RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 TMEM51Q9NW97 253 aa13.94□□□□□ -0.18
PCDHGA1-201ENST00000378105 ST20-MTHFSA0A0A6YYL1 179 aa13.93□□□□□ -0.18
PCDHGA1-201ENST00000378105 DIP2AQ14689 1571 aa13.92□□□□□ -0.18
PCDHGA1-201ENST00000378105 ZNF526Q8TF50 670 aaPredicted RBP13.92□□□□□ -0.18
PCDHGA1-201ENST00000378105 KDM4FA0A1W2PPD8 638 aa13.92□□□□□ -0.18
PCDHGA1-201ENST00000378105 EID1Q9Y6B2 187 aa13.92□□□□□ -0.18
PCDHGA1-201ENST00000378105 NFKBIBQ15653 356 aa13.91□□□□□ -0.18
PCDHGA1-201ENST00000378105 FAM13BQ9NYF5 915 aa13.91□□□□□ -0.18
PCDHGA1-201ENST00000378105 CNTLNQ9NXG0 1405 aa13.91□□□□□ -0.18
PCDHGA1-201ENST00000378105 DNTTIP2Q5QJE6 756 aaKnown RBP13.91□□□□□ -0.18
PCDHGA1-201ENST00000378105 PDCL3Q9H2J4 239 aa13.9□□□□□ -0.18
PCDHGA1-201ENST00000378105 U2SURPO15042 1029 aaKnown RBP13.9□□□□□ -0.18
PCDHGA1-201ENST00000378105 APPP05067 770 aa13.9□□□□□ -0.19
PCDHGA1-201ENST00000378105 MYCNP04198 464 aaPredicted RBP13.89□□□□□ -0.19
PCDHGA1-201ENST00000378105 CFAP53Q96M91 514 aa13.88□□□□□ -0.19
PCDHGA1-201ENST00000378105 NCLP19338 710 aaKnown RBP13.88□□□□□ -0.19
PCDHGA1-201ENST00000378105 EP400Q96L91 3159 aa13.88□□□□□ -0.19
PCDHGA1-201ENST00000378105 ADAMTS13Q76LX8 1427 aa13.87□□□□□ -0.19
PCDHGA1-201ENST00000378105 PPP4R2Q9NY27 417 aa13.87□□□□□ -0.19
PCDHGA1-201ENST00000378105 GPRASP1Q5JY77 1395 aa13.87□□□□□ -0.19
PCDHGA1-201ENST00000378105 PHRF1Q9P1Y6 1649 aaKnown RBP13.86□□□□□ -0.19
PCDHGA1-201ENST00000378105 RALGAPBQ86X10 1494 aa13.86□□□□□ -0.19
PCDHGA1-201ENST00000378105 SETD1BQ9UPS6 1966 aaKnown RBP13.85□□□□□ -0.19
PCDHGA1-201ENST00000378105 ALS2Q96Q42 1657 aa13.85□□□□□ -0.19
PCDHGA1-201ENST00000378105 TPRNQ4KMQ1 711 aa13.85□□□□□ -0.19
PCDHGA1-201ENST00000378105 TULP4Q9NRJ4 1543 aa13.85□□□□□ -0.19
PCDHGA1-201ENST00000378105 TMEM132EQ6IEE7 984 aa13.85□□□□□ -0.19
PCDHGA1-201ENST00000378105 MORC1Q86VD1 984 aa13.85□□□□□ -0.19
PCDHGA1-201ENST00000378105 CNKSR2Q8WXI2 1034 aa13.85□□□□□ -0.19
PCDHGA1-201ENST00000378105 VGFO15240 615 aaPredicted RBP13.85□□□□□ -0.19
PCDHGA1-201ENST00000378105 PPP4R3BQ5MIZ7 849 aa13.84□□□□□ -0.19
PCDHGA1-201ENST00000378105 DLC1Q96QB1 1528 aa13.84□□□□□ -0.19
PCDHGA1-201ENST00000378105 PTPRUQ92729 1446 aa13.84□□□□□ -0.19
PCDHGA1-201ENST00000378105 MINK1Q8N4C8 1332 aaPredicted RBP13.83□□□□□ -0.19
PCDHGA1-201ENST00000378105 IRX3P78415 501 aaPredicted RBP13.83□□□□□ -0.2
PCDHGA1-201ENST00000378105 WNK3Q9BYP7 1800 aa13.82□□□□□ -0.2
PCDHGA1-201ENST00000378105 NHSL1Q5SYE7 1610 aa13.82□□□□□ -0.2
PCDHGA1-201ENST00000378105 CAMTA1Q9Y6Y1 1673 aa13.82□□□□□ -0.2
PCDHGA1-201ENST00000378105 FRAT2O75474 233 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA1-201ENST00000378105 VIRMAQ69YN4 1812 aaKnown RBP13.82□□□□□ -0.2
PCDHGA1-201ENST00000378105 FAM43BQ6ZT52 329 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA1-201ENST00000378105 CD163L1Q9NR16 1453 aa13.82□□□□□ -0.2
PCDHGA1-201ENST00000378105 BCCIPQ9P287 314 aaKnown RBP eCLIP13.81□□□□□ -0.2
PCDHGA1-201ENST00000378105 TAOK2Q9UL54 1235 aa13.81□□□□□ -0.2
PCDHGA1-201ENST00000378105 TECPR2O15040 1411 aa13.81□□□□□ -0.2
PCDHGA1-201ENST00000378105 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.81□□□□□ -0.2
PCDHGA1-201ENST00000378105 RNF216Q9NWF9 866 aaPredicted RBP13.81□□□□□ -0.2
PCDHGA1-201ENST00000378105 SRCAPQ6ZRS2 3230 aa13.81□□□□□ -0.2
PCDHGA1-201ENST00000378105 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.8□□□□□ -0.2
PCDHGA1-201ENST00000378105 RGS22Q8NE09 1264 aa13.8□□□□□ -0.2
PCDHGA1-201ENST00000378105 HDGFL2Q7Z4V5 671 aaPredicted RBP13.8□□□□□ -0.2
PCDHGA1-201ENST00000378105 NGEFQ8N5V2 710 aa13.8□□□□□ -0.2
PCDHGA1-201ENST00000378105 CFAP70Q5T0N1 1121 aa13.79□□□□□ -0.2
PCDHGA1-201ENST00000378105 RGPD1P0DJD0 1748 aa13.79□□□□□ -0.2
PCDHGA1-201ENST00000378105 SHANK3Q9BYB0 1731 aa13.79□□□□□ -0.2
PCDHGA1-201ENST00000378105 FAM193AP78312 1265 aa13.78□□□□□ -0.2
PCDHGA1-201ENST00000378105 NGDNQ8NEJ9 315 aaKnown RBP13.78□□□□□ -0.2
PCDHGA1-201ENST00000378105 SLC52A1Q9NWF4 448 aa13.78□□□□□ -0.2
PCDHGA1-201ENST00000378105 NUDCQ9Y266 331 aa13.78□□□□□ -0.2
PCDHGA1-201ENST00000378105 NLRP1Q9C000 1473 aa13.78□□□□□ -0.2
PCDHGA1-201ENST00000378105 HDAC5Q9UQL6 1122 aa13.78□□□□□ -0.2
PCDHGA1-201ENST00000378105 MAPK8IP3Q9UPT6 1336 aa13.78□□□□□ -0.2
PCDHGA1-201ENST00000378105 USP47Q96K76 1375 aa13.78□□□□□ -0.2
PCDHGA1-201ENST00000378105 NBPF1Q3BBV0 1214 aa13.77□□□□□ -0.21
PCDHGA1-201ENST00000378105 LMO7Q8WWI1 1683 aa13.77□□□□□ -0.21
PCDHGA1-201ENST00000378105 KIF20BQ96Q89 1820 aa13.76□□□□□ -0.21
PCDHGA1-201ENST00000378105 IGSF3O75054 1194 aa13.76□□□□□ -0.21
PCDHGA1-201ENST00000378105 COL18A1P39060 1754 aa13.76□□□□□ -0.21
PCDHGA1-201ENST00000378105 PANK3Q9H999 370 aa13.75□□□□□ -0.21
PCDHGA1-201ENST00000378105 PPP6R1Q9UPN7 881 aa13.75□□□□□ -0.21
PCDHGA1-201ENST00000378105 PIK3C2AO00443 1686 aa13.75□□□□□ -0.21
PCDHGA1-201ENST00000378105 CGNQ9P2M7 1197 aaKnown RBP13.74□□□□□ -0.21
PCDHGA1-201ENST00000378105 EIF3AQ14152 1382 aaKnown RBP13.74□□□□□ -0.21
PCDHGA1-201ENST00000378105 EP400NLQ6ZTU2 488 aa13.74□□□□□ -0.21
PCDHGA1-201ENST00000378105 CEBPAP49715 358 aaPredicted RBP13.73□□□□□ -0.21
PCDHGA1-201ENST00000378105 NBPF8Q3BBV2 869 aa13.73□□□□□ -0.21
PCDHGA1-201ENST00000378105 HSP90B1P14625 803 aaKnown RBP13.73□□□□□ -0.21
PCDHGA1-201ENST00000378105 KTN1Q86UP2 1357 aaKnown RBP13.73□□□□□ -0.21
PCDHGA1-201ENST00000378105 GZF1Q9H116 711 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA1-201ENST00000378105 ZMYM3Q14202 1370 aa13.72□□□□□ -0.21
PCDHGA1-201ENST00000378105 U2AF1L5P0DN76 240 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA1-201ENST00000378105 U2AF1Q01081 240 aaKnown RBP eCLIP13.72□□□□□ -0.21
PCDHGA1-201ENST00000378105 TXNDC2Q86VQ3 553 aa13.72□□□□□ -0.21
PCDHGA1-201ENST00000378105 MPNDQ8N594 471 aa13.72□□□□□ -0.21
PCDHGA1-201ENST00000378105 PANK2Q9BZ23 570 aa13.72□□□□□ -0.21
PCDHGA1-201ENST00000378105 CHRM1P11229 460 aaPredicted RBP13.71□□□□□ -0.21
PCDHGA1-201ENST00000378105 COL22A1Q8NFW1 1626 aaPredicted RBP13.71□□□□□ -0.21
PCDHGA1-201ENST00000378105 TERF2IPQ9NYB0 399 aa13.71□□□□□ -0.21
PCDHGA1-201ENST00000378105 SLC26A8Q96RN1 970 aa13.71□□□□□ -0.22
PCDHGA1-201ENST00000378105 PEAK1Q9H792 1746 aa13.71□□□□□ -0.22
PCDHGA1-201ENST00000378105 FBXO31Q5XUX0 539 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA1-201ENST00000378105 LTV1Q96GA3 475 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA1-201ENST00000378105 KIAA1211Q6ZU35 1233 aa13.7□□□□□ -0.22
PCDHGA1-201ENST00000378105 ITSN1Q15811 1721 aa13.7□□□□□ -0.22
PCDHGA1-201ENST00000378105 PRR29P0C7W0 189 aa13.69□□□□□ -0.22
PCDHGA1-201ENST00000378105 CLCN1P35523 988 aa13.69□□□□□ -0.22
PCDHGA1-201ENST00000378105 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.69□□□□□ -0.22
PCDHGA1-201ENST00000378105 ZNF592Q92610 1267 aa13.68□□□□□ -0.22
PCDHGA1-201ENST00000378105 CCDC9Q9Y3X0 531 aaKnown RBP13.68□□□□□ -0.22
PCDHGA1-201ENST00000378105 CDC42BPGQ6DT37 1551 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms