RNA–Protein interactions for RNA: ENST00000378887.3

SDHAF1-201, Transcript of succinate dehydrogenase complex assembly factor 1, humanhuman

APPRIS P1 BASIC

Gene SDHAF1, Length 1,117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF1-201ENST00000378887 USP6P35125 1406 aa33.62■■■□□ 2.97
SDHAF1-201ENST00000378887 FNBP4Q8N3X1 1017 aaPredicted RBP33.62■■■□□ 2.97
SDHAF1-201ENST00000378887 CABLES1Q8TDN4 633 aa33.62■■■□□ 2.97
SDHAF1-201ENST00000378887 BCL9LQ86UU0 1499 aa33.62■■■□□ 2.97
SDHAF1-201ENST00000378887 SLIT2O94813 1529 aa33.61■■■□□ 2.97
SDHAF1-201ENST00000378887 MON2Q7Z3U7 1717 aa33.61■■■□□ 2.97
SDHAF1-201ENST00000378887 MEX3CQ5U5Q3 659 aaKnown RBP33.6■■■□□ 2.97
SDHAF1-201ENST00000378887 ATAD2Q6PL18 1390 aa33.6■■■□□ 2.97
SDHAF1-201ENST00000378887 C8orf37Q96NL8 207 aa33.59■■■□□ 2.97
SDHAF1-201ENST00000378887 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.59■■■□□ 2.97
SDHAF1-201ENST00000378887 PIK3C2AO00443 1686 aa33.58■■■□□ 2.97
SDHAF1-201ENST00000378887 PLCH1Q4KWH8 1693 aa33.56■■■□□ 2.96
SDHAF1-201ENST00000378887 PUS7Q96PZ0 661 aaKnown RBP33.55■■■□□ 2.96
SDHAF1-201ENST00000378887 BRD4O60885 1362 aaPredicted RBP33.54■■■□□ 2.96
SDHAF1-201ENST00000378887 ZNF772Q68DY9 489 aaPredicted RBP33.53■■■□□ 2.96
SDHAF1-201ENST00000378887 ATRNO75882 1429 aa33.53■■■□□ 2.96
SDHAF1-201ENST00000378887 USP19O94966 1318 aa33.53■■■□□ 2.96
SDHAF1-201ENST00000378887 NRAPQ86VF7 1730 aa33.52■■■□□ 2.96
SDHAF1-201ENST00000378887 NWD2Q9ULI1 1742 aa33.51■■■□□ 2.96
SDHAF1-201ENST00000378887 USP54Q70EL1 1684 aa33.48■■■□□ 2.95
SDHAF1-201ENST00000378887 NGLY1Q96IV0 654 aa33.48■■■□□ 2.95
SDHAF1-201ENST00000378887 SLIT3O75094 1523 aa33.48■■■□□ 2.95
SDHAF1-201ENST00000378887 LMOD2Q6P5Q4 547 aa33.47■■■□□ 2.95
SDHAF1-201ENST00000378887 MYOM1P52179 1685 aa33.46■■■□□ 2.95
SDHAF1-201ENST00000378887 CDK12Q9NYV4 1490 aaPredicted RBP33.45■■■□□ 2.95
SDHAF1-201ENST00000378887 COL14A1Q05707 1796 aaKnown RBP33.45■■■□□ 2.95
SDHAF1-201ENST00000378887 SOCS7O14512 581 aa33.45■■■□□ 2.95
SDHAF1-201ENST00000378887 PAK3O75914 559 aaPredicted RBP33.45■■■□□ 2.95
SDHAF1-201ENST00000378887 SLC12A5Q9H2X9 1139 aa33.44■■■□□ 2.94
SDHAF1-201ENST00000378887 FAM83GA6ND36 823 aa33.43■■■□□ 2.94
SDHAF1-201ENST00000378887 GLI3P10071 1580 aa33.43■■■□□ 2.94
SDHAF1-201ENST00000378887 USP21Q9UK80 565 aa33.42■■■□□ 2.94
SDHAF1-201ENST00000378887 LMO7Q8WWI1 1683 aa33.42■■■□□ 2.94
SDHAF1-201ENST00000378887 NUTM2GQ5VZR2 741 aa33.41■■■□□ 2.94
SDHAF1-201ENST00000378887 TTC21BQ7Z4L5 1316 aa33.41■■■□□ 2.94
SDHAF1-201ENST00000378887 A0A1W2PP64 1363 aa33.41■■■□□ 2.94
SDHAF1-201ENST00000378887 RGS12O14924 1447 aa33.39■■■□□ 2.94
SDHAF1-201ENST00000378887 QTRT2Q9H974 415 aaKnown RBP33.39■■■□□ 2.94
SDHAF1-201ENST00000378887 PLEKHG5O94827 1062 aa33.38■■■□□ 2.93
SDHAF1-201ENST00000378887 ZNF692Q9BU19 519 aaPredicted RBP33.38■■■□□ 2.93
SDHAF1-201ENST00000378887 ABTB2Q8N961 1025 aa33.37■■■□□ 2.93
SDHAF1-201ENST00000378887 KTN1Q86UP2 1357 aaKnown RBP33.36■■■□□ 2.93
SDHAF1-201ENST00000378887 CPDO75976 1380 aa33.35■■■□□ 2.93
SDHAF1-201ENST00000378887 KIAA0232Q92628 1395 aa33.35■■■□□ 2.93
SDHAF1-201ENST00000378887 NINLQ9Y2I6 1382 aa33.35■■■□□ 2.93
SDHAF1-201ENST00000378887 COL18A1P39060 1754 aa33.34■■■□□ 2.93
SDHAF1-201ENST00000378887 NFAT5O94916 1531 aa33.34■■■□□ 2.93
SDHAF1-201ENST00000378887 UNC5CLQ8IV45 518 aa33.34■■■□□ 2.93
SDHAF1-201ENST00000378887 RXRBP28702 533 aa33.32■■■□□ 2.92
SDHAF1-201ENST00000378887 RBM6P78332 1123 aaKnown RBP33.32■■■□□ 2.92
SDHAF1-201ENST00000378887 EDC4Q6P2E9 1401 aaKnown RBP33.32■■■□□ 2.92
SDHAF1-201ENST00000378887 TRPC5Q9UL62 973 aaPredicted RBP33.32■■■□□ 2.92
SDHAF1-201ENST00000378887 USP31Q70CQ4 1352 aa33.32■■■□□ 2.92
SDHAF1-201ENST00000378887 TTC21AQ8NDW8 1320 aa33.31■■■□□ 2.92
SDHAF1-201ENST00000378887 SLC24A1O60721 1099 aa33.31■■■□□ 2.92
SDHAF1-201ENST00000378887 CAMTA1Q9Y6Y1 1673 aa33.3■■■□□ 2.92
SDHAF1-201ENST00000378887 TMF1P82094 1093 aa33.3■■■□□ 2.92
SDHAF1-201ENST00000378887 HSPA5P11021 654 aaKnown RBP33.29■■■□□ 2.92
SDHAF1-201ENST00000378887 GCP02774 474 aa33.28■■■□□ 2.92
SDHAF1-201ENST00000378887 ZRANB1Q9UGI0 708 aa33.28■■■□□ 2.92
SDHAF1-201ENST00000378887 EP400Q96L91 3159 aa33.28■■■□□ 2.92
SDHAF1-201ENST00000378887 ANKRD36BQ8N2N9 1353 aa33.27■■■□□ 2.92
SDHAF1-201ENST00000378887 NLRP13Q86W25 1043 aa33.27■■■□□ 2.92
SDHAF1-201ENST00000378887 OVOS2A0A0J9YW53 1432 aa33.27■■■□□ 2.92
SDHAF1-201ENST00000378887 OVOS2Q6IE36 1432 aa33.27■■■□□ 2.92
SDHAF1-201ENST00000378887 HAP1P54257 671 aaPredicted RBP33.26■■■□□ 2.91
SDHAF1-201ENST00000378887 TMC1Q8TDI8 760 aa33.26■■■□□ 2.91
SDHAF1-201ENST00000378887 VPS72Q15906 364 aa33.25■■■□□ 2.91
SDHAF1-201ENST00000378887 NLRP6P59044 892 aa33.24■■■□□ 2.91
SDHAF1-201ENST00000378887 GJD4Q96KN9 370 aaPredicted RBP33.24■■■□□ 2.91
SDHAF1-201ENST00000378887 ZC3H6P61129 1189 aaKnown RBP33.23■■■□□ 2.91
SDHAF1-201ENST00000378887 CHRNA2Q15822 529 aa33.23■■■□□ 2.91
SDHAF1-201ENST00000378887 NME9Q86XW9 330 aa33.23■■■□□ 2.91
SDHAF1-201ENST00000378887 BTG4Q9NY30 223 aa33.23■■■□□ 2.91
SDHAF1-201ENST00000378887 EIF4G2P78344 907 aaKnown RBP eCLIP33.21■■■□□ 2.91
SDHAF1-201ENST00000378887 PRDM11Q9NQV5 511 aa33.21■■■□□ 2.91
SDHAF1-201ENST00000378887 C11orf95C9JLR9 678 aaPredicted RBP33.2■■■□□ 2.91
SDHAF1-201ENST00000378887 TERF2IPQ9NYB0 399 aa33.2■■■□□ 2.91
SDHAF1-201ENST00000378887 HDGFL2Q7Z4V5 671 aaPredicted RBP33.18■■■□□ 2.9
SDHAF1-201ENST00000378887 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.18■■■□□ 2.9
SDHAF1-201ENST00000378887 BRWD3Q6RI45 1802 aa33.18■■■□□ 2.9
SDHAF1-201ENST00000378887 THSD7AQ9UPZ6 1657 aa33.17■■■□□ 2.9
SDHAF1-201ENST00000378887 ONECUT3O60422 494 aaPredicted RBP33.17■■■□□ 2.9
SDHAF1-201ENST00000378887 AATKQ6ZMQ8 1374 aa33.16■■■□□ 2.9
SDHAF1-201ENST00000378887 COL5A2P05997 1499 aaPredicted RBP33.16■■■□□ 2.9
SDHAF1-201ENST00000378887 ARHGEF25Q86VW2 580 aa33.15■■■□□ 2.9
SDHAF1-201ENST00000378887 CARD14Q9BXL6 1004 aa33.15■■■□□ 2.9
SDHAF1-201ENST00000378887 RGPD5Q99666 1765 aa33.14■■■□□ 2.9
SDHAF1-201ENST00000378887 SPATA31A5Q5VU36 1347 aa33.14■■■□□ 2.9
SDHAF1-201ENST00000378887 SPATA31A7Q8IWB4 1347 aa33.14■■■□□ 2.9
SDHAF1-201ENST00000378887 ABCC6O95255 1503 aa33.13■■■□□ 2.89
SDHAF1-201ENST00000378887 CDCA8Q53HL2 280 aa33.12■■■□□ 2.89
SDHAF1-201ENST00000378887 LTN1O94822 1766 aa33.11■■■□□ 2.89
SDHAF1-201ENST00000378887 AXIN2Q9Y2T1 843 aa33.1■■■□□ 2.89
SDHAF1-201ENST00000378887 KIF20BQ96Q89 1820 aa33.09■■■□□ 2.89
SDHAF1-201ENST00000378887 SPATA31A1Q5TZJ5 1347 aa33.07■■■□□ 2.88
SDHAF1-201ENST00000378887 FYB1O15117 783 aa33.05■■■□□ 2.88
SDHAF1-201ENST00000378887 KCNH5Q8NCM2 988 aa33.05■■■□□ 2.88
SDHAF1-201ENST00000378887 LARP1Q6PKG0 1096 aaKnown RBP33.03■■■□□ 2.88
SDHAF1-201ENST00000378887 NSD3Q9BZ95 1437 aa33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms