RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 VPS72Q15906 364 aa27.26■■□□□ 1.95
TMEM88B-201ENST00000378821 TRPM1Q7Z4N2 1603 aa27.26■■□□□ 1.95
TMEM88B-201ENST00000378821 CENPJQ9HC77 1338 aaPredicted RBP27.24■■□□□ 1.95
TMEM88B-201ENST00000378821 ONECUT3O60422 494 aaPredicted RBP27.23■■□□□ 1.95
TMEM88B-201ENST00000378821 NRAPQ86VF7 1730 aa27.23■■□□□ 1.95
TMEM88B-201ENST00000378821 COL14A1Q05707 1796 aaKnown RBP27.22■■□□□ 1.95
TMEM88B-201ENST00000378821 ACEP12821 1306 aa27.21■■□□□ 1.95
TMEM88B-201ENST00000378821 QRICH2Q9H0J4 1663 aa27.21■■□□□ 1.95
TMEM88B-201ENST00000378821 NBPF8Q3BBV2 869 aa27.21■■□□□ 1.95
TMEM88B-201ENST00000378821 EP400Q96L91 3159 aa27.19■■□□□ 1.94
TMEM88B-201ENST00000378821 PAK3O75914 559 aaPredicted RBP27.18■■□□□ 1.94
TMEM88B-201ENST00000378821 PLEKHG5O94827 1062 aa27.18■■□□□ 1.94
TMEM88B-201ENST00000378821 PCGF6Q9BYE7 350 aa27.18■■□□□ 1.94
TMEM88B-201ENST00000378821 NEUROD1Q13562 356 aa27.17■■□□□ 1.94
TMEM88B-201ENST00000378821 BRWD3Q6RI45 1802 aa27.17■■□□□ 1.94
TMEM88B-201ENST00000378821 CCDC125Q86Z20 511 aa27.16■■□□□ 1.94
TMEM88B-201ENST00000378821 PHRF1Q9P1Y6 1649 aaKnown RBP27.15■■□□□ 1.94
TMEM88B-201ENST00000378821 BTG4Q9NY30 223 aa27.14■■□□□ 1.94
TMEM88B-201ENST00000378821 PPIP5K1Q6PFW1 1433 aa27.14■■□□□ 1.93
TMEM88B-201ENST00000378821 SRPK2P78362 688 aaKnown RBP27.13■■□□□ 1.93
TMEM88B-201ENST00000378821 BRD4O60885 1362 aaPredicted RBP27.12■■□□□ 1.93
TMEM88B-201ENST00000378821 SEPT12Q8IYM1 358 aa27.12■■□□□ 1.93
TMEM88B-201ENST00000378821 CABP2Q9NPB3 220 aa27.12■■□□□ 1.93
TMEM88B-201ENST00000378821 ROCK2O75116 1388 aaKnown RBP27.1■■□□□ 1.93
TMEM88B-201ENST00000378821 PRDM11Q9NQV5 511 aa27.08■■□□□ 1.93
TMEM88B-201ENST00000378821 USP19O94966 1318 aa27.08■■□□□ 1.93
TMEM88B-201ENST00000378821 KIAA0232Q92628 1395 aa27.08■■□□□ 1.93
TMEM88B-201ENST00000378821 CCDC9Q9Y3X0 531 aaKnown RBP27.07■■□□□ 1.92
TMEM88B-201ENST00000378821 SPATA31A5Q5VU36 1347 aa27.07■■□□□ 1.92
TMEM88B-201ENST00000378821 EVC2Q86UK5 1308 aa27.07■■□□□ 1.92
TMEM88B-201ENST00000378821 SPATA31A7Q8IWB4 1347 aa27.07■■□□□ 1.92
TMEM88B-201ENST00000378821 NRKQ7Z2Y5 1582 aa27.05■■□□□ 1.92
TMEM88B-201ENST00000378821 ABTB2Q8N961 1025 aa27.05■■□□□ 1.92
TMEM88B-201ENST00000378821 CABP1Q9NZU7 370 aa27.05■■□□□ 1.92
TMEM88B-201ENST00000378821 CPDO75976 1380 aa27.04■■□□□ 1.92
TMEM88B-201ENST00000378821 BLMP54132 1417 aaPredicted RBP27.04■■□□□ 1.92
TMEM88B-201ENST00000378821 SSH2Q76I76 1423 aa27.04■■□□□ 1.92
TMEM88B-201ENST00000378821 USP6P35125 1406 aa27.03■■□□□ 1.92
TMEM88B-201ENST00000378821 NUTM2GQ5VZR2 741 aa27.03■■□□□ 1.92
TMEM88B-201ENST00000378821 SBNO2Q9Y2G9 1366 aa27.02■■□□□ 1.92
TMEM88B-201ENST00000378821 KRT27Q7Z3Y8 459 aa27.02■■□□□ 1.92
TMEM88B-201ENST00000378821 NLRP13Q86W25 1043 aa27.01■■□□□ 1.91
TMEM88B-201ENST00000378821 THSD7AQ9UPZ6 1657 aa27.01■■□□□ 1.91
TMEM88B-201ENST00000378821 ZC3H6P61129 1189 aaKnown RBP27■■□□□ 1.91
TMEM88B-201ENST00000378821 FAM98CQ17RN3 349 aaKnown RBP27■■□□□ 1.91
TMEM88B-201ENST00000378821 LMO7Q8WWI1 1683 aa27■■□□□ 1.91
TMEM88B-201ENST00000378821 CHRNA2Q15822 529 aa26.99■■□□□ 1.91
TMEM88B-201ENST00000378821 SPATA31A1Q5TZJ5 1347 aa26.98■■□□□ 1.91
TMEM88B-201ENST00000378821 GCP02774 474 aa26.97■■□□□ 1.91
TMEM88B-201ENST00000378821 CAMTA1Q9Y6Y1 1673 aa26.97■■□□□ 1.91
TMEM88B-201ENST00000378821 AKAP12Q02952 1782 aa26.97■■□□□ 1.91
TMEM88B-201ENST00000378821 ZNF692Q9BU19 519 aaPredicted RBP26.95■■□□□ 1.9
TMEM88B-201ENST00000378821 TONSLQ96HA7 1378 aa26.95■■□□□ 1.9
TMEM88B-201ENST00000378821 SLIT3O75094 1523 aa26.95■■□□□ 1.9
TMEM88B-201ENST00000378821 CPSF1Q10570 1443 aaKnown RBP26.94■■□□□ 1.9
TMEM88B-201ENST00000378821 PIK3C2AO00443 1686 aa26.94■■□□□ 1.9
TMEM88B-201ENST00000378821 CARD11Q9BXL7 1154 aa26.92■■□□□ 1.9
TMEM88B-201ENST00000378821 NLRP6P59044 892 aa26.9■■□□□ 1.9
TMEM88B-201ENST00000378821 BARGINQ6ZT62 677 aa26.9■■□□□ 1.9
TMEM88B-201ENST00000378821 STRN4Q9NRL3 753 aa26.9■■□□□ 1.9
TMEM88B-201ENST00000378821 A0A0G2JS52 829 aa26.88■■□□□ 1.89
TMEM88B-201ENST00000378821 MYT1Q01538 1121 aa26.88■■□□□ 1.89
TMEM88B-201ENST00000378821 ZRANB1Q9UGI0 708 aa26.88■■□□□ 1.89
TMEM88B-201ENST00000378821 TTC21BQ7Z4L5 1316 aa26.88■■□□□ 1.89
TMEM88B-201ENST00000378821 AATKQ6ZMQ8 1374 aa26.87■■□□□ 1.89
TMEM88B-201ENST00000378821 EVA1CP58658 441 aa26.87■■□□□ 1.89
TMEM88B-201ENST00000378821 TTC21AQ8NDW8 1320 aa26.87■■□□□ 1.89
TMEM88B-201ENST00000378821 COL5A2P05997 1499 aaPredicted RBP26.87■■□□□ 1.89
TMEM88B-201ENST00000378821 COL18A1P39060 1754 aa26.86■■□□□ 1.89
TMEM88B-201ENST00000378821 LARP1Q6PKG0 1096 aaKnown RBP26.86■■□□□ 1.89
TMEM88B-201ENST00000378821 MON2Q7Z3U7 1717 aa26.86■■□□□ 1.89
TMEM88B-201ENST00000378821 DEFB132Q7Z7B7 95 aa26.86■■□□□ 1.89
TMEM88B-201ENST00000378821 SF3B2Q13435 895 aaKnown RBP26.85■■□□□ 1.89
TMEM88B-201ENST00000378821 PUS7Q96PZ0 661 aaKnown RBP26.85■■□□□ 1.89
TMEM88B-201ENST00000378821 THRAP3Q9Y2W1 955 aaKnown RBP26.84■■□□□ 1.89
TMEM88B-201ENST00000378821 RGPD1P0DJD0 1748 aa26.83■■□□□ 1.89
TMEM88B-201ENST00000378821 CD163L1Q9NR16 1453 aa26.82■■□□□ 1.88
TMEM88B-201ENST00000378821 TCP11L2Q8N4U5 519 aa26.82■■□□□ 1.88
TMEM88B-201ENST00000378821 KTN1Q86UP2 1357 aaKnown RBP26.82■■□□□ 1.88
TMEM88B-201ENST00000378821 CLSPNQ9HAW4 1339 aa26.81■■□□□ 1.88
TMEM88B-201ENST00000378821 USP54Q70EL1 1684 aa26.8■■□□□ 1.88
TMEM88B-201ENST00000378821 FAM182BQ5T319 152 aa26.79■■□□□ 1.88
TMEM88B-201ENST00000378821 ARHGEF25Q86VW2 580 aa26.79■■□□□ 1.88
TMEM88B-201ENST00000378821 KCNH5Q8NCM2 988 aa26.79■■□□□ 1.88
TMEM88B-201ENST00000378821 USP35Q9P2H5 1018 aa26.79■■□□□ 1.88
TMEM88B-201ENST00000378821 DISP2A7MBM2 1401 aa26.79■■□□□ 1.88
TMEM88B-201ENST00000378821 CRB1P82279 1406 aa26.79■■□□□ 1.88
TMEM88B-201ENST00000378821 TNS1Q9HBL0 1735 aaKnown RBP26.79■■□□□ 1.88
TMEM88B-201ENST00000378821 PARP4Q9UKK3 1724 aaKnown RBP26.78■■□□□ 1.88
TMEM88B-201ENST00000378821 NFAT5O94916 1531 aa26.77■■□□□ 1.88
TMEM88B-201ENST00000378821 USP31Q70CQ4 1352 aa26.77■■□□□ 1.88
TMEM88B-201ENST00000378821 BAG6P46379 1132 aa26.77■■□□□ 1.88
TMEM88B-201ENST00000378821 FAM196AQ6ZSG2 479 aa26.77■■□□□ 1.88
TMEM88B-201ENST00000378821 TESK2Q96S53 571 aa26.77■■□□□ 1.88
TMEM88B-201ENST00000378821 AXIN2Q9Y2T1 843 aa26.76■■□□□ 1.87
TMEM88B-201ENST00000378821 ABCC6O95255 1503 aa26.74■■□□□ 1.87
TMEM88B-201ENST00000378821 CCER1Q8TC90 406 aaPredicted RBP26.73■■□□□ 1.87
TMEM88B-201ENST00000378821 SLC12A5Q9H2X9 1139 aa26.73■■□□□ 1.87
TMEM88B-201ENST00000378821 SRCAPQ6ZRS2 3230 aa26.72■■□□□ 1.87
TMEM88B-201ENST00000378821 RGPD5Q99666 1765 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms