RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 RNF20Q5VTR2 975 aa10.61□□□□□ -0.71
PCDH9-202ENST00000377865 BECN2A8MW95 431 aa10.61□□□□□ -0.71
PCDH9-202ENST00000377865 SPATA31E1Q6ZUB1 1445 aa10.61□□□□□ -0.71
PCDH9-202ENST00000377865 KDM2BQ8NHM5 1336 aa10.61□□□□□ -0.71
PCDH9-202ENST00000377865 IGHDP01880 384 aa10.61□□□□□ -0.71
PCDH9-202ENST00000377865 FAM184AQ8NB25 1140 aa10.61□□□□□ -0.71
PCDH9-202ENST00000377865 PLEKHH1Q9ULM0 1364 aa10.61□□□□□ -0.71
PCDH9-202ENST00000377865 UQCRHLA0A096LP55 91 aa10.61□□□□□ -0.71
PCDH9-202ENST00000377865 UQCRHP07919 91 aa10.61□□□□□ -0.71
PCDH9-202ENST00000377865 PRKAR2BP31323 418 aa10.6□□□□□ -0.71
PCDH9-202ENST00000377865 SASS6Q6UVJ0 657 aa10.6□□□□□ -0.71
PCDH9-202ENST00000377865 WDR33Q9C0J8 1336 aaKnown RBP10.6□□□□□ -0.71
PCDH9-202ENST00000377865 GNAI3P08754 354 aa10.6□□□□□ -0.71
PCDH9-202ENST00000377865 SLC12A5Q9H2X9 1139 aa10.6□□□□□ -0.71
PCDH9-202ENST00000377865 ABCA5Q8WWZ7 1642 aa10.6□□□□□ -0.71
PCDH9-202ENST00000377865 FOXD4L6Q3SYB3 417 aaPredicted RBP10.6□□□□□ -0.71
PCDH9-202ENST00000377865 FOXD4L3Q6VB84 417 aaPredicted RBP10.6□□□□□ -0.71
PCDH9-202ENST00000377865 KDM5CP41229 1560 aa10.6□□□□□ -0.71
PCDH9-202ENST00000377865 TMEM57Q8N5G2 664 aa10.59□□□□□ -0.71
PCDH9-202ENST00000377865 FCHSD2O94868 740 aa10.59□□□□□ -0.71
PCDH9-202ENST00000377865 MCM5P33992 734 aa10.59□□□□□ -0.71
PCDH9-202ENST00000377865 TMPOP42166 694 aaKnown RBP10.59□□□□□ -0.71
PCDH9-202ENST00000377865 TNNT3P45378 269 aaPredicted RBP10.59□□□□□ -0.71
PCDH9-202ENST00000377865 HDAC1Q13547 482 aaPredicted RBP10.59□□□□□ -0.71
PCDH9-202ENST00000377865 GOLGA6L1Q8N7Z2 621 aa10.59□□□□□ -0.71
PCDH9-202ENST00000377865 PBRM1Q86U86 1689 aa10.59□□□□□ -0.71
PCDH9-202ENST00000377865 IL16Q14005 1332 aa10.59□□□□□ -0.71
PCDH9-202ENST00000377865 TNPO1Q92973 898 aaKnown RBP10.59□□□□□ -0.71
PCDH9-202ENST00000377865 HMOX1P09601 288 aa10.59□□□□□ -0.71
PCDH9-202ENST00000377865 NEK4P51957 841 aa10.59□□□□□ -0.71
PCDH9-202ENST00000377865 CNTROBQ8N137 903 aa10.59□□□□□ -0.71
PCDH9-202ENST00000377865 AEBP1Q8IUX7 1158 aa10.58□□□□□ -0.72
PCDH9-202ENST00000377865 PDCL3Q9H2J4 239 aa10.58□□□□□ -0.72
PCDH9-202ENST00000377865 TEX35Q5T0J7 233 aa10.58□□□□□ -0.72
PCDH9-202ENST00000377865 CCT4P50991 539 aaKnown RBP10.58□□□□□ -0.72
PCDH9-202ENST00000377865 SF3A1Q15459 793 aaKnown RBP10.58□□□□□ -0.72
PCDH9-202ENST00000377865 TMEM132EQ6IEE7 984 aa10.58□□□□□ -0.72
PCDH9-202ENST00000377865 RNF214Q8ND24 703 aa10.58□□□□□ -0.72
PCDH9-202ENST00000377865 C1orf115Q9H7X2 142 aa10.58□□□□□ -0.72
PCDH9-202ENST00000377865 TSPYL4Q9UJ04 414 aa10.58□□□□□ -0.72
PCDH9-202ENST00000377865 RPAP2Q8IXW5 612 aaPredicted RBP10.58□□□□□ -0.72
PCDH9-202ENST00000377865 SNX21Q969T3 373 aa10.58□□□□□ -0.72
PCDH9-202ENST00000377865 SRCIN1Q9C0H9 1055 aa10.58□□□□□ -0.72
PCDH9-202ENST00000377865 PSMA5P28066 241 aa10.57□□□□□ -0.72
PCDH9-202ENST00000377865 POLR3AO14802 1390 aaPredicted RBP10.57□□□□□ -0.72
PCDH9-202ENST00000377865 ZMYM3Q14202 1370 aa10.57□□□□□ -0.72
PCDH9-202ENST00000377865 IFIT2P09913 472 aaKnown RBP10.57□□□□□ -0.72
PCDH9-202ENST00000377865 CCDC27Q2M243 656 aa10.57□□□□□ -0.72
PCDH9-202ENST00000377865 BMP2KLQ5H9B9 411 aa10.57□□□□□ -0.72
PCDH9-202ENST00000377865 GPS2Q13227 327 aa10.57□□□□□ -0.72
PCDH9-202ENST00000377865 FKBP5Q13451 457 aaPredicted RBP10.57□□□□□ -0.72
PCDH9-202ENST00000377865 BICD2Q8TD16 824 aa10.57□□□□□ -0.72
PCDH9-202ENST00000377865 IFT57Q9NWB7 429 aa10.57□□□□□ -0.72
PCDH9-202ENST00000377865 PDIA4P13667 645 aaKnown RBP10.57□□□□□ -0.72
PCDH9-202ENST00000377865 NGDNQ8NEJ9 315 aaKnown RBP10.57□□□□□ -0.72
PCDH9-202ENST00000377865 VPS37CA5D8V6 355 aaPredicted RBP10.56□□□□□ -0.72
PCDH9-202ENST00000377865 RBM10P98175 930 aaKnown RBP10.56□□□□□ -0.72
PCDH9-202ENST00000377865 DHX8Q14562 1220 aaKnown RBP10.56□□□□□ -0.72
PCDH9-202ENST00000377865 NPC1L1Q9UHC9 1359 aa10.56□□□□□ -0.72
PCDH9-202ENST00000377865 GNAI2P04899 355 aa10.56□□□□□ -0.72
PCDH9-202ENST00000377865 AMER1Q5JTC6 1135 aaPredicted RBP10.56□□□□□ -0.72
PCDH9-202ENST00000377865 AFAP1Q8N556 730 aa10.56□□□□□ -0.72
PCDH9-202ENST00000377865 MLECQ14165 292 aa10.56□□□□□ -0.72
PCDH9-202ENST00000377865 ARGLU1Q9NWB6 273 aaPredicted RBP10.56□□□□□ -0.72
PCDH9-202ENST00000377865 HIP1O00291 1037 aa10.56□□□□□ -0.72
PCDH9-202ENST00000377865 ZNF592Q92610 1267 aa10.56□□□□□ -0.72
PCDH9-202ENST00000377865 NFE2L2Q16236 605 aa10.55□□□□□ -0.72
PCDH9-202ENST00000377865 PDCP20941 246 aa10.55□□□□□ -0.72
PCDH9-202ENST00000377865 UBTFL1P0CB47 393 aaPredicted RBP10.55□□□□□ -0.72
PCDH9-202ENST00000377865 KLHL40Q2TBA0 621 aa10.55□□□□□ -0.72
PCDH9-202ENST00000377865 CCDC30Q5VVM6 783 aa10.55□□□□□ -0.72
PCDH9-202ENST00000377865 NAT10Q9H0A0 1025 aaKnown RBP10.55□□□□□ -0.72
PCDH9-202ENST00000377865 LRRFIP1Q32MZ4 808 aaKnown RBP10.55□□□□□ -0.72
PCDH9-202ENST00000377865 SSH1Q8WYL5 1049 aa10.55□□□□□ -0.72
PCDH9-202ENST00000377865 XRCC6P12956 609 aaKnown RBP eCLIP10.55□□□□□ -0.72
PCDH9-202ENST00000377865 EID1Q9Y6B2 187 aa10.55□□□□□ -0.72
PCDH9-202ENST00000377865 PLEKHG5O94827 1062 aa10.54□□□□□ -0.72
PCDH9-202ENST00000377865 CCDC192P0DO97 292 aa10.54□□□□□ -0.72
PCDH9-202ENST00000377865 LRRCC1Q9C099 1032 aa10.54□□□□□ -0.72
PCDH9-202ENST00000377865 CCDC66A2RUB6 948 aa10.54□□□□□ -0.72
PCDH9-202ENST00000377865 LMOD2Q6P5Q4 547 aa10.54□□□□□ -0.72
PCDH9-202ENST00000377865 CCDC73Q6ZRK6 1079 aa10.54□□□□□ -0.72
PCDH9-202ENST00000377865 TAOK2Q9UL54 1235 aa10.54□□□□□ -0.72
PCDH9-202ENST00000377865 ANKRD36BQ8N2N9 1353 aa10.54□□□□□ -0.72
PCDH9-202ENST00000377865 TRIM27P14373 513 aa10.53□□□□□ -0.72
PCDH9-202ENST00000377865 NUCB1Q02818 461 aa10.53□□□□□ -0.72
PCDH9-202ENST00000377865 CCP110O43303 1012 aa10.53□□□□□ -0.72
PCDH9-202ENST00000377865 GAS2L2Q8NHY3 880 aa10.53□□□□□ -0.72
PCDH9-202ENST00000377865 PER1O15534 1290 aaPredicted RBP10.53□□□□□ -0.72
PCDH9-202ENST00000377865 MAGI3Q5TCQ9 1506 aa10.53□□□□□ -0.72
PCDH9-202ENST00000377865 TPD52L1Q16890 204 aaPredicted RBP10.53□□□□□ -0.72
PCDH9-202ENST00000377865 TESK2Q96S53 571 aa10.53□□□□□ -0.72
PCDH9-202ENST00000377865 MAST1Q9Y2H9 1570 aa10.53□□□□□ -0.72
PCDH9-202ENST00000377865 SSFA2P28290 1259 aa10.53□□□□□ -0.72
PCDH9-202ENST00000377865 C9orf78Q9NZ63 289 aaPredicted RBP10.53□□□□□ -0.72
PCDH9-202ENST00000377865 SYCP2Q9BX26 1530 aa10.52□□□□□ -0.72
PCDH9-202ENST00000377865 GORABQ5T7V8 394 aa10.52□□□□□ -0.73
PCDH9-202ENST00000377865 ZSCAN31Q96LW9 406 aaPredicted RBP10.52□□□□□ -0.73
PCDH9-202ENST00000377865 DDX58O95786 925 aaKnown RBP10.52□□□□□ -0.73
PCDH9-202ENST00000377865 G3BP1Q13283 466 aaKnown RBP eCLIP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms