RNA–Protein interactions for RNA: ENST00000380241.7

CTPS2-202, Transcript of CTP synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS2, Length 3,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2-202ENST00000380241 RBM27Q9P2N5 1060 aaKnown RBP11.59□□□□□ -0.55
CTPS2-202ENST00000380241 SYCE3A1L190 88 aa11.58□□□□□ -0.56
CTPS2-202ENST00000380241 DIAPH3Q9NSV4 1193 aa11.58□□□□□ -0.56
CTPS2-202ENST00000380241 GABPB1Q06547 395 aaPredicted RBP11.58□□□□□ -0.56
CTPS2-202ENST00000380241 ZBTB22O15209 634 aa11.57□□□□□ -0.56
CTPS2-202ENST00000380241 KCNJ4P48050 445 aa11.57□□□□□ -0.56
CTPS2-202ENST00000380241 CFDP1Q9UEE9 299 aaPredicted RBP11.57□□□□□ -0.56
CTPS2-202ENST00000380241 FAM177BA6PVY3 158 aa11.57□□□□□ -0.56
CTPS2-202ENST00000380241 DNAJC2Q99543 621 aaKnown RBP11.57□□□□□ -0.56
CTPS2-202ENST00000380241 KIF2CQ99661 725 aa11.57□□□□□ -0.56
CTPS2-202ENST00000380241 CEP170Q5SW79 1584 aa11.57□□□□□ -0.56
CTPS2-202ENST00000380241 U2AF2P26368 475 aaKnown RBP eCLIP11.57□□□□□ -0.565e-7■□□□□ 8.9
CTPS2-202ENST00000380241 RGL3Q3MIN7 710 aa11.57□□□□□ -0.56
CTPS2-202ENST00000380241 ZKSCAN2Q63HK3 967 aa11.57□□□□□ -0.56
CTPS2-202ENST00000380241 DZIP1LQ8IYY4 767 aaKnown RBP11.57□□□□□ -0.56
CTPS2-202ENST00000380241 OGFRQ9NZT2 677 aa11.57□□□□□ -0.56
CTPS2-202ENST00000380241 CDCA8Q53HL2 280 aa11.56□□□□□ -0.56
CTPS2-202ENST00000380241 TRPM1Q7Z4N2 1603 aa11.56□□□□□ -0.56
CTPS2-202ENST00000380241 ADGRL2O95490 1459 aa11.56□□□□□ -0.56
CTPS2-202ENST00000380241 MBD3O95983 291 aa11.56□□□□□ -0.56
CTPS2-202ENST00000380241 IRX5P78411 483 aaPredicted RBP11.56□□□□□ -0.56
CTPS2-202ENST00000380241 ZNF526Q8TF50 670 aaPredicted RBP11.56□□□□□ -0.56
CTPS2-202ENST00000380241 TSPY26PQ9H489 355 aa11.56□□□□□ -0.56
CTPS2-202ENST00000380241 GPT2Q8TD30 523 aa11.55□□□□□ -0.56
CTPS2-202ENST00000380241 MAGI2Q86UL8 1455 aa11.55□□□□□ -0.56
CTPS2-202ENST00000380241 NEUROD2Q15784 382 aa11.55□□□□□ -0.56
CTPS2-202ENST00000380241 RBM42Q9BTD8 480 aaKnown RBP11.55□□□□□ -0.56
CTPS2-202ENST00000380241 ZNF777Q9ULD5 760 aaPredicted RBP11.55□□□□□ -0.56
CTPS2-202ENST00000380241 TMEM63CQ9P1W3 806 aa11.55□□□□□ -0.56
CTPS2-202ENST00000380241 ADGBQ8N7X0 1667 aa11.54□□□□□ -0.56
CTPS2-202ENST00000380241 KDM5DQ9BY66 1539 aa11.54□□□□□ -0.56
CTPS2-202ENST00000380241 MAPK8IP2Q13387 824 aaPredicted RBP11.54□□□□□ -0.56
CTPS2-202ENST00000380241 FKBP5Q13451 457 aaPredicted RBP11.54□□□□□ -0.56
CTPS2-202ENST00000380241 BMP2KLQ5H9B9 411 aa11.54□□□□□ -0.56
CTPS2-202ENST00000380241 CWC22Q9HCG8 908 aaKnown RBP11.54□□□□□ -0.56
CTPS2-202ENST00000380241 DDX19BQ9UMR2 479 aa11.54□□□□□ -0.56
CTPS2-202ENST00000380241 ASXL1Q8IXJ9 1541 aa11.54□□□□□ -0.56
CTPS2-202ENST00000380241 VGFO15240 615 aaPredicted RBP11.54□□□□□ -0.56
CTPS2-202ENST00000380241 SLC20A2Q08357 652 aa11.54□□□□□ -0.56
CTPS2-202ENST00000380241 TIGD1Q96MW7 591 aa11.54□□□□□ -0.56
CTPS2-202ENST00000380241 PRDM15P57071 1507 aaPredicted RBP11.54□□□□□ -0.56
CTPS2-202ENST00000380241 ANKRD7Q92527 254 aa11.53□□□□□ -0.56
CTPS2-202ENST00000380241 SYAP1Q96A49 352 aaPredicted RBP11.53□□□□□ -0.56
CTPS2-202ENST00000380241 KCNG1Q9UIX4 513 aa11.53□□□□□ -0.56
CTPS2-202ENST00000380241 RABEP1Q15276 862 aa11.53□□□□□ -0.56
CTPS2-202ENST00000380241 WDR7Q9Y4E6 1490 aa11.53□□□□□ -0.56
CTPS2-202ENST00000380241 CYP2E1P05181 493 aaPredicted RBP11.53□□□□□ -0.56
CTPS2-202ENST00000380241 ZNF592Q92610 1267 aa11.53□□□□□ -0.56
CTPS2-202ENST00000380241 LNPKQ9C0E8 428 aa11.53□□□□□ -0.56
CTPS2-202ENST00000380241 NPC1L1Q9UHC9 1359 aa11.52□□□□□ -0.56
CTPS2-202ENST00000380241 TMED8Q6PL24 325 aaPredicted RBP11.52□□□□□ -0.56
CTPS2-202ENST00000380241 ITPRIPQ8IWB1 547 aa11.52□□□□□ -0.56
CTPS2-202ENST00000380241 SPTLC3Q9NUV7 552 aa11.52□□□□□ -0.56
CTPS2-202ENST00000380241 EIF4G3O43432 1585 aaKnown RBP11.52□□□□□ -0.56
CTPS2-202ENST00000380241 IRX3P78415 501 aaPredicted RBP11.52□□□□□ -0.57
CTPS2-202ENST00000380241 WDR63Q8IWG1 891 aa11.52□□□□□ -0.57
CTPS2-202ENST00000380241 PHF14O94880 888 aa11.51□□□□□ -0.57
CTPS2-202ENST00000380241 NUCB1Q02818 461 aa11.51□□□□□ -0.57
CTPS2-202ENST00000380241 MPNDQ8N594 471 aa11.51□□□□□ -0.57
CTPS2-202ENST00000380241 TMEM132AQ24JP5 1023 aa11.51□□□□□ -0.57
CTPS2-202ENST00000380241 FAM184AQ8NB25 1140 aa11.51□□□□□ -0.57
CTPS2-202ENST00000380241 LAMC1P11047 1609 aa11.51□□□□□ -0.57
CTPS2-202ENST00000380241 RIOK3O14730 519 aaKnown RBP11.51□□□□□ -0.57
CTPS2-202ENST00000380241 UVSSAQ2YD98 709 aa11.51□□□□□ -0.57
CTPS2-202ENST00000380241 TTC12Q9H892 705 aaPredicted RBP11.51□□□□□ -0.57
CTPS2-202ENST00000380241 CHD1LQ86WJ1 897 aa11.5□□□□□ -0.57
CTPS2-202ENST00000380241 TEX2Q8IWB9 1127 aa11.5□□□□□ -0.57
CTPS2-202ENST00000380241 CALCOCO1Q9P1Z2 691 aa11.5□□□□□ -0.57
CTPS2-202ENST00000380241 RRP7AQ9Y3A4 280 aaKnown RBP11.5□□□□□ -0.57
CTPS2-202ENST00000380241 TBC1D9Q6ZT07 1266 aa11.5□□□□□ -0.57
CTPS2-202ENST00000380241 C17orf53Q8N3J3 647 aaPredicted RBP11.5□□□□□ -0.57
CTPS2-202ENST00000380241 GRIN2AQ12879 1464 aa11.5□□□□□ -0.57
CTPS2-202ENST00000380241 TSPYL1Q9H0U9 437 aa11.49□□□□□ -0.57
CTPS2-202ENST00000380241 RUNDC1Q96C34 613 aa11.49□□□□□ -0.57
CTPS2-202ENST00000380241 SMC4Q9NTJ3 1288 aa11.49□□□□□ -0.57
CTPS2-202ENST00000380241 SLFN14P0C7P3 912 aa11.48□□□□□ -0.57
CTPS2-202ENST00000380241 PKP1Q13835 747 aa11.48□□□□□ -0.57
CTPS2-202ENST00000380241 CTIFO43310 598 aaKnown RBP11.48□□□□□ -0.57
CTPS2-202ENST00000380241 SHROOM2Q13796 1616 aa11.47□□□□□ -0.57
CTPS2-202ENST00000380241 TCP11L2Q8N4U5 519 aa11.47□□□□□ -0.57
CTPS2-202ENST00000380241 USP25Q9UHP3 1055 aa11.47□□□□□ -0.57
CTPS2-202ENST00000380241 CDC45O75419 566 aa11.47□□□□□ -0.57
CTPS2-202ENST00000380241 ABCC10Q5T3U5 1492 aa11.47□□□□□ -0.57
CTPS2-202ENST00000380241 NUP160Q12769 1436 aa11.47□□□□□ -0.57
CTPS2-202ENST00000380241 ST18O60284 1047 aa11.47□□□□□ -0.57
CTPS2-202ENST00000380241 ADCY5O95622 1261 aa11.47□□□□□ -0.57
CTPS2-202ENST00000380241 CT47B1P0C2W7 299 aaPredicted RBP11.47□□□□□ -0.57
CTPS2-202ENST00000380241 NSFL1CQ9UNZ2 370 aaKnown RBP11.47□□□□□ -0.57
CTPS2-202ENST00000380241 ITSN2Q9NZM3 1697 aa11.46□□□□□ -0.57
CTPS2-202ENST00000380241 AK9Q5TCS8 1911 aa11.46□□□□□ -0.57
CTPS2-202ENST00000380241 EIF2AK4Q9P2K8 1649 aaKnown RBP11.46□□□□□ -0.57
CTPS2-202ENST00000380241 TPM3P06753 285 aa11.46□□□□□ -0.57
CTPS2-202ENST00000380241 CTNNA3Q9UI47 895 aa11.46□□□□□ -0.57
CTPS2-202ENST00000380241 TSPY4P0CV99 314 aa11.46□□□□□ -0.58
CTPS2-202ENST00000380241 TSPY10P0CW01 314 aa11.46□□□□□ -0.58
CTPS2-202ENST00000380241 TRIM27P14373 513 aa11.46□□□□□ -0.58
CTPS2-202ENST00000380241 SYCP1Q15431 976 aa11.46□□□□□ -0.58
CTPS2-202ENST00000380241 TERF2Q15554 542 aa11.46□□□□□ -0.58
CTPS2-202ENST00000380241 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.46□□□□□ -0.58
CTPS2-202ENST00000380241 A2MP01023 1474 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms