RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 TTLL5Q6EMB2 1281 aa5.03□□□□□ -1.6
BRCA2-201ENST00000380152 CNTROBQ8N137 903 aa5.03□□□□□ -1.6
BRCA2-201ENST00000380152 CUL7Q14999 1698 aa5.03□□□□□ -1.6
BRCA2-201ENST00000380152 ERC2O15083 957 aa5.03□□□□□ -1.6
BRCA2-201ENST00000380152 TRIM29Q14134 588 aa5.03□□□□□ -1.6
BRCA2-201ENST00000380152 HSP90B2PQ58FF3 399 aa5.03□□□□□ -1.6
BRCA2-201ENST00000380152 TMEM57Q8N5G2 664 aa5.03□□□□□ -1.6
BRCA2-201ENST00000380152 CCDC192P0DO97 292 aa5.03□□□□□ -1.6
BRCA2-201ENST00000380152 RPRD2Q5VT52 1461 aaKnown RBP5.03□□□□□ -1.6
BRCA2-201ENST00000380152 ERICH4A6NGS2 130 aa5.03□□□□□ -1.6
BRCA2-201ENST00000380152 NEXNQ0ZGT2 675 aa5.03□□□□□ -1.6
BRCA2-201ENST00000380152 PDILTQ8N807 584 aa5.03□□□□□ -1.6
BRCA2-201ENST00000380152 ZNF428Q96B54 188 aa5.03□□□□□ -1.6
BRCA2-201ENST00000380152 PLEKHH2Q8IVE3 1493 aa5.03□□□□□ -1.6
BRCA2-201ENST00000380152 TNPO1Q92973 898 aaKnown RBP5.03□□□□□ -1.6
BRCA2-201ENST00000380152 NESP48681 1621 aa5.03□□□□□ -1.6
BRCA2-201ENST00000380152 PATL2C9JE40 543 aaKnown RBP5.03□□□□□ -1.6
BRCA2-201ENST00000380152 SYNE3Q6ZMZ3 975 aa5.03□□□□□ -1.6
BRCA2-201ENST00000380152 PCMTD1Q96MG8 357 aaPredicted RBP5.03□□□□□ -1.6
BRCA2-201ENST00000380152 XPCQ01831 940 aaPredicted RBP5.02□□□□□ -1.61
BRCA2-201ENST00000380152 HOOK1Q9UJC3 728 aaKnown RBP5.02□□□□□ -1.61
BRCA2-201ENST00000380152 SETD1BQ9UPS6 1966 aaKnown RBP5.02□□□□□ -1.61
BRCA2-201ENST00000380152 CPLX1O14810 134 aa5.02□□□□□ -1.61
BRCA2-201ENST00000380152 PSMA5P28066 241 aa5.02□□□□□ -1.61
BRCA2-201ENST00000380152 KINO60870 393 aaKnown RBP5.02□□□□□ -1.61
BRCA2-201ENST00000380152 CSB-PGBD3P0DP91 1061 aa5.02□□□□□ -1.61
BRCA2-201ENST00000380152 PRKAR2BP31323 418 aa5.02□□□□□ -1.61
BRCA2-201ENST00000380152 NINLQ9Y2I6 1382 aa5.02□□□□□ -1.61
BRCA2-201ENST00000380152 PDCL2Q8N4E4 241 aa5.02□□□□□ -1.61
BRCA2-201ENST00000380152 LRRCC1Q9C099 1032 aa5.02□□□□□ -1.61
BRCA2-201ENST00000380152 SLC4A2P04920 1241 aa5.02□□□□□ -1.61
BRCA2-201ENST00000380152 WDR63Q8IWG1 891 aa5.02□□□□□ -1.61
BRCA2-201ENST00000380152 XRCC6P12956 609 aaKnown RBP eCLIP5.02□□□□□ -1.61
BRCA2-201ENST00000380152 RARSP54136 660 aaKnown RBP5.02□□□□□ -1.61
BRCA2-201ENST00000380152 AIMP1Q12904 312 aaKnown RBP5.02□□□□□ -1.61
BRCA2-201ENST00000380152 STK3Q13188 491 aa5.02□□□□□ -1.61
BRCA2-201ENST00000380152 CAMK4Q16566 473 aa5.02□□□□□ -1.61
BRCA2-201ENST00000380152 ZHX1Q9UKY1 873 aaPredicted RBP5.02□□□□□ -1.61
BRCA2-201ENST00000380152 MAP3K1Q13233 1512 aa5.02□□□□□ -1.61
BRCA2-201ENST00000380152 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.02□□□□□ -1.61
BRCA2-201ENST00000380152 SPDYE4A6NLX3 237 aa5.02□□□□□ -1.61
BRCA2-201ENST00000380152 UBTFL1P0CB47 393 aaPredicted RBP5.02□□□□□ -1.61
BRCA2-201ENST00000380152 C1orf141Q5JVX7 400 aa5.02□□□□□ -1.61
BRCA2-201ENST00000380152 IPO7O95373 1038 aaKnown RBP5.01□□□□□ -1.61
BRCA2-201ENST00000380152 GNAI2P04899 355 aa5.01□□□□□ -1.61
BRCA2-201ENST00000380152 SURF6O75683 361 aaKnown RBP5.01□□□□□ -1.61
BRCA2-201ENST00000380152 SMC2O95347 1197 aa5.01□□□□□ -1.61
BRCA2-201ENST00000380152 CPLX2Q6PUV4 134 aaKnown RBP5.01□□□□□ -1.61
BRCA2-201ENST00000380152 CWC27Q6UX04 472 aaKnown RBP5.01□□□□□ -1.61
BRCA2-201ENST00000380152 CLCN1P35523 988 aa5.01□□□□□ -1.61
BRCA2-201ENST00000380152 TRDNQ13061 729 aa5.01□□□□□ -1.61
BRCA2-201ENST00000380152 WDR33Q9C0J8 1336 aaKnown RBP5.01□□□□□ -1.61
BRCA2-201ENST00000380152 KDM4AO75164 1064 aa5.01□□□□□ -1.61
BRCA2-201ENST00000380152 CCDC73Q6ZRK6 1079 aa5.01□□□□□ -1.61
BRCA2-201ENST00000380152 CLASRPQ8N2M8 674 aaKnown RBP5.01□□□□□ -1.61
BRCA2-201ENST00000380152 RUFY1Q96T51 708 aa5.01□□□□□ -1.61
BRCA2-201ENST00000380152 LRPPRCP42704 1394 aaKnown RBP5.01□□□□□ -1.61
BRCA2-201ENST00000380152 CWC15Q9P013 229 aaKnown RBP5.01□□□□□ -1.61
BRCA2-201ENST00000380152 BRPF1P55201 1214 aaPredicted RBP5.01□□□□□ -1.61
BRCA2-201ENST00000380152 TNMDQ9H2S6 317 aa5.01□□□□□ -1.61
BRCA2-201ENST00000380152 AKAP17AQ02040 695 aaKnown RBP5.01□□□□□ -1.61
BRCA2-201ENST00000380152 CFAP43Q8NDM7 1665 aa5.01□□□□□ -1.61
BRCA2-201ENST00000380152 PDCP20941 246 aa5.01□□□□□ -1.61
BRCA2-201ENST00000380152 G3BP1Q13283 466 aaKnown RBP eCLIP5.01□□□□□ -1.61
BRCA2-201ENST00000380152 LARP1BQ659C4 914 aaKnown RBP5.01□□□□□ -1.61
BRCA2-201ENST00000380152 LEKR1Q6ZMV7 388 aa5.01□□□□□ -1.61
BRCA2-201ENST00000380152 CHMP4CQ96CF2 233 aa5.01□□□□□ -1.61
BRCA2-201ENST00000380152 OLFM4Q6UX06 510 aa5.01□□□□□ -1.61
BRCA2-201ENST00000380152 FILIP1Q7Z7B0 1213 aa5.01□□□□□ -1.61
BRCA2-201ENST00000380152 ANKRD30BQ9BXX2 1392 aa5□□□□□ -1.61
BRCA2-201ENST00000380152 C9orf84Q5VXU9 1444 aa5□□□□□ -1.61
BRCA2-201ENST00000380152 NEUROD6Q96NK8 337 aa5□□□□□ -1.61
BRCA2-201ENST00000380152 LRRFIP1Q32MZ4 808 aaKnown RBP5□□□□□ -1.61
BRCA2-201ENST00000380152 C8orf34Q49A92 452 aa5□□□□□ -1.61
BRCA2-201ENST00000380152 GDPD2Q9HCC8 539 aa5□□□□□ -1.61
BRCA2-201ENST00000380152 TBC1D32Q96NH3 1257 aa5□□□□□ -1.61
BRCA2-201ENST00000380152 SCAPERQ9BY12 1400 aa5□□□□□ -1.61
BRCA2-201ENST00000380152 CCDC112Q8NEF3 446 aa5□□□□□ -1.61
BRCA2-201ENST00000380152 H0YHG0 523 aa5□□□□□ -1.61
BRCA2-201ENST00000380152 CCDC30Q5VVM6 783 aa5□□□□□ -1.61
BRCA2-201ENST00000380152 KRT85P78386 507 aa5□□□□□ -1.61
BRCA2-201ENST00000380152 CIZ1Q9ULV3 898 aaPredicted RBP5□□□□□ -1.61
BRCA2-201ENST00000380152 SERPINC1P01008 464 aa5□□□□□ -1.61
BRCA2-201ENST00000380152 AFAP1Q8N556 730 aa5□□□□□ -1.61
BRCA2-201ENST00000380152 PPP4R3BQ5MIZ7 849 aa5□□□□□ -1.61
BRCA2-201ENST00000380152 AQRO60306 1485 aaKnown RBP eCLIP5□□□□□ -1.61
BRCA2-201ENST00000380152 ERICH2A1L162 156 aa4.99□□□□□ -1.61
BRCA2-201ENST00000380152 TRIM27P14373 513 aa4.99□□□□□ -1.61
BRCA2-201ENST00000380152 ANKRD20A12PQ8NF67 263 aa4.99□□□□□ -1.61
BRCA2-201ENST00000380152 C16orf45Q96MC5 204 aaPredicted RBP4.99□□□□□ -1.61
BRCA2-201ENST00000380152 LARP6Q9BRS8 491 aaKnown RBP4.99□□□□□ -1.61
BRCA2-201ENST00000380152 CYP46A1Q9Y6A2 500 aa4.99□□□□□ -1.61
BRCA2-201ENST00000380152 SEC24BO95487 1268 aa4.99□□□□□ -1.61
BRCA2-201ENST00000380152 SSFA2P28290 1259 aa4.99□□□□□ -1.61
BRCA2-201ENST00000380152 EXOC6BQ9Y2D4 811 aa4.99□□□□□ -1.61
BRCA2-201ENST00000380152 EPRSP07814 1512 aaKnown RBP4.99□□□□□ -1.61
BRCA2-201ENST00000380152 PRG4Q92954 1404 aaPredicted RBP4.99□□□□□ -1.61
BRCA2-201ENST00000380152 DDX58O95786 925 aaKnown RBP4.99□□□□□ -1.61
BRCA2-201ENST00000380152 NFXL1Q6ZNB6 911 aa4.99□□□□□ -1.61
BRCA2-201ENST00000380152 CASTP20810 708 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms