RNA–Protein interactions for RNA: ENST00000378953.8

C5orf56-203, Transcript of chromosome 5 open reading frame 56, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C5orf56, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C5orf56-203ENST00000378953 ATAD2Q6PL18 1390 aa27.85■■■□□ 2.05
C5orf56-203ENST00000378953 ALS2Q96Q42 1657 aa27.84■■■□□ 2.05
C5orf56-203ENST00000378953 QTRT2Q9H974 415 aaKnown RBP27.84■■■□□ 2.05
C5orf56-203ENST00000378953 RXRBP28702 533 aa27.82■■■□□ 2.04
C5orf56-203ENST00000378953 TESK2Q96S53 571 aa27.82■■■□□ 2.04
C5orf56-203ENST00000378953 SLC24A1O60721 1099 aa27.8■■■□□ 2.04
C5orf56-203ENST00000378953 BRD4O60885 1362 aaPredicted RBP27.8■■■□□ 2.04
C5orf56-203ENST00000378953 USP47Q96K76 1375 aa27.8■■■□□ 2.04
C5orf56-203ENST00000378953 ABTB2Q8N961 1025 aa27.78■■■□□ 2.04
C5orf56-203ENST00000378953 PUS7Q96PZ0 661 aaKnown RBP27.78■■■□□ 2.04
C5orf56-203ENST00000378953 BCL9LQ86UU0 1499 aa27.77■■■□□ 2.04
C5orf56-203ENST00000378953 USP6P35125 1406 aa27.77■■■□□ 2.04
C5orf56-203ENST00000378953 RBM6P78332 1123 aaKnown RBP27.77■■■□□ 2.04
C5orf56-203ENST00000378953 ZNF692Q9BU19 519 aaPredicted RBP27.77■■■□□ 2.04
C5orf56-203ENST00000378953 TRPC5Q9UL62 973 aaPredicted RBP27.77■■■□□ 2.04
C5orf56-203ENST00000378953 MARF1Q9Y4F3 1742 aaKnown RBP27.77■■■□□ 2.04
C5orf56-203ENST00000378953 NUTM2GQ5VZR2 741 aa27.76■■■□□ 2.03
C5orf56-203ENST00000378953 SLIT2O94813 1529 aa27.75■■■□□ 2.03
C5orf56-203ENST00000378953 ABCA3Q99758 1704 aa27.75■■■□□ 2.03
C5orf56-203ENST00000378953 FAM83GA6ND36 823 aa27.73■■■□□ 2.03
C5orf56-203ENST00000378953 UNC5CLQ8IV45 518 aa27.73■■■□□ 2.03
C5orf56-203ENST00000378953 ATRNO75882 1429 aa27.73■■■□□ 2.03
C5orf56-203ENST00000378953 CPSF1Q10570 1443 aaKnown RBP27.73■■■□□ 2.03
C5orf56-203ENST00000378953 SSH2Q76I76 1423 aa27.73■■■□□ 2.03
C5orf56-203ENST00000378953 NLRP13Q86W25 1043 aa27.71■■■□□ 2.03
C5orf56-203ENST00000378953 TMC1Q8TDI8 760 aa27.71■■■□□ 2.03
C5orf56-203ENST00000378953 CDK12Q9NYV4 1490 aaPredicted RBP27.7■■■□□ 2.03
C5orf56-203ENST00000378953 USP19O94966 1318 aa27.68■■■□□ 2.02
C5orf56-203ENST00000378953 TTC21BQ7Z4L5 1316 aa27.68■■■□□ 2.02
C5orf56-203ENST00000378953 CRYBG1Q9Y4K1 1723 aa27.68■■■□□ 2.02
C5orf56-203ENST00000378953 TMF1P82094 1093 aa27.68■■■□□ 2.02
C5orf56-203ENST00000378953 SLC12A5Q9H2X9 1139 aa27.68■■■□□ 2.02
C5orf56-203ENST00000378953 KTN1Q86UP2 1357 aaKnown RBP27.68■■■□□ 2.02
C5orf56-203ENST00000378953 NLRP6P59044 892 aa27.66■■■□□ 2.02
C5orf56-203ENST00000378953 PRDM11Q9NQV5 511 aa27.66■■■□□ 2.02
C5orf56-203ENST00000378953 HDGFL2Q7Z4V5 671 aaPredicted RBP27.65■■■□□ 2.02
C5orf56-203ENST00000378953 GJD4Q96KN9 370 aaPredicted RBP27.65■■■□□ 2.02
C5orf56-203ENST00000378953 TTC21AQ8NDW8 1320 aa27.65■■■□□ 2.02
C5orf56-203ENST00000378953 KIAA0232Q92628 1395 aa27.64■■■□□ 2.02
C5orf56-203ENST00000378953 ZC3H6P61129 1189 aaKnown RBP27.64■■■□□ 2.02
C5orf56-203ENST00000378953 BTG4Q9NY30 223 aa27.64■■■□□ 2.02
C5orf56-203ENST00000378953 TERF2IPQ9NYB0 399 aa27.64■■■□□ 2.02
C5orf56-203ENST00000378953 CD163L1Q9NR16 1453 aa27.64■■■□□ 2.01
C5orf56-203ENST00000378953 VPS72Q15906 364 aa27.63■■■□□ 2.01
C5orf56-203ENST00000378953 AKAP12Q02952 1782 aa27.63■■■□□ 2.01
C5orf56-203ENST00000378953 NINLQ9Y2I6 1382 aa27.62■■■□□ 2.01
C5orf56-203ENST00000378953 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.62■■■□□ 2.01
C5orf56-203ENST00000378953 RGS12O14924 1447 aa27.62■■■□□ 2.01
C5orf56-203ENST00000378953 GCP02774 474 aa27.62■■■□□ 2.01
C5orf56-203ENST00000378953 PHRF1Q9P1Y6 1649 aaKnown RBP27.62■■■□□ 2.01
C5orf56-203ENST00000378953 COL14A1Q05707 1796 aaKnown RBP27.6■■■□□ 2.01
C5orf56-203ENST00000378953 PLCH1Q4KWH8 1693 aa27.6■■■□□ 2.01
C5orf56-203ENST00000378953 CDCA8Q53HL2 280 aa27.6■■■□□ 2.01
C5orf56-203ENST00000378953 NWD2Q9ULI1 1742 aa27.6■■■□□ 2.01
C5orf56-203ENST00000378953 CHRNA2Q15822 529 aa27.59■■■□□ 2.01
C5orf56-203ENST00000378953 A0A1W2PP64 1363 aa27.59■■■□□ 2.01
C5orf56-203ENST00000378953 CPDO75976 1380 aa27.59■■■□□ 2.01
C5orf56-203ENST00000378953 NRKQ7Z2Y5 1582 aa27.58■■■□□ 2.01
C5orf56-203ENST00000378953 PIK3C2AO00443 1686 aa27.57■■■□□ 2
C5orf56-203ENST00000378953 EIF4G2P78344 907 aaKnown RBP eCLIP27.57■■■□□ 2
C5orf56-203ENST00000378953 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.57■■■□□ 2
C5orf56-203ENST00000378953 CCDC9Q9Y3X0 531 aaKnown RBP27.57■■■□□ 2
C5orf56-203ENST00000378953 MON2Q7Z3U7 1717 aa27.55■■■□□ 2
C5orf56-203ENST00000378953 EDC4Q6P2E9 1401 aaKnown RBP27.55■■■□□ 2
C5orf56-203ENST00000378953 SLIT3O75094 1523 aa27.55■■■□□ 2
C5orf56-203ENST00000378953 GLI3P10071 1580 aa27.53■■■□□ 2
C5orf56-203ENST00000378953 USP31Q70CQ4 1352 aa27.52■■■□□ 2
C5orf56-203ENST00000378953 HSPA5P11021 654 aaKnown RBP27.52■■■□□ 2
C5orf56-203ENST00000378953 NME9Q86XW9 330 aa27.52■■■□□ 2
C5orf56-203ENST00000378953 NRAPQ86VF7 1730 aa27.52■■■□□ 2
C5orf56-203ENST00000378953 KCNH5Q8NCM2 988 aa27.51■■□□□ 1.99
C5orf56-203ENST00000378953 ZRANB1Q9UGI0 708 aa27.51■■□□□ 1.99
C5orf56-203ENST00000378953 ANKRD36BQ8N2N9 1353 aa27.5■■□□□ 1.99
C5orf56-203ENST00000378953 SPATA31A5Q5VU36 1347 aa27.48■■□□□ 1.99
C5orf56-203ENST00000378953 SPATA31A7Q8IWB4 1347 aa27.48■■□□□ 1.99
C5orf56-203ENST00000378953 ONECUT3O60422 494 aaPredicted RBP27.48■■□□□ 1.99
C5orf56-203ENST00000378953 STRN4Q9NRL3 753 aa27.48■■□□□ 1.99
C5orf56-203ENST00000378953 ZBTB7CA1YPR0 619 aa27.47■■□□□ 1.99
C5orf56-203ENST00000378953 EVA1CP58658 441 aa27.47■■□□□ 1.99
C5orf56-203ENST00000378953 AATKQ6ZMQ8 1374 aa27.47■■□□□ 1.99
C5orf56-203ENST00000378953 SOX12O15370 315 aa27.46■■□□□ 1.99
C5orf56-203ENST00000378953 ARHGEF25Q86VW2 580 aa27.46■■□□□ 1.99
C5orf56-203ENST00000378953 CAMTA1Q9Y6Y1 1673 aa27.46■■□□□ 1.99
C5orf56-203ENST00000378953 SEPT12Q8IYM1 358 aa27.45■■□□□ 1.98
C5orf56-203ENST00000378953 UPF1Q92900 1129 aaKnown RBP eCLIP27.44■■□□□ 1.98
C5orf56-203ENST00000378953 LMO7Q8WWI1 1683 aa27.43■■□□□ 1.98
C5orf56-203ENST00000378953 SPATA31A1Q5TZJ5 1347 aa27.42■■□□□ 1.98
C5orf56-203ENST00000378953 FAM98CQ17RN3 349 aaKnown RBP27.42■■□□□ 1.98
C5orf56-203ENST00000378953 NFAT5O94916 1531 aa27.41■■□□□ 1.98
C5orf56-203ENST00000378953 LARP1Q6PKG0 1096 aaKnown RBP27.4■■□□□ 1.98
C5orf56-203ENST00000378953 OVOS2A0A0J9YW53 1432 aa27.4■■□□□ 1.98
C5orf56-203ENST00000378953 OVOS2Q6IE36 1432 aa27.4■■□□□ 1.98
C5orf56-203ENST00000378953 USP54Q70EL1 1684 aa27.4■■□□□ 1.98
C5orf56-203ENST00000378953 COL5A2P05997 1499 aaPredicted RBP27.39■■□□□ 1.98
C5orf56-203ENST00000378953 AXIN2Q9Y2T1 843 aa27.39■■□□□ 1.98
C5orf56-203ENST00000378953 POLR3GLQ9BT43 218 aa27.38■■□□□ 1.97
C5orf56-203ENST00000378953 A0A0G2JS52 829 aa27.37■■□□□ 1.97
C5orf56-203ENST00000378953 MYT1Q01538 1121 aa27.37■■□□□ 1.97
C5orf56-203ENST00000378953 COG3Q96JB2 828 aa27.37■■□□□ 1.97
C5orf56-203ENST00000378953 CARD14Q9BXL6 1004 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms