RNA–Protein interactions for RNA: ENST00000378292.7

TPM2-203, Transcript of tropomyosin 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM2, Length 2,147 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-203ENST00000378292 NCBP3Q53F19 620 aaKnown RBP34.82■■■■□ 3.16
TPM2-203ENST00000378292 PNPLA6Q8IY17 1366 aa34.82■■■■□ 3.16
TPM2-203ENST00000378292 WDR63Q8IWG1 891 aa34.81■■■■□ 3.16
TPM2-203ENST00000378292 ARHGAP23Q9P227 1491 aa34.81■■■■□ 3.16
TPM2-203ENST00000378292 ADGRB2O60241 1585 aa34.81■■■■□ 3.16
TPM2-203ENST00000378292 CDC42BPGQ6DT37 1551 aa34.81■■■■□ 3.16
TPM2-203ENST00000378292 NCKAP5LQ9HCH0 1330 aa34.8■■■■□ 3.16
TPM2-203ENST00000378292 SLC26A8Q96RN1 970 aa34.79■■■■□ 3.16
TPM2-203ENST00000378292 DIAPH1O60610 1272 aaKnown RBP34.78■■■■□ 3.16
TPM2-203ENST00000378292 PLEKHF1Q96S99 279 aa34.77■■■■□ 3.16
TPM2-203ENST00000378292 PRR36Q9H6K5 1346 aa34.76■■■■□ 3.15
TPM2-203ENST00000378292 BCAR3O75815 825 aa34.75■■■■□ 3.15
TPM2-203ENST00000378292 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.75■■■■□ 3.15
TPM2-203ENST00000378292 PTPRUQ92729 1446 aa34.74■■■■□ 3.15
TPM2-203ENST00000378292 MON2Q7Z3U7 1717 aa34.74■■■■□ 3.15
TPM2-203ENST00000378292 THEMISQ8N1K5 641 aaPredicted RBP34.74■■■■□ 3.15
TPM2-203ENST00000378292 POLKQ9UBT6 870 aa34.74■■■■□ 3.15
TPM2-203ENST00000378292 NME9Q86XW9 330 aa34.73■■■■□ 3.15
TPM2-203ENST00000378292 FBLN1P23142 703 aa34.73■■■■□ 3.15
TPM2-203ENST00000378292 AKAP12Q02952 1782 aa34.71■■■■□ 3.15
TPM2-203ENST00000378292 ITSN1Q15811 1721 aa34.7■■■■□ 3.15
TPM2-203ENST00000378292 PPM1GO15355 546 aaPredicted RBP34.7■■■■□ 3.15
TPM2-203ENST00000378292 TBX22Q9Y458 520 aa34.7■■■■□ 3.15
TPM2-203ENST00000378292 MAPK8IP3Q9UPT6 1336 aa34.69■■■■□ 3.14
TPM2-203ENST00000378292 ZNF692Q9BU19 519 aaPredicted RBP34.69■■■■□ 3.14
TPM2-203ENST00000378292 MAP2P11137 1827 aaKnown RBP34.69■■■■□ 3.14
TPM2-203ENST00000378292 TMPOP42166 694 aaKnown RBP34.67■■■■□ 3.14
TPM2-203ENST00000378292 ZRANB1Q9UGI0 708 aa34.67■■■■□ 3.14
TPM2-203ENST00000378292 AMOTL2Q9Y2J4 779 aa34.67■■■■□ 3.14
TPM2-203ENST00000378292 PNNQ9H307 717 aaKnown RBP34.65■■■■□ 3.14
TPM2-203ENST00000378292 MYH16Q9H6N6 1097 aa34.65■■■■□ 3.14
TPM2-203ENST00000378292 COG3Q96JB2 828 aa34.64■■■■□ 3.14
TPM2-203ENST00000378292 FANCIQ9NVI1 1328 aa34.63■■■■□ 3.13
TPM2-203ENST00000378292 AATKQ6ZMQ8 1374 aa34.63■■■■□ 3.13
TPM2-203ENST00000378292 EMILIN1Q9Y6C2 1016 aa34.63■■■■□ 3.13
TPM2-203ENST00000378292 TOPAZ1Q8N9V7 1692 aa34.62■■■■□ 3.13
TPM2-203ENST00000378292 DIP2AQ14689 1571 aa34.61■■■■□ 3.13
TPM2-203ENST00000378292 FCHSD2O94868 740 aa34.61■■■■□ 3.13
TPM2-203ENST00000378292 TRIM35Q9UPQ4 493 aa34.6■■■■□ 3.13
TPM2-203ENST00000378292 PTCH1Q13635 1447 aa34.6■■■■□ 3.13
TPM2-203ENST00000378292 NUTM2FA1L443 756 aa34.6■■■■□ 3.13
TPM2-203ENST00000378292 RARSP54136 660 aaKnown RBP34.59■■■■□ 3.13
TPM2-203ENST00000378292 PLEKHG3A1L390 1219 aa34.58■■■■□ 3.13
TPM2-203ENST00000378292 ACEP12821 1306 aa34.58■■■■□ 3.13
TPM2-203ENST00000378292 CDK12Q9NYV4 1490 aaPredicted RBP34.58■■■■□ 3.13
TPM2-203ENST00000378292 LRRC7Q96NW7 1537 aa34.57■■■■□ 3.13
TPM2-203ENST00000378292 PDE3AQ14432 1141 aa34.57■■■■□ 3.12
TPM2-203ENST00000378292 CEP170BQ9Y4F5 1589 aaPredicted RBP34.56■■■■□ 3.12
TPM2-203ENST00000378292 RIPK4P57078 832 aa34.55■■■■□ 3.12
TPM2-203ENST00000378292 RSPH6AQ9H0K4 717 aa34.55■■■■□ 3.12
TPM2-203ENST00000378292 TCERG1O14776 1098 aaKnown RBP34.55■■■■□ 3.12
TPM2-203ENST00000378292 KDM2BQ8NHM5 1336 aa34.54■■■■□ 3.12
TPM2-203ENST00000378292 CANXP27824 592 aaKnown RBP34.54■■■■□ 3.12
TPM2-203ENST00000378292 NRKQ7Z2Y5 1582 aa34.54■■■■□ 3.12
TPM2-203ENST00000378292 TTC21BQ7Z4L5 1316 aa34.54■■■■□ 3.12
TPM2-203ENST00000378292 RIMS1Q86UR5 1692 aaKnown RBP34.53■■■■□ 3.12
TPM2-203ENST00000378292 PRKAR2BP31323 418 aa34.53■■■■□ 3.12
TPM2-203ENST00000378292 IL13P35225 146 aa34.52■■■■□ 3.12
TPM2-203ENST00000378292 RRS1Q15050 365 aaKnown RBP34.52■■■■□ 3.12
TPM2-203ENST00000378292 IL16Q14005 1332 aa34.5■■■■□ 3.11
TPM2-203ENST00000378292 USP6P35125 1406 aa34.5■■■■□ 3.11
TPM2-203ENST00000378292 TSR2Q969E8 191 aaKnown RBP34.5■■■■□ 3.11
TPM2-203ENST00000378292 CENPQQ7L2Z9 268 aaPredicted RBP34.49■■■■□ 3.11
TPM2-203ENST00000378292 FRAT1Q92837 279 aaPredicted RBP34.49■■■■□ 3.11
TPM2-203ENST00000378292 XRN1Q8IZH2 1706 aaKnown RBP34.49■■■■□ 3.11
TPM2-203ENST00000378292 NEFMP07197 916 aa34.49■■■■□ 3.11
TPM2-203ENST00000378292 HMOX1P09601 288 aa34.48■■■■□ 3.11
TPM2-203ENST00000378292 PANK1Q8TE04 598 aa34.46■■■■□ 3.11
TPM2-203ENST00000378292 CT47B1P0C2W7 299 aaPredicted RBP34.46■■■■□ 3.11
TPM2-203ENST00000378292 BCL2L13Q9BXK5 485 aa34.45■■■■□ 3.11
TPM2-203ENST00000378292 OVOS2A0A0J9YW53 1432 aa34.44■■■■□ 3.1
TPM2-203ENST00000378292 OVOS2Q6IE36 1432 aa34.44■■■■□ 3.1
TPM2-203ENST00000378292 MS4A1P11836 297 aa34.43■■■■□ 3.1
TPM2-203ENST00000378292 PHACTR3Q96KR7 559 aa34.43■■■■□ 3.1
TPM2-203ENST00000378292 EXOSC9Q06265 439 aaKnown RBP34.42■■■■□ 3.1
TPM2-203ENST00000378292 COG6Q9Y2V7 657 aa34.42■■■■□ 3.1
TPM2-203ENST00000378292 PIK3R4Q99570 1358 aa34.42■■■■□ 3.1
TPM2-203ENST00000378292 KCNA6P17658 529 aa34.42■■■■□ 3.1
TPM2-203ENST00000378292 SSH2Q76I76 1423 aa34.41■■■■□ 3.1
TPM2-203ENST00000378292 PMFBP1Q8TBY8 1022 aa34.4■■■■□ 3.1
TPM2-203ENST00000378292 NFE2L2Q16236 605 aa34.4■■■■□ 3.1
TPM2-203ENST00000378292 SKAP1Q86WV1 359 aa34.39■■■■□ 3.1
TPM2-203ENST00000378292 MSH5O43196 834 aa34.39■■■■□ 3.1
TPM2-203ENST00000378292 RGPD8O14715 1765 aaPredicted RBP34.37■■■■□ 3.09
TPM2-203ENST00000378292 NALCNQ8IZF0 1738 aa34.36■■■■□ 3.09
TPM2-203ENST00000378292 ANKLE2Q86XL3 938 aa34.36■■■■□ 3.09
TPM2-203ENST00000378292 CLUAP1Q96AJ1 413 aa34.35■■■■□ 3.09
TPM2-203ENST00000378292 ADAMTSL3P82987 1691 aa34.35■■■■□ 3.09
TPM2-203ENST00000378292 TTC21AQ8NDW8 1320 aa34.35■■■■□ 3.09
TPM2-203ENST00000378292 ZNF142P52746 1687 aaPredicted RBP34.35■■■■□ 3.09
TPM2-203ENST00000378292 RLBP1P12271 317 aa34.34■■■■□ 3.09
TPM2-203ENST00000378292 NGDNQ8NEJ9 315 aaKnown RBP34.34■■■■□ 3.09
TPM2-203ENST00000378292 USP31Q70CQ4 1352 aa34.34■■■■□ 3.09
TPM2-203ENST00000378292 TNNQ9UQP3 1299 aa34.34■■■■□ 3.09
TPM2-203ENST00000378292 PDE4AP27815 886 aa34.32■■■■□ 3.08
TPM2-203ENST00000378292 ANKARQ7Z5J8 1434 aa34.31■■■■□ 3.08
TPM2-203ENST00000378292 SMC4Q9NTJ3 1288 aa34.31■■■■□ 3.08
TPM2-203ENST00000378292 EIF4A2Q14240 407 aaKnown RBP34.3■■■■□ 3.08
TPM2-203ENST00000378292 ZKSCAN2Q63HK3 967 aa34.29■■■■□ 3.08
TPM2-203ENST00000378292 BACH2Q9BYV9 841 aa34.28■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms