RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 SYNMO15061 1565 aa8.85□□□□□ -0.99
DDX58-202ENST00000379883 SYCE3A1L190 88 aa8.84□□□□□ -0.99
DDX58-202ENST00000379883 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.84□□□□□ -0.99
DDX58-202ENST00000379883 LAMC3Q9Y6N6 1575 aa8.84□□□□□ -0.99
DDX58-202ENST00000379883 ANKRD45Q5TZF3 282 aa8.84□□□□□ -0.99
DDX58-202ENST00000379883 ATF7IPQ6VMQ6 1270 aa8.84□□□□□ -0.99
DDX58-202ENST00000379883 GAS2L2Q8NHY3 880 aa8.84□□□□□ -0.99
DDX58-202ENST00000379883 DNAJC2Q99543 621 aaKnown RBP8.84□□□□□ -0.99
DDX58-202ENST00000379883 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.84□□□□□ -0.99
DDX58-202ENST00000379883 FAM135AQ9P2D6 1515 aa8.84□□□□□ -0.99
DDX58-202ENST00000379883 ARHGAP31Q2M1Z3 1444 aa8.84□□□□□ -0.99
DDX58-202ENST00000379883 KANK1Q14678 1352 aa8.83□□□□□ -1
DDX58-202ENST00000379883 MCM2P49736 904 aa8.83□□□□□ -1
DDX58-202ENST00000379883 CGNQ9P2M7 1197 aaKnown RBP8.83□□□□□ -1
DDX58-202ENST00000379883 MAGI2Q86UL8 1455 aa8.83□□□□□ -1
DDX58-202ENST00000379883 WDR7Q9Y4E6 1490 aa8.83□□□□□ -1
DDX58-202ENST00000379883 INTS3Q68E01 1043 aaKnown RBP8.83□□□□□ -1
DDX58-202ENST00000379883 RNF214Q8ND24 703 aa8.83□□□□□ -1
DDX58-202ENST00000379883 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.83□□□□□ -1
DDX58-202ENST00000379883 RRP7AQ9Y3A4 280 aaKnown RBP8.83□□□□□ -1
DDX58-202ENST00000379883 FAM193AP78312 1265 aa8.82□□□□□ -1
DDX58-202ENST00000379883 CALCOCO1Q9P1Z2 691 aa8.82□□□□□ -1
DDX58-202ENST00000379883 GTF2E1P29083 439 aaPredicted RBP8.82□□□□□ -1
DDX58-202ENST00000379883 KLHL34Q8N239 644 aa8.82□□□□□ -1
DDX58-202ENST00000379883 BCL11BQ9C0K0 894 aaPredicted RBP8.82□□□□□ -1
DDX58-202ENST00000379883 REC8O95072 547 aa8.82□□□□□ -1
DDX58-202ENST00000379883 MCCP23508 829 aa8.82□□□□□ -1
DDX58-202ENST00000379883 PRG4Q92954 1404 aaPredicted RBP8.82□□□□□ -1
DDX58-202ENST00000379883 A2MP01023 1474 aa8.82□□□□□ -1
DDX58-202ENST00000379883 SCAF11Q99590 1463 aaKnown RBP8.81□□□□□ -1
DDX58-202ENST00000379883 TBC1D9Q6ZT07 1266 aa8.81□□□□□ -1
DDX58-202ENST00000379883 CREBRFQ8IUR6 639 aa8.81□□□□□ -1
DDX58-202ENST00000379883 TIGD1Q96MW7 591 aa8.81□□□□□ -1
DDX58-202ENST00000379883 CROCC2H7BZ55 1655 aa8.81□□□□□ -1
DDX58-202ENST00000379883 GRIN2AQ12879 1464 aa8.81□□□□□ -1
DDX58-202ENST00000379883 NUP153P49790 1475 aaKnown RBP8.8□□□□□ -1
DDX58-202ENST00000379883 ZBTB7CA1YPR0 619 aa8.8□□□□□ -1
DDX58-202ENST00000379883 SYCP1Q15431 976 aa8.8□□□□□ -1
DDX58-202ENST00000379883 DMRT2Q9Y5R5 561 aa8.8□□□□□ -1
DDX58-202ENST00000379883 BCL2L12Q9HB09 334 aa8.8□□□□□ -1
DDX58-202ENST00000379883 RBM27Q9P2N5 1060 aaKnown RBP8.8□□□□□ -1
DDX58-202ENST00000379883 RAPGEF6Q8TEU7 1601 aa8.8□□□□□ -1
DDX58-202ENST00000379883 SPDYE4A6NLX3 237 aa8.8□□□□□ -1
DDX58-202ENST00000379883 ZNF428Q96B54 188 aa8.8□□□□□ -1
DDX58-202ENST00000379883 TRIM27P14373 513 aa8.8□□□□□ -1
DDX58-202ENST00000379883 FKBP5Q13451 457 aaPredicted RBP8.8□□□□□ -1
DDX58-202ENST00000379883 ABCC10Q5T3U5 1492 aa8.79□□□□□ -1
DDX58-202ENST00000379883 U2AF1L5P0DN76 240 aaPredicted RBP8.79□□□□□ -1
DDX58-202ENST00000379883 PLCB2Q00722 1185 aa8.79□□□□□ -1
DDX58-202ENST00000379883 U2AF1Q01081 240 aaKnown RBP eCLIP8.79□□□□□ -1
DDX58-202ENST00000379883 NOB1Q9ULX3 412 aaKnown RBP8.79□□□□□ -1
DDX58-202ENST00000379883 ZBTB40Q9NUA8 1239 aa8.79□□□□□ -1
DDX58-202ENST00000379883 TNNQ9UQP3 1299 aa8.78□□□□□ -1
DDX58-202ENST00000379883 ALDH1L2Q3SY69 923 aa8.78□□□□□ -1
DDX58-202ENST00000379883 SPTLC3Q9NUV7 552 aa8.78□□□□□ -1
DDX58-202ENST00000379883 ABCC11Q96J66 1382 aa8.78□□□□□ -1
DDX58-202ENST00000379883 TNNT3P45378 269 aaPredicted RBP8.78□□□□□ -1
DDX58-202ENST00000379883 KCNJ4P48050 445 aa8.78□□□□□ -1
DDX58-202ENST00000379883 ATP2B3Q16720 1220 aa8.78□□□□□ -1
DDX58-202ENST00000379883 TMEM57Q8N5G2 664 aa8.78□□□□□ -1
DDX58-202ENST00000379883 GPT2Q8TD30 523 aa8.78□□□□□ -1
DDX58-202ENST00000379883 ATP6V1DQ9Y5K8 247 aa8.78□□□□□ -1
DDX58-202ENST00000379883 ADCY5O95622 1261 aa8.77□□□□□ -1
DDX58-202ENST00000379883 CYP2E1P05181 493 aaPredicted RBP8.77□□□□□ -1
DDX58-202ENST00000379883 HNRNPMP52272 730 aaKnown RBP eCLIP8.77□□□□□ -1
DDX58-202ENST00000379883 EXOSC9Q06265 439 aaKnown RBP8.77□□□□□ -1
DDX58-202ENST00000379883 TMEM63CQ9P1W3 806 aa8.77□□□□□ -1
DDX58-202ENST00000379883 IL16Q14005 1332 aa8.77□□□□□ -1
DDX58-202ENST00000379883 REREQ9P2R6 1566 aa8.77□□□□□ -1
DDX58-202ENST00000379883 CCDC183Q5T5S1 534 aa8.77□□□□□ -1.01
DDX58-202ENST00000379883 KIF2CQ99661 725 aa8.77□□□□□ -1.01
DDX58-202ENST00000379883 PAXBP1Q9Y5B6 917 aa8.77□□□□□ -1.01
DDX58-202ENST00000379883 SYNJ2O15056 1496 aa8.77□□□□□ -1.01
DDX58-202ENST00000379883 HTATSF1O43719 755 aaKnown RBP8.77□□□□□ -1.01
DDX58-202ENST00000379883 KRT222Q8N1A0 295 aa8.77□□□□□ -1.01
DDX58-202ENST00000379883 ZNF710Q8N1W2 664 aa8.77□□□□□ -1.01
DDX58-202ENST00000379883 PDS5BQ9NTI5 1447 aa8.76□□□□□ -1.01
DDX58-202ENST00000379883 VGFO15240 615 aaPredicted RBP8.76□□□□□ -1.01
DDX58-202ENST00000379883 RBM42Q9BTD8 480 aaKnown RBP8.76□□□□□ -1.01
DDX58-202ENST00000379883 TMEM51Q9NW97 253 aa8.76□□□□□ -1.01
DDX58-202ENST00000379883 CARMIL2Q6F5E8 1435 aa8.76□□□□□ -1.01
DDX58-202ENST00000379883 RNF20Q5VTR2 975 aa8.76□□□□□ -1.01
DDX58-202ENST00000379883 SSH1Q8WYL5 1049 aa8.76□□□□□ -1.01
DDX58-202ENST00000379883 PHF23Q9BUL5 403 aaPredicted RBP8.76□□□□□ -1.01
DDX58-202ENST00000379883 CCDC112Q8NEF3 446 aa8.76□□□□□ -1.01
DDX58-202ENST00000379883 WDR33Q9C0J8 1336 aaKnown RBP8.76□□□□□ -1.01
DDX58-202ENST00000379883 CD2BP2O95400 341 aaKnown RBP8.75□□□□□ -1.01
DDX58-202ENST00000379883 U2AF2P26368 475 aaKnown RBP eCLIP8.75□□□□□ -1.01
DDX58-202ENST00000379883 ANKRD7Q92527 254 aa8.75□□□□□ -1.01
DDX58-202ENST00000379883 USP25Q9UHP3 1055 aa8.75□□□□□ -1.01
DDX58-202ENST00000379883 ANKRD36BQ8N2N9 1353 aa8.75□□□□□ -1.01
DDX58-202ENST00000379883 TEX35Q5T0J7 233 aa8.75□□□□□ -1.01
DDX58-202ENST00000379883 DRC7Q8IY82 874 aa8.75□□□□□ -1.01
DDX58-202ENST00000379883 SMTNL1A8MU46 457 aa8.75□□□□□ -1.01
DDX58-202ENST00000379883 RIOK3O14730 519 aaKnown RBP8.75□□□□□ -1.01
DDX58-202ENST00000379883 SLC20A2Q08357 652 aa8.74□□□□□ -1.01
DDX58-202ENST00000379883 KIAA0556O60303 1618 aa8.74□□□□□ -1.01
DDX58-202ENST00000379883 ADCY10Q96PN6 1610 aa8.74□□□□□ -1.01
DDX58-202ENST00000379883 KDM4AO75164 1064 aa8.74□□□□□ -1.01
DDX58-202ENST00000379883 IRX3P78415 501 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms