RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 CD163L1Q9NR16 1453 aa18.43■□□□□ 0.54
CKAP2-202ENST00000378034 MON2Q7Z3U7 1717 aa18.43■□□□□ 0.54
CKAP2-202ENST00000378034 SSH2Q76I76 1423 aa18.43■□□□□ 0.54
CKAP2-202ENST00000378034 KTN1Q86UP2 1357 aaKnown RBP18.43■□□□□ 0.54
CKAP2-202ENST00000378034 LMOD2Q6P5Q4 547 aa18.42■□□□□ 0.54
CKAP2-202ENST00000378034 LRP6O75581 1613 aa18.4■□□□□ 0.54
CKAP2-202ENST00000378034 NRKQ7Z2Y5 1582 aa18.4■□□□□ 0.54
CKAP2-202ENST00000378034 ANKRD36BQ8N2N9 1353 aa18.4■□□□□ 0.54
CKAP2-202ENST00000378034 TTC21AQ8NDW8 1320 aa18.39■□□□□ 0.54
CKAP2-202ENST00000378034 MYOM1P52179 1685 aa18.39■□□□□ 0.54
CKAP2-202ENST00000378034 NUTM2BA6NNL0 878 aaPredicted RBP18.39■□□□□ 0.53
CKAP2-202ENST00000378034 NUTM2EB1AL46 878 aaPredicted RBP18.39■□□□□ 0.53
CKAP2-202ENST00000378034 NUTM2AQ8IVF1 878 aaPredicted RBP18.39■□□□□ 0.53
CKAP2-202ENST00000378034 A0A1W2PP64 1363 aa18.39■□□□□ 0.53
CKAP2-202ENST00000378034 ABTB2Q8N961 1025 aa18.39■□□□□ 0.53
CKAP2-202ENST00000378034 TTC21BQ7Z4L5 1316 aa18.38■□□□□ 0.53
CKAP2-202ENST00000378034 EDC4Q6P2E9 1401 aaKnown RBP18.38■□□□□ 0.53
CKAP2-202ENST00000378034 MEX3CQ5U5Q3 659 aaKnown RBP18.37■□□□□ 0.53
CKAP2-202ENST00000378034 ABCA3Q99758 1704 aa18.37■□□□□ 0.53
CKAP2-202ENST00000378034 NLRP13Q86W25 1043 aa18.36■□□□□ 0.53
CKAP2-202ENST00000378034 MARF1Q9Y4F3 1742 aaKnown RBP18.36■□□□□ 0.53
CKAP2-202ENST00000378034 CRYBG1Q9Y4K1 1723 aa18.36■□□□□ 0.53
CKAP2-202ENST00000378034 C11orf95C9JLR9 678 aaPredicted RBP18.35■□□□□ 0.53
CKAP2-202ENST00000378034 HAP1P54257 671 aaPredicted RBP18.35■□□□□ 0.53
CKAP2-202ENST00000378034 PIK3C2AO00443 1686 aa18.34■□□□□ 0.53
CKAP2-202ENST00000378034 POLR3GLQ9BT43 218 aa18.34■□□□□ 0.53
CKAP2-202ENST00000378034 CABLES1Q8TDN4 633 aa18.33■□□□□ 0.53
CKAP2-202ENST00000378034 USP19O94966 1318 aa18.33■□□□□ 0.52
CKAP2-202ENST00000378034 KIF7Q2M1P5 1343 aa18.33■□□□□ 0.52
CKAP2-202ENST00000378034 ADAMTS2O95450 1211 aa18.32■□□□□ 0.52
CKAP2-202ENST00000378034 NLRP6P59044 892 aa18.32■□□□□ 0.52
CKAP2-202ENST00000378034 PHF23Q9BUL5 403 aaPredicted RBP18.32■□□□□ 0.52
CKAP2-202ENST00000378034 PHRF1Q9P1Y6 1649 aaKnown RBP18.32■□□□□ 0.52
CKAP2-202ENST00000378034 NUTM2GQ5VZR2 741 aa18.31■□□□□ 0.52
CKAP2-202ENST00000378034 USP54Q70EL1 1684 aa18.31■□□□□ 0.52
CKAP2-202ENST00000378034 USP31Q70CQ4 1352 aa18.31■□□□□ 0.52
CKAP2-202ENST00000378034 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.31■□□□□ 0.52
CKAP2-202ENST00000378034 SLIT3O75094 1523 aa18.29■□□□□ 0.52
CKAP2-202ENST00000378034 C8orf37Q96NL8 207 aa18.29■□□□□ 0.52
CKAP2-202ENST00000378034 CCDC7Q96M83 1385 aa18.29■□□□□ 0.52
CKAP2-202ENST00000378034 PLEKHG5O94827 1062 aa18.28■□□□□ 0.52
CKAP2-202ENST00000378034 NGLY1Q96IV0 654 aa18.28■□□□□ 0.52
CKAP2-202ENST00000378034 NME9Q86XW9 330 aa18.28■□□□□ 0.52
CKAP2-202ENST00000378034 GCP02774 474 aa18.27■□□□□ 0.52
CKAP2-202ENST00000378034 KCNH5Q8NCM2 988 aa18.27■□□□□ 0.52
CKAP2-202ENST00000378034 CARD14Q9BXL6 1004 aa18.27■□□□□ 0.52
CKAP2-202ENST00000378034 WASHC2AQ641Q2 1341 aa18.26■□□□□ 0.51
CKAP2-202ENST00000378034 ZNF772Q68DY9 489 aaPredicted RBP18.26■□□□□ 0.51
CKAP2-202ENST00000378034 FNBP4Q8N3X1 1017 aaPredicted RBP18.26■□□□□ 0.51
CKAP2-202ENST00000378034 NSD3Q9BZ95 1437 aa18.26■□□□□ 0.51
CKAP2-202ENST00000378034 AFF2P51816 1311 aa18.26■□□□□ 0.51
CKAP2-202ENST00000378034 PANK3Q9H999 370 aa18.26■□□□□ 0.51
CKAP2-202ENST00000378034 COL14A1Q05707 1796 aaKnown RBP18.25■□□□□ 0.51
CKAP2-202ENST00000378034 CPDO75976 1380 aa18.25■□□□□ 0.51
CKAP2-202ENST00000378034 OVOS2A0A0J9YW53 1432 aa18.25■□□□□ 0.51
CKAP2-202ENST00000378034 OVOS2Q6IE36 1432 aa18.25■□□□□ 0.51
CKAP2-202ENST00000378034 KIF20BQ96Q89 1820 aa18.24■□□□□ 0.51
CKAP2-202ENST00000378034 RGS17Q9UGC6 210 aaPredicted RBP18.24■□□□□ 0.51
CKAP2-202ENST00000378034 NWD2Q9ULI1 1742 aa18.24■□□□□ 0.51
CKAP2-202ENST00000378034 SLIT2O94813 1529 aa18.23■□□□□ 0.51
CKAP2-202ENST00000378034 FAM83GA6ND36 823 aa18.23■□□□□ 0.51
CKAP2-202ENST00000378034 FYB1O15117 783 aa18.23■□□□□ 0.51
CKAP2-202ENST00000378034 COG3Q96JB2 828 aa18.23■□□□□ 0.51
CKAP2-202ENST00000378034 PRDM11Q9NQV5 511 aa18.23■□□□□ 0.51
CKAP2-202ENST00000378034 KIAA0232Q92628 1395 aa18.23■□□□□ 0.51
CKAP2-202ENST00000378034 CGNL1Q0VF96 1302 aa18.23■□□□□ 0.51
CKAP2-202ENST00000378034 ZRANB1Q9UGI0 708 aa18.22■□□□□ 0.51
CKAP2-202ENST00000378034 PLCH1Q4KWH8 1693 aa18.22■□□□□ 0.51
CKAP2-202ENST00000378034 ZC3H6P61129 1189 aaKnown RBP18.22■□□□□ 0.51
CKAP2-202ENST00000378034 USP21Q9UK80 565 aa18.22■□□□□ 0.51
CKAP2-202ENST00000378034 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.21■□□□□ 0.51
CKAP2-202ENST00000378034 NFAT5O94916 1531 aa18.21■□□□□ 0.51
CKAP2-202ENST00000378034 BCL9LQ86UU0 1499 aa18.2■□□□□ 0.5
CKAP2-202ENST00000378034 UNC5CLQ8IV45 518 aa18.19■□□□□ 0.5
CKAP2-202ENST00000378034 GGNBP2Q9H3C7 697 aa18.19■□□□□ 0.5
CKAP2-202ENST00000378034 KNSTRNQ9Y448 316 aa18.19■□□□□ 0.5
CKAP2-202ENST00000378034 NSD2O96028 1365 aa18.18■□□□□ 0.5
CKAP2-202ENST00000378034 AATKQ6ZMQ8 1374 aa18.18■□□□□ 0.5
CKAP2-202ENST00000378034 ARHGEF25Q86VW2 580 aa18.18■□□□□ 0.5
CKAP2-202ENST00000378034 ABCC6O95255 1503 aa18.17■□□□□ 0.5
CKAP2-202ENST00000378034 TRPC5Q9UL62 973 aaPredicted RBP18.17■□□□□ 0.5
CKAP2-202ENST00000378034 LMO7Q8WWI1 1683 aa18.17■□□□□ 0.5
CKAP2-202ENST00000378034 CHRNA2Q15822 529 aa18.17■□□□□ 0.5
CKAP2-202ENST00000378034 QTRT2Q9H974 415 aaKnown RBP18.17■□□□□ 0.5
CKAP2-202ENST00000378034 BTG4Q9NY30 223 aa18.17■□□□□ 0.5
CKAP2-202ENST00000378034 NRAPQ86VF7 1730 aa18.17■□□□□ 0.5
CKAP2-202ENST00000378034 ANKRD26Q9UPS8 1709 aa18.17■□□□□ 0.5
CKAP2-202ENST00000378034 ATRNO75882 1429 aa18.16■□□□□ 0.5
CKAP2-202ENST00000378034 POTEAQ6S8J7 498 aa18.16■□□□□ 0.5
CKAP2-202ENST00000378034 SOX12O15370 315 aa18.15■□□□□ 0.5
CKAP2-202ENST00000378034 COL18A1P39060 1754 aa18.15■□□□□ 0.5
CKAP2-202ENST00000378034 PER1O15534 1290 aaPredicted RBP18.15■□□□□ 0.5
CKAP2-202ENST00000378034 LTN1O94822 1766 aa18.15■□□□□ 0.5
CKAP2-202ENST00000378034 VPS72Q15906 364 aa18.13■□□□□ 0.49
CKAP2-202ENST00000378034 CAMTA1Q9Y6Y1 1673 aa18.13■□□□□ 0.49
CKAP2-202ENST00000378034 ZBTB7CA1YPR0 619 aa18.12■□□□□ 0.49
CKAP2-202ENST00000378034 RXRBP28702 533 aa18.12■□□□□ 0.49
CKAP2-202ENST00000378034 RBM6P78332 1123 aaKnown RBP18.12■□□□□ 0.49
CKAP2-202ENST00000378034 AMER1Q5JTC6 1135 aaPredicted RBP18.11■□□□□ 0.49
CKAP2-202ENST00000378034 NPC1L1Q9UHC9 1359 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms