RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 FYCO1Q9BQS8 1478 aa22.75■■□□□ 1.23
TBC1D4-201ENST00000377625 CCDC173Q0VFZ6 552 aa22.75■■□□□ 1.23
TBC1D4-201ENST00000377625 NFKBIBQ15653 356 aa22.75■■□□□ 1.23
TBC1D4-201ENST00000377625 NASPP49321 788 aaPredicted RBP22.74■■□□□ 1.23
TBC1D4-201ENST00000377625 RRP12Q5JTH9 1297 aaKnown RBP22.74■■□□□ 1.23
TBC1D4-201ENST00000377625 PHF23Q9BUL5 403 aaPredicted RBP22.74■■□□□ 1.23
TBC1D4-201ENST00000377625 CCDC39Q9UFE4 941 aa22.74■■□□□ 1.23
TBC1D4-201ENST00000377625 HSP90B2PQ58FF3 399 aa22.74■■□□□ 1.23
TBC1D4-201ENST00000377625 HSP90AB2PQ58FF8 381 aa22.74■■□□□ 1.23
TBC1D4-201ENST00000377625 CDCA7LQ96GN5 454 aa22.74■■□□□ 1.23
TBC1D4-201ENST00000377625 KINO60870 393 aaKnown RBP22.74■■□□□ 1.23
TBC1D4-201ENST00000377625 C1orf115Q9H7X2 142 aa22.73■■□□□ 1.23
TBC1D4-201ENST00000377625 SMG6Q86US8 1419 aaKnown RBP22.73■■□□□ 1.23
TBC1D4-201ENST00000377625 GNAI2P04899 355 aa22.73■■□□□ 1.23
TBC1D4-201ENST00000377625 CAGE1Q8TC20 777 aa22.73■■□□□ 1.23
TBC1D4-201ENST00000377625 AFAP1Q8N556 730 aa22.73■■□□□ 1.23
TBC1D4-201ENST00000377625 BCL11BQ9C0K0 894 aaPredicted RBP22.73■■□□□ 1.23
TBC1D4-201ENST00000377625 STRN4Q9NRL3 753 aa22.73■■□□□ 1.23
TBC1D4-201ENST00000377625 CNNM1Q9NRU3 951 aa22.73■■□□□ 1.23
TBC1D4-201ENST00000377625 PROSER2Q86WR7 435 aaPredicted RBP22.72■■□□□ 1.23
TBC1D4-201ENST00000377625 TTC39AQ5SRH9 613 aa22.72■■□□□ 1.23
TBC1D4-201ENST00000377625 CDK5RAP3Q96JB5 506 aa22.72■■□□□ 1.23
TBC1D4-201ENST00000377625 PRAM1Q96QH2 718 aa22.72■■□□□ 1.23
TBC1D4-201ENST00000377625 LETM1O95202 739 aaPredicted RBP22.72■■□□□ 1.23
TBC1D4-201ENST00000377625 PDCP20941 246 aa22.72■■□□□ 1.23
TBC1D4-201ENST00000377625 CCDC158Q5M9N0 1113 aa22.71■■□□□ 1.23
TBC1D4-201ENST00000377625 TTLL5Q6EMB2 1281 aa22.71■■□□□ 1.23
TBC1D4-201ENST00000377625 TRIM5Q9C035 493 aa22.71■■□□□ 1.23
TBC1D4-201ENST00000377625 ARHGAP5Q13017 1502 aa22.71■■□□□ 1.23
TBC1D4-201ENST00000377625 TATP17735 454 aaPredicted RBP22.71■■□□□ 1.23
TBC1D4-201ENST00000377625 MRE11P49959 708 aa22.71■■□□□ 1.23
TBC1D4-201ENST00000377625 PDZRN3Q9UPQ7 1066 aa22.71■■□□□ 1.23
TBC1D4-201ENST00000377625 MCM2P49736 904 aa22.71■■□□□ 1.23
TBC1D4-201ENST00000377625 TXLNAP40222 546 aa22.7■■□□□ 1.22
TBC1D4-201ENST00000377625 CAVIN1Q6NZI2 390 aaKnown RBP22.7■■□□□ 1.22
TBC1D4-201ENST00000377625 GCC1Q96CN9 775 aa22.7■■□□□ 1.22
TBC1D4-201ENST00000377625 SMC2O95347 1197 aa22.69■■□□□ 1.22
TBC1D4-201ENST00000377625 SLC4A2P04920 1241 aa22.69■■□□□ 1.22
TBC1D4-201ENST00000377625 MBD3O95983 291 aa22.69■■□□□ 1.22
TBC1D4-201ENST00000377625 HDGFL1Q5TGJ6 251 aa22.69■■□□□ 1.22
TBC1D4-201ENST00000377625 GNL3LQ9NVN8 582 aaKnown RBP22.69■■□□□ 1.22
TBC1D4-201ENST00000377625 NOB1Q9ULX3 412 aaKnown RBP22.69■■□□□ 1.22
TBC1D4-201ENST00000377625 TMEM132AQ24JP5 1023 aa22.69■■□□□ 1.22
TBC1D4-201ENST00000377625 RABEP1Q15276 862 aa22.68■■□□□ 1.22
TBC1D4-201ENST00000377625 FMNL2Q96PY5 1086 aa22.68■■□□□ 1.22
TBC1D4-201ENST00000377625 ZNF396Q96N95 335 aaPredicted RBP22.68■■□□□ 1.22
TBC1D4-201ENST00000377625 FILIP1LQ4L180 1135 aa22.68■■□□□ 1.22
TBC1D4-201ENST00000377625 MAGEC2Q9UBF1 373 aaPredicted RBP22.67■■□□□ 1.22
TBC1D4-201ENST00000377625 STK38Q15208 465 aa22.67■■□□□ 1.22
TBC1D4-201ENST00000377625 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.67■■□□□ 1.22
TBC1D4-201ENST00000377625 NCOA2Q15596 1464 aa22.67■■□□□ 1.22
TBC1D4-201ENST00000377625 LRRC9Q6ZRR7 1453 aa22.67■■□□□ 1.22
TBC1D4-201ENST00000377625 TRAK2O60296 914 aa22.67■■□□□ 1.22
TBC1D4-201ENST00000377625 TSR2Q969E8 191 aaKnown RBP22.67■■□□□ 1.22
TBC1D4-201ENST00000377625 PRPF40AO75400 957 aaKnown RBP22.66■■□□□ 1.22
TBC1D4-201ENST00000377625 KRT18P05783 430 aaKnown RBP22.66■■□□□ 1.22
TBC1D4-201ENST00000377625 SULT6B1Q6IMI4 303 aa22.66■■□□□ 1.22
TBC1D4-201ENST00000377625 CCAR1Q8IX12 1150 aaKnown RBP22.66■■□□□ 1.22
TBC1D4-201ENST00000377625 CEBPZQ03701 1054 aaKnown RBP22.65■■□□□ 1.22
TBC1D4-201ENST00000377625 CABP4P57796 275 aa22.65■■□□□ 1.22
TBC1D4-201ENST00000377625 FIBPO43427 364 aa22.65■■□□□ 1.22
TBC1D4-201ENST00000377625 SMARCE1Q969G3 411 aa22.65■■□□□ 1.22
TBC1D4-201ENST00000377625 RDXP35241 583 aaKnown RBP22.65■■□□□ 1.22
TBC1D4-201ENST00000377625 TSPY26PQ9H489 355 aa22.65■■□□□ 1.22
TBC1D4-201ENST00000377625 BRPF1P55201 1214 aaPredicted RBP22.64■■□□□ 1.22
TBC1D4-201ENST00000377625 AQRO60306 1485 aaKnown RBP eCLIP22.64■■□□□ 1.222e-10■■■□□ 16
TBC1D4-201ENST00000377625 CCT4P50991 539 aaKnown RBP22.63■■□□□ 1.21
TBC1D4-201ENST00000377625 PDE3AQ14432 1141 aa22.63■■□□□ 1.21
TBC1D4-201ENST00000377625 SIL1Q9H173 461 aa22.63■■□□□ 1.21
TBC1D4-201ENST00000377625 ATP2B2Q01814 1243 aa22.63■■□□□ 1.21
TBC1D4-201ENST00000377625 CDK19Q9BWU1 502 aa22.63■■□□□ 1.21
TBC1D4-201ENST00000377625 CYP46A1Q9Y6A2 500 aa22.62■■□□□ 1.21
TBC1D4-201ENST00000377625 SCAPERQ9BY12 1400 aa22.62■■□□□ 1.21
TBC1D4-201ENST00000377625 SLC12A5Q9H2X9 1139 aa22.62■■□□□ 1.21
TBC1D4-201ENST00000377625 PNISRQ8TF01 805 aaKnown RBP22.62■■□□□ 1.21
TBC1D4-201ENST00000377625 ERCC4Q92889 916 aaPredicted RBP22.62■■□□□ 1.21
TBC1D4-201ENST00000377625 LRRCC1Q9C099 1032 aa22.62■■□□□ 1.21
TBC1D4-201ENST00000377625 MYO6Q9UM54 1294 aa22.62■■□□□ 1.21
TBC1D4-201ENST00000377625 WWC2Q6AWC2 1192 aa22.62■■□□□ 1.21
TBC1D4-201ENST00000377625 NACAP1Q9BZK3 213 aa22.62■■□□□ 1.21
TBC1D4-201ENST00000377625 NBPF1Q3BBV0 1214 aa22.61■■□□□ 1.21
TBC1D4-201ENST00000377625 ZNF530Q6P9A1 599 aaPredicted RBP22.61■■□□□ 1.21
TBC1D4-201ENST00000377625 DDX54Q8TDD1 881 aaKnown RBP22.61■■□□□ 1.21
TBC1D4-201ENST00000377625 SRCIN1Q9C0H9 1055 aa22.61■■□□□ 1.21
TBC1D4-201ENST00000377625 PIP4K2AP48426 406 aaPredicted RBP22.61■■□□□ 1.21
TBC1D4-201ENST00000377625 TOM1L2Q6ZVM7 507 aa22.61■■□□□ 1.21
TBC1D4-201ENST00000377625 CABP1Q9NZU7 370 aa22.61■■□□□ 1.21
TBC1D4-201ENST00000377625 JMYQ8N9B5 988 aa22.61■■□□□ 1.21
TBC1D4-201ENST00000377625 ZNF692Q9BU19 519 aaPredicted RBP22.61■■□□□ 1.21
TBC1D4-201ENST00000377625 SYCP1Q15431 976 aa22.6■■□□□ 1.21
TBC1D4-201ENST00000377625 STK11IPQ8N1F8 1099 aa22.6■■□□□ 1.21
TBC1D4-201ENST00000377625 ZNF428Q96B54 188 aa22.6■■□□□ 1.21
TBC1D4-201ENST00000377625 STK3Q13188 491 aa22.6■■□□□ 1.21
TBC1D4-201ENST00000377625 CASKIN1Q8WXD9 1431 aa22.6■■□□□ 1.21
TBC1D4-201ENST00000377625 BCAR3O75815 825 aa22.59■■□□□ 1.21
TBC1D4-201ENST00000377625 TRIM22Q8IYM9 498 aa22.59■■□□□ 1.21
TBC1D4-201ENST00000377625 SPG7Q9UQ90 795 aa22.58■■□□□ 1.21
TBC1D4-201ENST00000377625 CCP110O43303 1012 aa22.58■■□□□ 1.21
TBC1D4-201ENST00000377625 ANKRD1Q15327 319 aa22.58■■□□□ 1.21
TBC1D4-201ENST00000377625 MYL6BP14649 208 aa22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms