RNA–Protein interactions for RNA: ENST00000378913.6

DCTN3-204, Transcript of dynactin subunit 3, humanhuman

TSL 1 (best) BASIC

Gene DCTN3, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCTN3-204ENST00000378913 LMOD2Q6P5Q4 547 aa13.86□□□□□ -0.19
DCTN3-204ENST00000378913 CABP1Q9NZU7 370 aa13.86□□□□□ -0.19
DCTN3-204ENST00000378913 USP6P35125 1406 aa13.86□□□□□ -0.19
DCTN3-204ENST00000378913 NWD2Q9ULI1 1742 aa13.86□□□□□ -0.19
DCTN3-204ENST00000378913 AFF2P51816 1311 aa13.86□□□□□ -0.19
DCTN3-204ENST00000378913 PAK3O75914 559 aaPredicted RBP13.85□□□□□ -0.19
DCTN3-204ENST00000378913 POTEAQ6S8J7 498 aa13.85□□□□□ -0.19
DCTN3-204ENST00000378913 C8orf37Q96NL8 207 aa13.85□□□□□ -0.19
DCTN3-204ENST00000378913 BRD4O60885 1362 aaPredicted RBP13.84□□□□□ -0.19
DCTN3-204ENST00000378913 CABLES1Q8TDN4 633 aa13.84□□□□□ -0.19
DCTN3-204ENST00000378913 CPSF1Q10570 1443 aaKnown RBP13.83□□□□□ -0.2
DCTN3-204ENST00000378913 SSH2Q76I76 1423 aa13.83□□□□□ -0.2
DCTN3-204ENST00000378913 MYOM1P52179 1685 aa13.83□□□□□ -0.2
DCTN3-204ENST00000378913 CD163L1Q9NR16 1453 aa13.83□□□□□ -0.2
DCTN3-204ENST00000378913 ZNF772Q68DY9 489 aaPredicted RBP13.83□□□□□ -0.2
DCTN3-204ENST00000378913 COL14A1Q05707 1796 aaKnown RBP13.82□□□□□ -0.2
DCTN3-204ENST00000378913 SOCS7O14512 581 aa13.82□□□□□ -0.2
DCTN3-204ENST00000378913 SLC24A1O60721 1099 aa13.82□□□□□ -0.2
DCTN3-204ENST00000378913 NGLY1Q96IV0 654 aa13.82□□□□□ -0.2
DCTN3-204ENST00000378913 PUS7Q96PZ0 661 aaKnown RBP13.82□□□□□ -0.2
DCTN3-204ENST00000378913 USP54Q70EL1 1684 aa13.82□□□□□ -0.2
DCTN3-204ENST00000378913 NRAPQ86VF7 1730 aa13.81□□□□□ -0.2
DCTN3-204ENST00000378913 SLIT2O94813 1529 aa13.81□□□□□ -0.2
DCTN3-204ENST00000378913 PLEKHG5O94827 1062 aa13.81□□□□□ -0.2
DCTN3-204ENST00000378913 HAP1P54257 671 aaPredicted RBP13.81□□□□□ -0.2
DCTN3-204ENST00000378913 BCL9LQ86UU0 1499 aa13.8□□□□□ -0.2
DCTN3-204ENST00000378913 FNBP4Q8N3X1 1017 aaPredicted RBP13.8□□□□□ -0.2
DCTN3-204ENST00000378913 NINLQ9Y2I6 1382 aa13.8□□□□□ -0.2
DCTN3-204ENST00000378913 TMF1P82094 1093 aa13.79□□□□□ -0.2
DCTN3-204ENST00000378913 ZNF692Q9BU19 519 aaPredicted RBP13.79□□□□□ -0.2
DCTN3-204ENST00000378913 USP19O94966 1318 aa13.79□□□□□ -0.2
DCTN3-204ENST00000378913 KTN1Q86UP2 1357 aaKnown RBP13.79□□□□□ -0.2
DCTN3-204ENST00000378913 SLIT3O75094 1523 aa13.79□□□□□ -0.2
DCTN3-204ENST00000378913 NUTM2GQ5VZR2 741 aa13.78□□□□□ -0.2
DCTN3-204ENST00000378913 ABTB2Q8N961 1025 aa13.78□□□□□ -0.2
DCTN3-204ENST00000378913 SLC12A5Q9H2X9 1139 aa13.78□□□□□ -0.2
DCTN3-204ENST00000378913 USP21Q9UK80 565 aa13.78□□□□□ -0.2
DCTN3-204ENST00000378913 ATRNO75882 1429 aa13.78□□□□□ -0.2
DCTN3-204ENST00000378913 A0A1W2PP64 1363 aa13.77□□□□□ -0.21
DCTN3-204ENST00000378913 TTC21BQ7Z4L5 1316 aa13.77□□□□□ -0.21
DCTN3-204ENST00000378913 TMC1Q8TDI8 760 aa13.77□□□□□ -0.21
DCTN3-204ENST00000378913 LMO7Q8WWI1 1683 aa13.76□□□□□ -0.21
DCTN3-204ENST00000378913 CDK12Q9NYV4 1490 aaPredicted RBP13.76□□□□□ -0.21
DCTN3-204ENST00000378913 EDC4Q6P2E9 1401 aaKnown RBP13.76□□□□□ -0.21
DCTN3-204ENST00000378913 TTC21AQ8NDW8 1320 aa13.76□□□□□ -0.21
DCTN3-204ENST00000378913 EIF4G2P78344 907 aaKnown RBP eCLIP13.76□□□□□ -0.21
DCTN3-204ENST00000378913 FAM83GA6ND36 823 aa13.75□□□□□ -0.21
DCTN3-204ENST00000378913 HSPA5P11021 654 aaKnown RBP13.75□□□□□ -0.21
DCTN3-204ENST00000378913 HDGFL2Q7Z4V5 671 aaPredicted RBP13.75□□□□□ -0.21
DCTN3-204ENST00000378913 NLRP13Q86W25 1043 aa13.75□□□□□ -0.21
DCTN3-204ENST00000378913 QTRT2Q9H974 415 aaKnown RBP13.75□□□□□ -0.21
DCTN3-204ENST00000378913 KIF20BQ96Q89 1820 aa13.75□□□□□ -0.21
DCTN3-204ENST00000378913 GLI3P10071 1580 aa13.75□□□□□ -0.21
DCTN3-204ENST00000378913 KIAA0232Q92628 1395 aa13.74□□□□□ -0.21
DCTN3-204ENST00000378913 LTN1O94822 1766 aa13.74□□□□□ -0.21
DCTN3-204ENST00000378913 RGPD5Q99666 1765 aa13.74□□□□□ -0.21
DCTN3-204ENST00000378913 CDCA8Q53HL2 280 aa13.74□□□□□ -0.21
DCTN3-204ENST00000378913 TERF2IPQ9NYB0 399 aa13.74□□□□□ -0.21
DCTN3-204ENST00000378913 TRPC5Q9UL62 973 aaPredicted RBP13.74□□□□□ -0.21
DCTN3-204ENST00000378913 COL18A1P39060 1754 aa13.73□□□□□ -0.21
DCTN3-204ENST00000378913 ANKRD36BQ8N2N9 1353 aa13.73□□□□□ -0.21
DCTN3-204ENST00000378913 RXRBP28702 533 aa13.73□□□□□ -0.21
DCTN3-204ENST00000378913 NLRP6P59044 892 aa13.73□□□□□ -0.21
DCTN3-204ENST00000378913 UNC5CLQ8IV45 518 aa13.73□□□□□ -0.21
DCTN3-204ENST00000378913 NFAT5O94916 1531 aa13.73□□□□□ -0.21
DCTN3-204ENST00000378913 RGS12O14924 1447 aa13.73□□□□□ -0.21
DCTN3-204ENST00000378913 CPDO75976 1380 aa13.72□□□□□ -0.21
DCTN3-204ENST00000378913 BRWD3Q6RI45 1802 aa13.72□□□□□ -0.21
DCTN3-204ENST00000378913 RBM6P78332 1123 aaKnown RBP13.72□□□□□ -0.21
DCTN3-204ENST00000378913 PRDM11Q9NQV5 511 aa13.72□□□□□ -0.21
DCTN3-204ENST00000378913 GCP02774 474 aa13.71□□□□□ -0.21
DCTN3-204ENST00000378913 ZC3H6P61129 1189 aaKnown RBP13.71□□□□□ -0.21
DCTN3-204ENST00000378913 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.71□□□□□ -0.21
DCTN3-204ENST00000378913 USP31Q70CQ4 1352 aa13.71□□□□□ -0.22
DCTN3-204ENST00000378913 CAMTA1Q9Y6Y1 1673 aa13.7□□□□□ -0.22
DCTN3-204ENST00000378913 BTG4Q9NY30 223 aa13.7□□□□□ -0.22
DCTN3-204ENST00000378913 OVOS2A0A0J9YW53 1432 aa13.7□□□□□ -0.22
DCTN3-204ENST00000378913 OVOS2Q6IE36 1432 aa13.7□□□□□ -0.22
DCTN3-204ENST00000378913 EP400Q96L91 3159 aa13.7□□□□□ -0.22
DCTN3-204ENST00000378913 CHRNA2Q15822 529 aa13.69□□□□□ -0.22
DCTN3-204ENST00000378913 NME9Q86XW9 330 aa13.69□□□□□ -0.22
DCTN3-204ENST00000378913 VPS72Q15906 364 aa13.68□□□□□ -0.22
DCTN3-204ENST00000378913 GJD4Q96KN9 370 aaPredicted RBP13.68□□□□□ -0.22
DCTN3-204ENST00000378913 ZRANB1Q9UGI0 708 aa13.68□□□□□ -0.22
DCTN3-204ENST00000378913 ABCC6O95255 1503 aa13.68□□□□□ -0.22
DCTN3-204ENST00000378913 ANKRD26Q9UPS8 1709 aa13.67□□□□□ -0.22
DCTN3-204ENST00000378913 WNK3Q9BYP7 1800 aa13.67□□□□□ -0.22
DCTN3-204ENST00000378913 KCNH5Q8NCM2 988 aa13.66□□□□□ -0.22
DCTN3-204ENST00000378913 AATKQ6ZMQ8 1374 aa13.66□□□□□ -0.22
DCTN3-204ENST00000378913 COL5A2P05997 1499 aaPredicted RBP13.66□□□□□ -0.22
DCTN3-204ENST00000378913 THSD7AQ9UPZ6 1657 aa13.66□□□□□ -0.22
DCTN3-204ENST00000378913 NSD3Q9BZ95 1437 aa13.64□□□□□ -0.23
DCTN3-204ENST00000378913 C11orf95C9JLR9 678 aaPredicted RBP13.64□□□□□ -0.23
DCTN3-204ENST00000378913 SOX12O15370 315 aa13.64□□□□□ -0.23
DCTN3-204ENST00000378913 ARHGEF25Q86VW2 580 aa13.64□□□□□ -0.23
DCTN3-204ENST00000378913 POLR3GLQ9BT43 218 aa13.64□□□□□ -0.23
DCTN3-204ENST00000378913 CCDC9Q9Y3X0 531 aaKnown RBP13.64□□□□□ -0.23
DCTN3-204ENST00000378913 SPATA31A5Q5VU36 1347 aa13.64□□□□□ -0.23
DCTN3-204ENST00000378913 SPATA31A7Q8IWB4 1347 aa13.64□□□□□ -0.23
DCTN3-204ENST00000378913 ZBTB7CA1YPR0 619 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms