RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 ROBO2Q9HCK4 1378 aa19.34■□□□□ 0.69
PRNP-201ENST00000379440 KIF20BQ96Q89 1820 aa19.34■□□□□ 0.69
PRNP-201ENST00000379440 SLC26A8Q96RN1 970 aa19.34■□□□□ 0.69
PRNP-201ENST00000379440 CCDC27Q2M243 656 aa19.33■□□□□ 0.68
PRNP-201ENST00000379440 WDR63Q8IWG1 891 aa19.33■□□□□ 0.68
PRNP-201ENST00000379440 PLEKHF1Q96S99 279 aa19.33■□□□□ 0.68
PRNP-201ENST00000379440 KNDC1Q76NI1 1749 aa19.32■□□□□ 0.68
PRNP-201ENST00000379440 CPSF1Q10570 1443 aaKnown RBP19.32■□□□□ 0.68
PRNP-201ENST00000379440 PPM1GO15355 546 aaPredicted RBP19.32■□□□□ 0.68
PRNP-201ENST00000379440 NME9Q86XW9 330 aa19.32■□□□□ 0.68
PRNP-201ENST00000379440 PKNOX2Q96KN3 472 aa19.32■□□□□ 0.68
PRNP-201ENST00000379440 ZRANB1Q9UGI0 708 aa19.32■□□□□ 0.68
PRNP-201ENST00000379440 CCDC61Q9Y6R9 512 aa19.32■□□□□ 0.68
PRNP-201ENST00000379440 CPS1P31327 1500 aa19.32■□□□□ 0.68
PRNP-201ENST00000379440 FANCIQ9NVI1 1328 aa19.31■□□□□ 0.68
PRNP-201ENST00000379440 DIAPH1O60610 1272 aaKnown RBP19.31■□□□□ 0.68
PRNP-201ENST00000379440 PLEKHG1Q9ULL1 1385 aa19.31■□□□□ 0.68
PRNP-201ENST00000379440 POLKQ9UBT6 870 aa19.31■□□□□ 0.68
PRNP-201ENST00000379440 C3P01024 1663 aa19.3■□□□□ 0.68
PRNP-201ENST00000379440 PRR36Q9H6K5 1346 aa19.3■□□□□ 0.68
PRNP-201ENST00000379440 PNPLA6Q8IY17 1366 aa19.3■□□□□ 0.68
PRNP-201ENST00000379440 MSH5O43196 834 aa19.29■□□□□ 0.68
PRNP-201ENST00000379440 SKAP1Q86WV1 359 aa19.29■□□□□ 0.68
PRNP-201ENST00000379440 ADGRB2O60241 1585 aa19.28■□□□□ 0.68
PRNP-201ENST00000379440 DEKP35659 375 aaKnown RBP19.28■□□□□ 0.68
PRNP-201ENST00000379440 EID1Q9Y6B2 187 aa19.28■□□□□ 0.68
PRNP-201ENST00000379440 EDC4Q6P2E9 1401 aaKnown RBP19.28■□□□□ 0.68
PRNP-201ENST00000379440 NUTM2FA1L443 756 aa19.28■□□□□ 0.68
PRNP-201ENST00000379440 TMPOP42166 694 aaKnown RBP19.28■□□□□ 0.68
PRNP-201ENST00000379440 MAPK8IP3Q9UPT6 1336 aa19.26■□□□□ 0.67
PRNP-201ENST00000379440 EMILIN1Q9Y6C2 1016 aa19.26■□□□□ 0.67
PRNP-201ENST00000379440 PTPRUQ92729 1446 aa19.26■□□□□ 0.67
PRNP-201ENST00000379440 NCBP3Q53F19 620 aaKnown RBP19.26■□□□□ 0.67
PRNP-201ENST00000379440 TRIM35Q9UPQ4 493 aa19.26■□□□□ 0.67
PRNP-201ENST00000379440 FER1L4A9Z1Z3 1794 aa19.25■□□□□ 0.67
PRNP-201ENST00000379440 RARSP54136 660 aaKnown RBP19.25■□□□□ 0.67
PRNP-201ENST00000379440 CDC42BPGQ6DT37 1551 aa19.25■□□□□ 0.67
PRNP-201ENST00000379440 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.25■□□□□ 0.67
PRNP-201ENST00000379440 FRAT1Q92837 279 aaPredicted RBP19.24■□□□□ 0.67
PRNP-201ENST00000379440 KDM2BQ8NHM5 1336 aa19.24■□□□□ 0.67
PRNP-201ENST00000379440 TCERG1O14776 1098 aaKnown RBP19.23■□□□□ 0.67
PRNP-201ENST00000379440 CANXP27824 592 aaKnown RBP19.23■□□□□ 0.67
PRNP-201ENST00000379440 TSR2Q969E8 191 aaKnown RBP19.23■□□□□ 0.67
PRNP-201ENST00000379440 BCL2L13Q9BXK5 485 aa19.23■□□□□ 0.67
PRNP-201ENST00000379440 MYH16Q9H6N6 1097 aa19.23■□□□□ 0.67
PRNP-201ENST00000379440 AMOTL2Q9Y2J4 779 aa19.23■□□□□ 0.67
PRNP-201ENST00000379440 MAP2P11137 1827 aaKnown RBP19.23■□□□□ 0.67
PRNP-201ENST00000379440 RIPK4P57078 832 aa19.22■□□□□ 0.67
PRNP-201ENST00000379440 PANK1Q8TE04 598 aa19.22■□□□□ 0.67
PRNP-201ENST00000379440 COG3Q96JB2 828 aa19.22■□□□□ 0.67
PRNP-201ENST00000379440 PODXL2Q9NZ53 605 aa19.22■□□□□ 0.67
PRNP-201ENST00000379440 RRS1Q15050 365 aaKnown RBP19.21■□□□□ 0.67
PRNP-201ENST00000379440 ARHGAP23Q9P227 1491 aa19.21■□□□□ 0.67
PRNP-201ENST00000379440 SLIT1O75093 1534 aa19.21■□□□□ 0.67
PRNP-201ENST00000379440 THEMISQ8N1K5 641 aaPredicted RBP19.21■□□□□ 0.67
PRNP-201ENST00000379440 ZNF692Q9BU19 519 aaPredicted RBP19.21■□□□□ 0.67
PRNP-201ENST00000379440 FCHSD2O94868 740 aa19.2■□□□□ 0.66
PRNP-201ENST00000379440 HMOX1P09601 288 aa19.2■□□□□ 0.66
PRNP-201ENST00000379440 PDE3AQ14432 1141 aa19.2■□□□□ 0.66
PRNP-201ENST00000379440 MON2Q7Z3U7 1717 aa19.2■□□□□ 0.66
PRNP-201ENST00000379440 PRKAR2BP31323 418 aa19.2■□□□□ 0.66
PRNP-201ENST00000379440 COG6Q9Y2V7 657 aa19.2■□□□□ 0.66
PRNP-201ENST00000379440 RSPH6AQ9H0K4 717 aa19.19■□□□□ 0.66
PRNP-201ENST00000379440 TNNQ9UQP3 1299 aa19.19■□□□□ 0.66
PRNP-201ENST00000379440 TBX22Q9Y458 520 aa19.19■□□□□ 0.66
PRNP-201ENST00000379440 ACEP12821 1306 aa19.19■□□□□ 0.66
PRNP-201ENST00000379440 CENPQQ7L2Z9 268 aaPredicted RBP19.19■□□□□ 0.66
PRNP-201ENST00000379440 PNNQ9H307 717 aaKnown RBP19.19■□□□□ 0.66
PRNP-201ENST00000379440 AKAP12Q02952 1782 aa19.18■□□□□ 0.66
PRNP-201ENST00000379440 LRRC7Q96NW7 1537 aa19.18■□□□□ 0.66
PRNP-201ENST00000379440 ITSN1Q15811 1721 aa19.18■□□□□ 0.66
PRNP-201ENST00000379440 IL13P35225 146 aa19.18■□□□□ 0.66
PRNP-201ENST00000379440 EXOSC9Q06265 439 aaKnown RBP19.17■□□□□ 0.66
PRNP-201ENST00000379440 PHACTR3Q96KR7 559 aa19.17■□□□□ 0.66
PRNP-201ENST00000379440 AATKQ6ZMQ8 1374 aa19.17■□□□□ 0.66
PRNP-201ENST00000379440 TTC21BQ7Z4L5 1316 aa19.16■□□□□ 0.66
PRNP-201ENST00000379440 PLEKHG3A1L390 1219 aa19.16■□□□□ 0.66
PRNP-201ENST00000379440 PDE4AP27815 886 aa19.16■□□□□ 0.66
PRNP-201ENST00000379440 RLBP1P12271 317 aa19.15■□□□□ 0.66
PRNP-201ENST00000379440 MS4A1P11836 297 aa19.15■□□□□ 0.66
PRNP-201ENST00000379440 PMFBP1Q8TBY8 1022 aa19.14■□□□□ 0.65
PRNP-201ENST00000379440 CLUAP1Q96AJ1 413 aa19.14■□□□□ 0.65
PRNP-201ENST00000379440 CDK12Q9NYV4 1490 aaPredicted RBP19.13■□□□□ 0.65
PRNP-201ENST00000379440 NEFMP07197 916 aa19.13■□□□□ 0.65
PRNP-201ENST00000379440 IGHDP01880 384 aa19.12■□□□□ 0.65
PRNP-201ENST00000379440 BACH2Q9BYV9 841 aa19.12■□□□□ 0.65
PRNP-201ENST00000379440 IL16Q14005 1332 aa19.12■□□□□ 0.65
PRNP-201ENST00000379440 TOPAZ1Q8N9V7 1692 aa19.12■□□□□ 0.65
PRNP-201ENST00000379440 USP6P35125 1406 aa19.11■□□□□ 0.65
PRNP-201ENST00000379440 NFE2L2Q16236 605 aa19.1■□□□□ 0.65
PRNP-201ENST00000379440 THUMPD2Q9BTF0 503 aaKnown RBP19.1■□□□□ 0.65
PRNP-201ENST00000379440 PTCH1Q13635 1447 aa19.1■□□□□ 0.65
PRNP-201ENST00000379440 KCNA6P17658 529 aa19.09■□□□□ 0.65
PRNP-201ENST00000379440 LAS1LQ9Y4W2 734 aaKnown RBP19.09■□□□□ 0.65
PRNP-201ENST00000379440 NRKQ7Z2Y5 1582 aa19.09■□□□□ 0.65
PRNP-201ENST00000379440 SOX12O15370 315 aa19.09■□□□□ 0.65
PRNP-201ENST00000379440 CT47B1P0C2W7 299 aaPredicted RBP19.09■□□□□ 0.65
PRNP-201ENST00000379440 SSH1Q8WYL5 1049 aa19.08■□□□□ 0.65
PRNP-201ENST00000379440 SMC4Q9NTJ3 1288 aa19.08■□□□□ 0.65
PRNP-201ENST00000379440 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms