RNA–Protein interactions for RNA: ENST00000378543.2

FAAP20-201, Transcript of FA core complex associated protein 20, humanhuman

TSL 2

Gene FAAP20, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-201ENST00000378543 ACEP12821 1306 aa33.72■■■□□ 2.99
FAAP20-201ENST00000378543 POLR3AO14802 1390 aaPredicted RBP33.72■■■□□ 2.99
FAAP20-201ENST00000378543 GLI3P10071 1580 aa33.71■■■□□ 2.99
FAAP20-201ENST00000378543 PLEKHG3A1L390 1219 aa33.7■■■□□ 2.99
FAAP20-201ENST00000378543 FAM83GA6ND36 823 aa33.7■■■□□ 2.99
FAAP20-201ENST00000378543 SRPK2P78362 688 aaKnown RBP33.7■■■□□ 2.99
FAAP20-201ENST00000378543 NBPF8Q3BBV2 869 aa33.69■■■□□ 2.98
FAAP20-201ENST00000378543 CABP2Q9NPB3 220 aa33.69■■■□□ 2.98
FAAP20-201ENST00000378543 ROCK2O75116 1388 aaKnown RBP33.69■■■□□ 2.98
FAAP20-201ENST00000378543 RALGAPBQ86X10 1494 aa33.69■■■□□ 2.98
FAAP20-201ENST00000378543 PPIP5K1Q6PFW1 1433 aa33.64■■■□□ 2.98
FAAP20-201ENST00000378543 VPS72Q15906 364 aa33.64■■■□□ 2.98
FAAP20-201ENST00000378543 ATAD2Q6PL18 1390 aa33.63■■■□□ 2.97
FAAP20-201ENST00000378543 COL14A1Q05707 1796 aaKnown RBP33.62■■■□□ 2.97
FAAP20-201ENST00000378543 NRAPQ86VF7 1730 aa33.62■■■□□ 2.97
FAAP20-201ENST00000378543 NUTM2GQ5VZR2 741 aa33.6■■■□□ 2.97
FAAP20-201ENST00000378543 PHRF1Q9P1Y6 1649 aaKnown RBP33.6■■■□□ 2.97
FAAP20-201ENST00000378543 BTG4Q9NY30 223 aa33.58■■■□□ 2.97
FAAP20-201ENST00000378543 CCDC9Q9Y3X0 531 aaKnown RBP33.58■■■□□ 2.97
FAAP20-201ENST00000378543 TONSLQ96HA7 1378 aa33.58■■■□□ 2.97
FAAP20-201ENST00000378543 EVC2Q86UK5 1308 aa33.56■■■□□ 2.96
FAAP20-201ENST00000378543 BRWD3Q6RI45 1802 aa33.56■■■□□ 2.96
FAAP20-201ENST00000378543 CABP1Q9NZU7 370 aa33.55■■■□□ 2.96
FAAP20-201ENST00000378543 ABTB2Q8N961 1025 aa33.53■■■□□ 2.96
FAAP20-201ENST00000378543 PRDM11Q9NQV5 511 aa33.53■■■□□ 2.96
FAAP20-201ENST00000378543 KIAA0232Q92628 1395 aa33.52■■■□□ 2.96
FAAP20-201ENST00000378543 SEPT12Q8IYM1 358 aa33.51■■■□□ 2.95
FAAP20-201ENST00000378543 CARD11Q9BXL7 1154 aa33.5■■■□□ 2.95
FAAP20-201ENST00000378543 ONECUT3O60422 494 aaPredicted RBP33.49■■■□□ 2.95
FAAP20-201ENST00000378543 ZC3H6P61129 1189 aaKnown RBP33.49■■■□□ 2.95
FAAP20-201ENST00000378543 CHRNA2Q15822 529 aa33.48■■■□□ 2.95
FAAP20-201ENST00000378543 USP6P35125 1406 aa33.47■■■□□ 2.95
FAAP20-201ENST00000378543 NRKQ7Z2Y5 1582 aa33.47■■■□□ 2.95
FAAP20-201ENST00000378543 BRD4O60885 1362 aaPredicted RBP33.47■■■□□ 2.95
FAAP20-201ENST00000378543 USP19O94966 1318 aa33.45■■■□□ 2.95
FAAP20-201ENST00000378543 NLRP13Q86W25 1043 aa33.43■■■□□ 2.94
FAAP20-201ENST00000378543 FAM98CQ17RN3 349 aaKnown RBP33.42■■■□□ 2.94
FAAP20-201ENST00000378543 SPATA31A5Q5VU36 1347 aa33.41■■■□□ 2.94
FAAP20-201ENST00000378543 SPATA31A7Q8IWB4 1347 aa33.41■■■□□ 2.94
FAAP20-201ENST00000378543 SBNO2Q9Y2G9 1366 aa33.41■■■□□ 2.94
FAAP20-201ENST00000378543 SSH2Q76I76 1423 aa33.41■■■□□ 2.94
FAAP20-201ENST00000378543 EP400Q96L91 3159 aa33.4■■■□□ 2.94
FAAP20-201ENST00000378543 AKAP12Q02952 1782 aa33.4■■■□□ 2.94
FAAP20-201ENST00000378543 CLSPNQ9HAW4 1339 aa33.39■■■□□ 2.94
FAAP20-201ENST00000378543 A0A0G2JS52 829 aa33.38■■■□□ 2.93
FAAP20-201ENST00000378543 GCP02774 474 aa33.38■■■□□ 2.93
FAAP20-201ENST00000378543 MYT1Q01538 1121 aa33.38■■■□□ 2.93
FAAP20-201ENST00000378543 CCDC125Q86Z20 511 aa33.37■■■□□ 2.93
FAAP20-201ENST00000378543 STRN4Q9NRL3 753 aa33.37■■■□□ 2.93
FAAP20-201ENST00000378543 CPDO75976 1380 aa33.36■■■□□ 2.93
FAAP20-201ENST00000378543 PIK3C2AO00443 1686 aa33.36■■■□□ 2.93
FAAP20-201ENST00000378543 NLRP6P59044 892 aa33.36■■■□□ 2.93
FAAP20-201ENST00000378543 KRT27Q7Z3Y8 459 aa33.36■■■□□ 2.93
FAAP20-201ENST00000378543 ZNF692Q9BU19 519 aaPredicted RBP33.35■■■□□ 2.93
FAAP20-201ENST00000378543 PCGF6Q9BYE7 350 aa33.35■■■□□ 2.93
FAAP20-201ENST00000378543 LMO7Q8WWI1 1683 aa33.35■■■□□ 2.93
FAAP20-201ENST00000378543 CAMTA1Q9Y6Y1 1673 aa33.34■■■□□ 2.93
FAAP20-201ENST00000378543 SPATA31A1Q5TZJ5 1347 aa33.32■■■□□ 2.93
FAAP20-201ENST00000378543 CPSF1Q10570 1443 aaKnown RBP33.32■■■□□ 2.92
FAAP20-201ENST00000378543 SLIT3O75094 1523 aa33.32■■■□□ 2.92
FAAP20-201ENST00000378543 TTC21BQ7Z4L5 1316 aa33.31■■■□□ 2.92
FAAP20-201ENST00000378543 THSD7AQ9UPZ6 1657 aa33.31■■■□□ 2.92
FAAP20-201ENST00000378543 BLMP54132 1417 aaPredicted RBP33.3■■■□□ 2.92
FAAP20-201ENST00000378543 EVA1CP58658 441 aa33.3■■■□□ 2.92
FAAP20-201ENST00000378543 TIMELESSQ9UNS1 1208 aa33.28■■■□□ 2.92
FAAP20-201ENST00000378543 MON2Q7Z3U7 1717 aa33.28■■■□□ 2.92
FAAP20-201ENST00000378543 KTN1Q86UP2 1357 aaKnown RBP33.27■■■□□ 2.92
FAAP20-201ENST00000378543 LARP1Q6PKG0 1096 aaKnown RBP33.25■■■□□ 2.91
FAAP20-201ENST00000378543 TTC21AQ8NDW8 1320 aa33.25■■■□□ 2.91
FAAP20-201ENST00000378543 ZBTB7CA1YPR0 619 aa33.24■■■□□ 2.91
FAAP20-201ENST00000378543 USP35Q9P2H5 1018 aa33.24■■■□□ 2.91
FAAP20-201ENST00000378543 TMC1Q8TDI8 760 aa33.22■■■□□ 2.91
FAAP20-201ENST00000378543 CD163L1Q9NR16 1453 aa33.22■■■□□ 2.91
FAAP20-201ENST00000378543 COL5A2P05997 1499 aaPredicted RBP33.21■■■□□ 2.91
FAAP20-201ENST00000378543 ST20-MTHFSA0A0A6YYL1 179 aa33.21■■■□□ 2.91
FAAP20-201ENST00000378543 FAM182BQ5T319 152 aa33.21■■■□□ 2.91
FAAP20-201ENST00000378543 COL18A1P39060 1754 aa33.2■■■□□ 2.91
FAAP20-201ENST00000378543 DEFB132Q7Z7B7 95 aa33.2■■■□□ 2.91
FAAP20-201ENST00000378543 TESK2Q96S53 571 aa33.2■■■□□ 2.91
FAAP20-201ENST00000378543 SLC12A5Q9H2X9 1139 aa33.2■■■□□ 2.91
FAAP20-201ENST00000378543 AATKQ6ZMQ8 1374 aa33.19■■■□□ 2.9
FAAP20-201ENST00000378543 SF3B2Q13435 895 aaKnown RBP33.18■■■□□ 2.9
FAAP20-201ENST00000378543 BARGINQ6ZT62 677 aa33.17■■■□□ 2.9
FAAP20-201ENST00000378543 PUS7Q96PZ0 661 aaKnown RBP33.17■■■□□ 2.9
FAAP20-201ENST00000378543 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.16■■■□□ 2.9
FAAP20-201ENST00000378543 SOX12O15370 315 aa33.15■■■□□ 2.9
FAAP20-201ENST00000378543 TCP11L2Q8N4U5 519 aa33.15■■■□□ 2.9
FAAP20-201ENST00000378543 KCNH5Q8NCM2 988 aa33.15■■■□□ 2.9
FAAP20-201ENST00000378543 ZRANB1Q9UGI0 708 aa33.15■■■□□ 2.9
FAAP20-201ENST00000378543 HDGFL2Q7Z4V5 671 aaPredicted RBP33.13■■■□□ 2.89
FAAP20-201ENST00000378543 ARHGEF25Q86VW2 580 aa33.13■■■□□ 2.89
FAAP20-201ENST00000378543 RGPD5Q99666 1765 aa33.13■■■□□ 2.89
FAAP20-201ENST00000378543 AXIN2Q9Y2T1 843 aa33.12■■■□□ 2.89
FAAP20-201ENST00000378543 NFAT5O94916 1531 aa33.12■■■□□ 2.89
FAAP20-201ENST00000378543 CRB1P82279 1406 aa33.11■■■□□ 2.89
FAAP20-201ENST00000378543 RGPD1P0DJD0 1748 aa33.11■■■□□ 2.89
FAAP20-201ENST00000378543 USP54Q70EL1 1684 aa33.1■■■□□ 2.89
FAAP20-201ENST00000378543 USP31Q70CQ4 1352 aa33.1■■■□□ 2.89
FAAP20-201ENST00000378543 SLC24A1O60721 1099 aa33.1■■■□□ 2.89
FAAP20-201ENST00000378543 NME9Q86XW9 330 aa33.1■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms