RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 AMOTL2Q9Y2J4 779 aa10.38□□□□□ -0.75
CKAP2-203ENST00000378037 LAMC1P11047 1609 aa10.38□□□□□ -0.75
CKAP2-203ENST00000378037 SETD1BQ9UPS6 1966 aaKnown RBP10.38□□□□□ -0.75
CKAP2-203ENST00000378037 KRT24Q2M2I5 525 aa10.37□□□□□ -0.75
CKAP2-203ENST00000378037 SLIT1O75093 1534 aa10.37□□□□□ -0.75
CKAP2-203ENST00000378037 MED14O60244 1454 aa10.37□□□□□ -0.75
CKAP2-203ENST00000378037 PTPRMP28827 1452 aa10.36□□□□□ -0.75
CKAP2-203ENST00000378037 AEBP1Q8IUX7 1158 aa10.36□□□□□ -0.75
CKAP2-203ENST00000378037 DIP2AQ14689 1571 aa10.36□□□□□ -0.75
CKAP2-203ENST00000378037 C14orf93Q9H972 538 aaKnown RBP10.36□□□□□ -0.75
CKAP2-203ENST00000378037 NOL8Q76FK4 1167 aaKnown RBP10.35□□□□□ -0.75
CKAP2-203ENST00000378037 PROSER2Q86WR7 435 aaPredicted RBP10.35□□□□□ -0.75
CKAP2-203ENST00000378037 RTN4Q9NQC3 1192 aaKnown RBP10.35□□□□□ -0.75
CKAP2-203ENST00000378037 SPHKAPQ2M3C7 1700 aa10.35□□□□□ -0.75
CKAP2-203ENST00000378037 CABLES1Q8TDN4 633 aa10.35□□□□□ -0.75
CKAP2-203ENST00000378037 MFAP1P55081 439 aaKnown RBP10.35□□□□□ -0.75
CKAP2-203ENST00000378037 HSP90AB2PQ58FF8 381 aa10.35□□□□□ -0.75
CKAP2-203ENST00000378037 SYTL4Q96C24 671 aaPredicted RBP10.34□□□□□ -0.75
CKAP2-203ENST00000378037 RUNDC1Q96C34 613 aa10.34□□□□□ -0.75
CKAP2-203ENST00000378037 MYH16Q9H6N6 1097 aa10.34□□□□□ -0.75
CKAP2-203ENST00000378037 BRD4O60885 1362 aaPredicted RBP10.34□□□□□ -0.75
CKAP2-203ENST00000378037 WWC1Q8IX03 1113 aa10.34□□□□□ -0.75
CKAP2-203ENST00000378037 LNPKQ9C0E8 428 aa10.34□□□□□ -0.75
CKAP2-203ENST00000378037 E9PCH4 1651 aa10.34□□□□□ -0.75
CKAP2-203ENST00000378037 ARHGAP23Q9P227 1491 aa10.33□□□□□ -0.76
CKAP2-203ENST00000378037 FYB1O15117 783 aa10.33□□□□□ -0.76
CKAP2-203ENST00000378037 AIMP1Q12904 312 aaKnown RBP10.33□□□□□ -0.76
CKAP2-203ENST00000378037 KNDC1Q76NI1 1749 aa10.33□□□□□ -0.76
CKAP2-203ENST00000378037 NLRP2Q9NX02 1062 aa10.33□□□□□ -0.76
CKAP2-203ENST00000378037 LTKP29376 864 aa10.33□□□□□ -0.76
CKAP2-203ENST00000378037 UPF2Q9HAU5 1272 aaKnown RBP10.33□□□□□ -0.76
CKAP2-203ENST00000378037 STRN4Q9NRL3 753 aa10.33□□□□□ -0.76
CKAP2-203ENST00000378037 ANXA1P04083 346 aa10.32□□□□□ -0.76
CKAP2-203ENST00000378037 PLEKHH1Q9ULM0 1364 aa10.32□□□□□ -0.76
CKAP2-203ENST00000378037 E9PSI1 815 aa10.32□□□□□ -0.76
CKAP2-203ENST00000378037 PDE4AP27815 886 aa10.32□□□□□ -0.76
CKAP2-203ENST00000378037 CHRNA2Q15822 529 aa10.32□□□□□ -0.76
CKAP2-203ENST00000378037 CCDC61Q9Y6R9 512 aa10.32□□□□□ -0.76
CKAP2-203ENST00000378037 OS9Q13438 667 aaPredicted RBP10.31□□□□□ -0.76
CKAP2-203ENST00000378037 CEP170BQ9Y4F5 1589 aaPredicted RBP10.31□□□□□ -0.76
CKAP2-203ENST00000378037 NLRP1Q9C000 1473 aa10.31□□□□□ -0.76
CKAP2-203ENST00000378037 KCNA6P17658 529 aa10.31□□□□□ -0.76
CKAP2-203ENST00000378037 PIP4K2AP48426 406 aaPredicted RBP10.31□□□□□ -0.76
CKAP2-203ENST00000378037 PHACTR3Q96KR7 559 aa10.31□□□□□ -0.76
CKAP2-203ENST00000378037 ANKRD45Q5TZF3 282 aa10.3□□□□□ -0.76
CKAP2-203ENST00000378037 NOP58Q9Y2X3 529 aaKnown RBP10.3□□□□□ -0.76
CKAP2-203ENST00000378037 NOB1Q9ULX3 412 aaKnown RBP10.3□□□□□ -0.76
CKAP2-203ENST00000378037 CHMP3Q9Y3E7 222 aa10.3□□□□□ -0.76
CKAP2-203ENST00000378037 PTPRTO14522 1441 aa10.29□□□□□ -0.76
CKAP2-203ENST00000378037 UHRF1BP1Q6BDS2 1440 aa10.29□□□□□ -0.76
CKAP2-203ENST00000378037 FOXD4L6Q3SYB3 417 aaPredicted RBP10.29□□□□□ -0.76
CKAP2-203ENST00000378037 FOXD4L5Q5VV16 416 aaPredicted RBP10.29□□□□□ -0.76
CKAP2-203ENST00000378037 FOXD4L3Q6VB84 417 aaPredicted RBP10.29□□□□□ -0.76
CKAP2-203ENST00000378037 FOXD4L4Q8WXT5 416 aaPredicted RBP10.29□□□□□ -0.76
CKAP2-203ENST00000378037 TMEM131LA2VDJ0 1609 aa10.29□□□□□ -0.76
CKAP2-203ENST00000378037 WASLO00401 505 aaPredicted RBP10.29□□□□□ -0.76
CKAP2-203ENST00000378037 THEMISQ8N1K5 641 aaPredicted RBP10.29□□□□□ -0.76
CKAP2-203ENST00000378037 PIP4K2BP78356 416 aa10.28□□□□□ -0.76
CKAP2-203ENST00000378037 TSPYL4Q9UJ04 414 aa10.28□□□□□ -0.76
CKAP2-203ENST00000378037 ACEP12821 1306 aa10.28□□□□□ -0.76
CKAP2-203ENST00000378037 F6X3S4 739 aa10.28□□□□□ -0.76
CKAP2-203ENST00000378037 TMPOP42166 694 aaKnown RBP10.28□□□□□ -0.76
CKAP2-203ENST00000378037 DUSP27Q5VZP5 1158 aa10.28□□□□□ -0.76
CKAP2-203ENST00000378037 KIAA1210Q9ULL0 1709 aa10.28□□□□□ -0.76
CKAP2-203ENST00000378037 ANP32EQ9BTT0 268 aa10.28□□□□□ -0.76
CKAP2-203ENST00000378037 FAM177BA6PVY3 158 aa10.27□□□□□ -0.76
CKAP2-203ENST00000378037 PDE3BQ13370 1112 aa10.27□□□□□ -0.76
CKAP2-203ENST00000378037 FKBP5Q13451 457 aaPredicted RBP10.27□□□□□ -0.76
CKAP2-203ENST00000378037 GZF1Q9H116 711 aaPredicted RBP10.27□□□□□ -0.76
CKAP2-203ENST00000378037 XIRP1Q702N8 1843 aaKnown RBP10.27□□□□□ -0.76
CKAP2-203ENST00000378037 ZMYM3Q14202 1370 aa10.27□□□□□ -0.76
CKAP2-203ENST00000378037 NUTM2BA6NNL0 878 aaPredicted RBP10.27□□□□□ -0.77
CKAP2-203ENST00000378037 NUTM2EB1AL46 878 aaPredicted RBP10.27□□□□□ -0.77
CKAP2-203ENST00000378037 ZKSCAN2Q63HK3 967 aa10.27□□□□□ -0.77
CKAP2-203ENST00000378037 NUTM2AQ8IVF1 878 aaPredicted RBP10.27□□□□□ -0.77
CKAP2-203ENST00000378037 SCAF11Q99590 1463 aaKnown RBP10.27□□□□□ -0.77
CKAP2-203ENST00000378037 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.27□□□□□ -0.77
CKAP2-203ENST00000378037 LRRC59Q96AG4 307 aaKnown RBP10.27□□□□□ -0.77
CKAP2-203ENST00000378037 ADGRB3O60242 1522 aa10.27□□□□□ -0.77
CKAP2-203ENST00000378037 RALGAPBQ86X10 1494 aa10.26□□□□□ -0.77
CKAP2-203ENST00000378037 DZIP1LQ8IYY4 767 aaKnown RBP10.26□□□□□ -0.77
CKAP2-203ENST00000378037 SSH1Q8WYL5 1049 aa10.26□□□□□ -0.77
CKAP2-203ENST00000378037 JARID2Q92833 1246 aaPredicted RBP10.26□□□□□ -0.77
CKAP2-203ENST00000378037 PPLO60437 1756 aa10.26□□□□□ -0.77
CKAP2-203ENST00000378037 TRPM2O94759 1503 aa10.26□□□□□ -0.77
CKAP2-203ENST00000378037 DDX54Q8TDD1 881 aaKnown RBP10.26□□□□□ -0.77
CKAP2-203ENST00000378037 ORAI2Q96SN7 254 aa10.26□□□□□ -0.77
CKAP2-203ENST00000378037 SPATA31E1Q6ZUB1 1445 aa10.26□□□□□ -0.77
CKAP2-203ENST00000378037 A2ML1A8K2U0 1454 aa10.26□□□□□ -0.77
CKAP2-203ENST00000378037 RLBP1P12271 317 aa10.26□□□□□ -0.77
CKAP2-203ENST00000378037 ATF3P18847 181 aa10.26□□□□□ -0.77
CKAP2-203ENST00000378037 SLFN5Q08AF3 891 aa10.26□□□□□ -0.77
CKAP2-203ENST00000378037 ANKLE2Q86XL3 938 aa10.26□□□□□ -0.77
CKAP2-203ENST00000378037 TSPYL6Q8N831 410 aa10.26□□□□□ -0.77
CKAP2-203ENST00000378037 TEFQ10587 303 aa10.25□□□□□ -0.77
CKAP2-203ENST00000378037 ALKQ9UM73 1620 aa10.25□□□□□ -0.77
CKAP2-203ENST00000378037 A0A1W2PP64 1363 aa10.24□□□□□ -0.77
CKAP2-203ENST00000378037 LTBP4Q8N2S1 1624 aa10.24□□□□□ -0.77
CKAP2-203ENST00000378037 IQGAP1P46940 1657 aa10.24□□□□□ -0.77
CKAP2-203ENST00000378037 MPRIPQ6WCQ1 1025 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms