RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 CCDC158Q5M9N0 1113 aa13.18□□□□□ -0.3
LINC00654-201ENST00000379053 IFT140Q96RY7 1462 aa13.18□□□□□ -0.3
LINC00654-201ENST00000379053 CNTROBQ8N137 903 aa13.17□□□□□ -0.3
LINC00654-201ENST00000379053 VSIG10Q8N0Z9 540 aa13.17□□□□□ -0.3
LINC00654-201ENST00000379053 MPHOSPH8Q99549 860 aa13.17□□□□□ -0.3
LINC00654-201ENST00000379053 EPS15P42566 896 aa13.17□□□□□ -0.3
LINC00654-201ENST00000379053 HDGFL1Q5TGJ6 251 aa13.17□□□□□ -0.3
LINC00654-201ENST00000379053 CCDC73Q6ZRK6 1079 aa13.17□□□□□ -0.3
LINC00654-201ENST00000379053 CABP1Q9NZU7 370 aa13.17□□□□□ -0.3
LINC00654-201ENST00000379053 BICDL1Q6ZP65 573 aa13.17□□□□□ -0.3
LINC00654-201ENST00000379053 SULT6B1Q6IMI4 303 aa13.17□□□□□ -0.3
LINC00654-201ENST00000379053 ZFYVE27Q5T4F4 411 aa13.16□□□□□ -0.3
LINC00654-201ENST00000379053 ZBED9Q6R2W3 1325 aa13.16□□□□□ -0.3
LINC00654-201ENST00000379053 CUX1P39880 1505 aa13.16□□□□□ -0.3
LINC00654-201ENST00000379053 ZC3H6P61129 1189 aaKnown RBP13.16□□□□□ -0.3
LINC00654-201ENST00000379053 NAP1L1P55209 391 aaKnown RBP13.15□□□□□ -0.3
LINC00654-201ENST00000379053 PNISRQ8TF01 805 aaKnown RBP13.15□□□□□ -0.3
LINC00654-201ENST00000379053 OFD1O75665 1012 aa13.15□□□□□ -0.3
LINC00654-201ENST00000379053 PDE4AP27815 886 aa13.15□□□□□ -0.3
LINC00654-201ENST00000379053 PSMA5P28066 241 aa13.15□□□□□ -0.3
LINC00654-201ENST00000379053 SKOR2Q2VWA4 1001 aaPredicted RBP13.15□□□□□ -0.3
LINC00654-201ENST00000379053 POLD1P28340 1107 aa13.15□□□□□ -0.3
LINC00654-201ENST00000379053 MYL6BP14649 208 aa13.15□□□□□ -0.3
LINC00654-201ENST00000379053 ATP2B1P20020 1258 aa13.15□□□□□ -0.3
LINC00654-201ENST00000379053 ZSCAN29Q8IWY8 852 aaPredicted RBP13.15□□□□□ -0.3
LINC00654-201ENST00000379053 ZNF428Q96B54 188 aa13.15□□□□□ -0.3
LINC00654-201ENST00000379053 TCP11L2Q8N4U5 519 aa13.14□□□□□ -0.31
LINC00654-201ENST00000379053 BEGAINQ9BUH8 593 aa13.14□□□□□ -0.31
LINC00654-201ENST00000379053 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.14□□□□□ -0.31
LINC00654-201ENST00000379053 CDK5RAP3Q96JB5 506 aa13.14□□□□□ -0.31
LINC00654-201ENST00000379053 ERC1Q8IUD2 1116 aa13.14□□□□□ -0.31
LINC00654-201ENST00000379053 TWISTNBQ3B726 338 aaPredicted RBP13.13□□□□□ -0.31
LINC00654-201ENST00000379053 RTEL1-TNFRSF6BF6WH68 1400 aa13.13□□□□□ -0.31
LINC00654-201ENST00000379053 CCDC57Q2TAC2 916 aa13.13□□□□□ -0.31
LINC00654-201ENST00000379053 PANK1Q8TE04 598 aa13.13□□□□□ -0.31
LINC00654-201ENST00000379053 SASS6Q6UVJ0 657 aa13.12□□□□□ -0.31
LINC00654-201ENST00000379053 BCL11BQ9C0K0 894 aaPredicted RBP13.12□□□□□ -0.31
LINC00654-201ENST00000379053 RSPH6AQ9H0K4 717 aa13.12□□□□□ -0.31
LINC00654-201ENST00000379053 KIF7Q2M1P5 1343 aa13.12□□□□□ -0.31
LINC00654-201ENST00000379053 ADAMTS2O95450 1211 aa13.12□□□□□ -0.31
LINC00654-201ENST00000379053 NACAP1Q9BZK3 213 aa13.12□□□□□ -0.31
LINC00654-201ENST00000379053 KRT18P05783 430 aaKnown RBP13.12□□□□□ -0.31
LINC00654-201ENST00000379053 SLC4A2P04920 1241 aa13.11□□□□□ -0.31
LINC00654-201ENST00000379053 STK11IPQ8N1F8 1099 aa13.11□□□□□ -0.31
LINC00654-201ENST00000379053 ZNF592Q92610 1267 aa13.11□□□□□ -0.31
LINC00654-201ENST00000379053 SIL1Q9H173 461 aa13.11□□□□□ -0.31
LINC00654-201ENST00000379053 SLC12A5Q9H2X9 1139 aa13.11□□□□□ -0.31
LINC00654-201ENST00000379053 CDC45O75419 566 aa13.11□□□□□ -0.31
LINC00654-201ENST00000379053 HIP1O00291 1037 aa13.11□□□□□ -0.31
LINC00654-201ENST00000379053 CNTLNQ9NXG0 1405 aa13.1□□□□□ -0.31
LINC00654-201ENST00000379053 HOMER1Q86YM7 354 aa13.1□□□□□ -0.31
LINC00654-201ENST00000379053 TMOD2Q9NZR1 351 aa13.1□□□□□ -0.31
LINC00654-201ENST00000379053 GNAI2P04899 355 aa13.1□□□□□ -0.31
LINC00654-201ENST00000379053 NCOA2Q15596 1464 aa13.1□□□□□ -0.31
LINC00654-201ENST00000379053 OLFM4Q6UX06 510 aa13.1□□□□□ -0.31
LINC00654-201ENST00000379053 ADAMTS8Q9UP79 889 aa13.1□□□□□ -0.31
LINC00654-201ENST00000379053 EXOSC9Q06265 439 aaKnown RBP13.09□□□□□ -0.31
LINC00654-201ENST00000379053 SRCIN1Q9C0H9 1055 aa13.09□□□□□ -0.31
LINC00654-201ENST00000379053 NCAPD3P42695 1498 aa13.09□□□□□ -0.31
LINC00654-201ENST00000379053 PLEKHH2Q8IVE3 1493 aa13.09□□□□□ -0.31
LINC00654-201ENST00000379053 TXLNAP40222 546 aa13.09□□□□□ -0.31
LINC00654-201ENST00000379053 CCDC7Q96M83 1385 aa13.09□□□□□ -0.31
LINC00654-201ENST00000379053 STARD3NLO95772 234 aa13.09□□□□□ -0.31
LINC00654-201ENST00000379053 SDF4Q9BRK5 362 aa13.09□□□□□ -0.31
LINC00654-201ENST00000379053 LRPPRCP42704 1394 aaKnown RBP13.08□□□□□ -0.32
LINC00654-201ENST00000379053 BTBD11A6QL63 1104 aa13.08□□□□□ -0.32
LINC00654-201ENST00000379053 MPHOSPH10O00566 681 aaKnown RBP13.08□□□□□ -0.32
LINC00654-201ENST00000379053 GPS2Q13227 327 aa13.08□□□□□ -0.32
LINC00654-201ENST00000379053 ZPR1O75312 459 aa13.08□□□□□ -0.32
LINC00654-201ENST00000379053 IGHMBP2P38935 993 aaKnown RBP13.07□□□□□ -0.32
LINC00654-201ENST00000379053 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.07□□□□□ -0.32
LINC00654-201ENST00000379053 HSP90AB2PQ58FF8 381 aa13.07□□□□□ -0.32
LINC00654-201ENST00000379053 NUCB2P80303 420 aa13.07□□□□□ -0.32
LINC00654-201ENST00000379053 AAMPQ13685 434 aa13.07□□□□□ -0.32
LINC00654-201ENST00000379053 RAI14Q9P0K7 980 aa13.07□□□□□ -0.32
LINC00654-201ENST00000379053 RRS1Q15050 365 aaKnown RBP13.07□□□□□ -0.32
LINC00654-201ENST00000379053 KCNH5Q8NCM2 988 aa13.07□□□□□ -0.32
LINC00654-201ENST00000379053 PPP2R1AP30153 589 aa13.06□□□□□ -0.32
LINC00654-201ENST00000379053 SOGA3Q5TF21 947 aa13.06□□□□□ -0.32
LINC00654-201ENST00000379053 NBPF1Q3BBV0 1214 aa13.06□□□□□ -0.32
LINC00654-201ENST00000379053 CASKIN1Q8WXD9 1431 aa13.06□□□□□ -0.32
LINC00654-201ENST00000379053 FKBP4Q02790 459 aaKnown RBP eCLIP13.06□□□□□ -0.32
LINC00654-201ENST00000379053 ZSCAN25Q6NSZ9 544 aa13.06□□□□□ -0.32
LINC00654-201ENST00000379053 ZNF652Q9Y2D9 606 aa13.06□□□□□ -0.32
LINC00654-201ENST00000379053 CCDC85AQ96PX6 553 aaPredicted RBP13.06□□□□□ -0.32
LINC00654-201ENST00000379053 TMOD3Q9NYL9 352 aa13.06□□□□□ -0.32
LINC00654-201ENST00000379053 HFM1A2PYH4 1435 aa13.05□□□□□ -0.32
LINC00654-201ENST00000379053 C1orf115Q9H7X2 142 aa13.05□□□□□ -0.32
LINC00654-201ENST00000379053 CEP126Q9P2H0 1117 aa13.05□□□□□ -0.32
LINC00654-201ENST00000379053 CCT4P50991 539 aaKnown RBP13.05□□□□□ -0.32
LINC00654-201ENST00000379053 C9orf84Q5VXU9 1444 aa13.05□□□□□ -0.32
LINC00654-201ENST00000379053 PTCD1O75127 700 aaKnown RBP13.05□□□□□ -0.32
LINC00654-201ENST00000379053 TTLL12Q14166 644 aaPredicted RBP13.05□□□□□ -0.32
LINC00654-201ENST00000379053 C22orf23Q9BZE7 217 aa13.05□□□□□ -0.32
LINC00654-201ENST00000379053 CHMP5Q9NZZ3 219 aa13.05□□□□□ -0.32
LINC00654-201ENST00000379053 IBSPP21815 317 aaPredicted RBP13.04□□□□□ -0.32
LINC00654-201ENST00000379053 SYCP1Q15431 976 aa13.04□□□□□ -0.32
LINC00654-201ENST00000379053 RPGRIP1LQ68CZ1 1315 aa13.04□□□□□ -0.32
LINC00654-201ENST00000379053 RDXP35241 583 aaKnown RBP13.04□□□□□ -0.32
LINC00654-201ENST00000379053 TRIM22Q8IYM9 498 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms