ -0.04
CHD3-203ENST00000380358 KANK4Q5T7N3 995 aaPredicted RBP14.78□□□□□ -0.04
CHD3-203ENST00000380358 SOGA3Q5TF21 947 aa14.78□□□□□ -0.04
CHD3-203ENST00000380358 PANK1Q8TE04 598 aa14.78□□□□□ -0.04
CHD3-203ENST00000380358 KINO60870 393 aaKnown RBP14.78□□□□□ -0.04
CHD3-203ENST00000380358 CAVIN1Q6NZI2 390 aaKnown RBP14.78□□□□□ -0.04
CHD3-203ENST00000380358 TOM1L2Q6ZVM7 507 aa14.78□□□□□ -0.04
CHD3-203ENST00000380358 WRNQ14191 1432 aaPredicted RBP eCLIP14.77□□□□□ -0.04
CHD3-203ENST00000380358 EZRP15311 586 aaKnown RBP14.77□□□□□ -0.04
CHD3-203ENST00000380358 STK38Q15208 465 aa14.77□□□□□ -0.05
CHD3-203ENST00000380358 UBA5Q9GZZ9 404 aa14.77□□□□□ -0.05
CHD3-203ENST00000380358 ZNHIT6Q9NWK9 470 aaKnown RBP14.77□□□□□ -0.05
CHD3-203ENST00000380358 ERC1Q8IUD2 1116 aa14.76□□□□□ -0.05
CHD3-203ENST00000380358 DRC1Q96MC2 740 aa14.76□□□□□ -0.05
CHD3-203ENST00000380358 TSHZ2Q9NRE2 1034 aa14.76□□□□□ -0.05
CHD3-203ENST00000380358 MYO15BQ96JP2 1530 aa14.76□□□□□ -0.05
CHD3-203ENST00000380358 TMX1Q9H3N1 280 aa14.76□□□□□ -0.05
CHD3-203ENST00000380358 MACROD2A1Z1Q3 448 aa14.76□□□□□ -0.05
CHD3-203ENST00000380358 ANKRD30AQ9BXX3 1397 aa14.76□□□□□ -0.05
CHD3-203ENST00000380358 CUX2O14529 1486 aa14.76□□□□□ -0.05
CHD3-203ENST00000380358 MPHOSPH8Q99549 860 aa14.75□□□□□ -0.05
CHD3-203ENST00000380358 DDX19BQ9UMR2 479 aa14.75□□□□□ -0.05
CHD3-203ENST00000380358 CCDC158Q5M9N0 1113 aa14.75□□□□□ -0.05
CHD3-203ENST00000380358 RSPH6AQ9H0K4 717 aa14.75□□□□□ -0.05
CHD3-203ENST00000380358 FAM43AQ8N2R8 423 aa14.75□□□□□ -0.05
CHD3-203ENST00000380358 LEKR1Q6ZMV7 388 aa14.75□□□□□ -0.05
CHD3-203ENST00000380358 CTNNBL1Q8WYA6 563 aaPredicted RBP14.75□□□□□ -0.05
CHD3-203ENST00000380358 WASHC2AQ641Q2 1341 aa14.74□□□□□ -0.05
CHD3-203ENST00000380358 ERCC4Q92889 916 aaPredicted RBP14.74□□□□□ -0.05
CHD3-203ENST00000380358 CABP4P57796 275 aa14.74□□□□□ -0.05
CHD3-203ENST00000380358 UBE4AQ14139 1066 aa14.74□□□□□ -0.05
CHD3-203ENST00000380358 NINLQ9Y2I6 1382 aa14.74□□□□□ -0.05
CHD3-203ENST00000380358 GNL3LQ9NVN8 582 aaKnown RBP14.74□□□□□ -0.05
CHD3-203ENST00000380358 RAI14Q9P0K7 980 aa14.74□□□□□ -0.05
CHD3-203ENST00000380358 CARMIL1Q5VZK9 1371 aa14.74□□□□□ -0.05
CHD3-203ENST00000380358 PRPF40AO75400 957 aaKnown RBP14.73□□□□□ -0.05
CHD3-203ENST00000380358 PPFIBP1Q86W92 1011 aa14.73□□□□□ -0.05
CHD3-203ENST00000380358 GOPCQ9HD26 462 aa14.73□□□□□ -0.05
CHD3-203ENST00000380358 PSMA5P28066 241 aa14.73□□□□□ -0.05
CHD3-203ENST00000380358 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.73□□□□□ -0.05
CHD3-203ENST00000380358 CARMIL2Q6F5E8 1435 aa14.72□□□□□ -0.05
CHD3-203ENST00000380358 ME1P48163 572 aa14.72□□□□□ -0.05
CHD3-203ENST00000380358 TMEM132EQ6IEE7 984 aa14.72□□□□□ -0.05
CHD3-203ENST00000380358 TDO2P48775 406 aa14.72□□□□□ -0.05
CHD3-203ENST00000380358 RRP1P56182 461 aaKnown RBP14.72□□□□□ -0.05
CHD3-203ENST00000380358 VTI1AQ96AJ9 217 aa14.72□□□□□ -0.05
CHD3-203ENST00000380358 API5Q9BZZ5 524 aaKnown RBP14.72□□□□□ -0.05
CHD3-203ENST00000380358 RBM25P49756 843 aaKnown RBP14.72□□□□□ -0.05
CHD3-203ENST00000380358 DESP17661 470 aa14.72□□□□□ -0.05
CHD3-203ENST00000380358 ABCF2Q9UG63 623 aa14.72□□□□□ -0.05
CHD3-203ENST00000380358 ZNF354CQ86Y25 554 aa14.71□□□□□ -0.05
CHD3-203ENST00000380358 KIAA0754O94854 1291 aa14.71□□□□□ -0.05
CHD3-203ENST00000380358 PDE3BQ13370 1112 aa14.71□□□□□ -0.05
CHD3-203ENST00000380358 VGFO15240 615 aaPredicted RBP14.71□□□□□ -0.05
CHD3-203ENST00000380358 NASPP49321 788 aaPredicted RBP14.71□□□□□ -0.05
CHD3-203ENST00000380358 NEK4P51957 841 aa14.71□□□□□ -0.05
CHD3-203ENST00000380358 GRIPAP1Q4V328 841 aa14.71□□□□□ -0.05
CHD3-203ENST00000380358 C22orf23Q9BZE7 217 aa14.71□□□□□ -0.05
CHD3-203ENST00000380358 BCCIPQ9P287 314 aaKnown RBP eCLIP14.71□□□□□ -0.05
CHD3-203ENST00000380358 ERICH4A6NGS2 130 aa14.71□□□□□ -0.06
CHD3-203ENST00000380358 FAM69CQ0P6D2 419 aa14.71□□□□□ -0.06
CHD3-203ENST00000380358 CBX1P83916 185 aa14.7□□□□□ -0.06
CHD3-203ENST00000380358 CWC15Q9P013 229 aaKnown RBP14.7□□□□□ -0.06
CHD3-203ENST00000380358 PROSER2Q86WR7 435 aaPredicted RBP14.7□□□□□ -0.06
CHD3-203ENST00000380358 MYBBP1AQ9BQG0 1328 aaKnown RBP14.7□□□□□ -0.06
CHD3-203ENST00000380358 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms