RNA–Protein interactions for RNA: ENST00000377390.7

SF1-204, Transcript of splicing factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SF1, Length 3,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-204ENST00000377390 ATF7IPQ6VMQ6 1270 aa14.98□□□□□ -0.01
SF1-204ENST00000377390 CHD1O14646 1710 aa14.98□□□□□ -0.01
SF1-204ENST00000377390 POLR1AO95602 1720 aaPredicted RBP14.98□□□□□ -0.01
SF1-204ENST00000377390 GAS2L2Q8NHY3 880 aa14.98□□□□□ -0.01
SF1-204ENST00000377390 CABP1Q9NZU7 370 aa14.98□□□□□ -0.01
SF1-204ENST00000377390 ISY1Q9ULR0 285 aaKnown RBP14.98□□□□□ -0.01
SF1-204ENST00000377390 A0A0G2JS52 829 aa14.98□□□□□ -0.01
SF1-204ENST00000377390 CD2BP2O95400 341 aaKnown RBP14.98□□□□□ -0.01
SF1-204ENST00000377390 NGEFQ8N5V2 710 aa14.98□□□□□ -0.01
SF1-204ENST00000377390 ZRANB1Q9UGI0 708 aa14.98□□□□□ -0.01
SF1-204ENST00000377390 NECTIN2Q92692 538 aa14.97□□□□□ -0.01
SF1-204ENST00000377390 CDK11BP21127 795 aaKnown RBP14.97□□□□□ -0.01
SF1-204ENST00000377390 CHD1LQ86WJ1 897 aa14.97□□□□□ -0.01
SF1-204ENST00000377390 RIPK4P57078 832 aa14.97□□□□□ -0.01
SF1-204ENST00000377390 CHAMP1Q96JM3 812 aa14.97□□□□□ -0.01
SF1-204ENST00000377390 FAM135AQ9P2D6 1515 aa14.96□□□□□ -0.01
SF1-204ENST00000377390 BAG4O95429 457 aaKnown RBP14.96□□□□□ -0.01
SF1-204ENST00000377390 PTMSP20962 102 aa14.96□□□□□ -0.01
SF1-204ENST00000377390 WDR63Q8IWG1 891 aa14.96□□□□□ -0.01
SF1-204ENST00000377390 TTC37Q6PGP7 1564 aa14.96□□□□□ -0.01
SF1-204ENST00000377390 PRDM4Q9UKN5 801 aa14.95□□□□□ -0.02
SF1-204ENST00000377390 A2MP01023 1474 aa14.95□□□□□ -0.02
SF1-204ENST00000377390 OFD1O75665 1012 aa14.95□□□□□ -0.02
SF1-204ENST00000377390 RAB3GAP1Q15042 981 aa14.95□□□□□ -0.02
SF1-204ENST00000377390 RRS1Q15050 365 aaKnown RBP14.95□□□□□ -0.02
SF1-204ENST00000377390 VGLL3A8MV65 326 aa14.94□□□□□ -0.02
SF1-204ENST00000377390 JARID2Q92833 1246 aaPredicted RBP14.94□□□□□ -0.02
SF1-204ENST00000377390 NOS1P29475 1434 aa14.94□□□□□ -0.02
SF1-204ENST00000377390 SYCE3A1L190 88 aa14.94□□□□□ -0.02
SF1-204ENST00000377390 MAP7D2Q96T17 732 aa14.94□□□□□ -0.02
SF1-204ENST00000377390 CIZ1Q9ULV3 898 aaPredicted RBP14.94□□□□□ -0.02
SF1-204ENST00000377390 PLCH2O75038 1416 aa14.94□□□□□ -0.02
SF1-204ENST00000377390 PLCD3Q8N3E9 789 aa14.94□□□□□ -0.02
SF1-204ENST00000377390 NINLQ9Y2I6 1382 aa14.94□□□□□ -0.02
SF1-204ENST00000377390 SPDYE4A6NLX3 237 aa14.93□□□□□ -0.02
SF1-204ENST00000377390 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.93□□□□□ -0.026e-7■■■□□ 15.3
SF1-204ENST00000377390 PRIM1P49642 420 aaKnown RBP14.93□□□□□ -0.02
SF1-204ENST00000377390 TBC1D9Q6ZT07 1266 aa14.93□□□□□ -0.02
SF1-204ENST00000377390 CHMP4BQ9H444 224 aaKnown RBP14.93□□□□□ -0.02
SF1-204ENST00000377390 ABCC10Q5T3U5 1492 aa14.93□□□□□ -0.02
SF1-204ENST00000377390 VGFO15240 615 aaPredicted RBP14.92□□□□□ -0.02
SF1-204ENST00000377390 SMC5Q8IY18 1101 aa14.91□□□□□ -0.02
SF1-204ENST00000377390 RBSNQ9H1K0 784 aa14.91□□□□□ -0.02
SF1-204ENST00000377390 ZSCAN23Q3MJ62 389 aa14.9□□□□□ -0.02
SF1-204ENST00000377390 PKP1Q13835 747 aa14.9□□□□□ -0.02
SF1-204ENST00000377390 KLHL40Q2TBA0 621 aa14.9□□□□□ -0.02
SF1-204ENST00000377390 DCTN1Q14203 1278 aa14.9□□□□□ -0.02
SF1-204ENST00000377390 ZNF830Q96NB3 372 aaPredicted RBP14.9□□□□□ -0.02
SF1-204ENST00000377390 ASXL1Q8IXJ9 1541 aa14.9□□□□□ -0.02
SF1-204ENST00000377390 INSRP06213 1382 aa14.89□□□□□ -0.03
SF1-204ENST00000377390 NUCB2P80303 420 aa14.89□□□□□ -0.03
SF1-204ENST00000377390 SAMD9LQ8IVG5 1584 aa14.89□□□□□ -0.03
SF1-204ENST00000377390 KIAA2012Q0VF49 1180 aa14.89□□□□□ -0.03
SF1-204ENST00000377390 CASC1Q6TDU7 716 aa14.89□□□□□ -0.03
SF1-204ENST00000377390 ZNF692Q9BU19 519 aaPredicted RBP14.89□□□□□ -0.03
SF1-204ENST00000377390 GPRASP1Q5JY77 1395 aa14.88□□□□□ -0.03
SF1-204ENST00000377390 NSD3Q9BZ95 1437 aa14.88□□□□□ -0.03
SF1-204ENST00000377390 SNX21Q969T3 373 aa14.88□□□□□ -0.03
SF1-204ENST00000377390 KIF16BQ96L93 1317 aa14.88□□□□□ -0.03
SF1-204ENST00000377390 PIK3C2GO75747 1445 aa14.88□□□□□ -0.03
SF1-204ENST00000377390 WDR7Q9Y4E6 1490 aa14.87□□□□□ -0.03
SF1-204ENST00000377390 ST18O60284 1047 aa14.87□□□□□ -0.03
SF1-204ENST00000377390 TMPOP42166 694 aaKnown RBP14.87□□□□□ -0.03
SF1-204ENST00000377390 HDAC1Q13547 482 aaPredicted RBP14.87□□□□□ -0.03
SF1-204ENST00000377390 ZNF771Q7L3S4 317 aaPredicted RBP14.87□□□□□ -0.03
SF1-204ENST00000377390 CDK19Q9BWU1 502 aa14.87□□□□□ -0.03
SF1-204ENST00000377390 CDC45O75419 566 aa14.87□□□□□ -0.03
SF1-204ENST00000377390 ZGPATQ8N5A5 531 aaKnown RBP14.87□□□□□ -0.03
SF1-204ENST00000377390 PLA2R1Q13018 1463 aa14.87□□□□□ -0.03
SF1-204ENST00000377390 NUCB1Q02818 461 aa14.87□□□□□ -0.03
SF1-204ENST00000377390 GDPD2Q9HCC8 539 aa14.86□□□□□ -0.03
SF1-204ENST00000377390 ABCA8O94911 1581 aa14.86□□□□□ -0.03
SF1-204ENST00000377390 RBM25P49756 843 aaKnown RBP14.86□□□□□ -0.03
SF1-204ENST00000377390 CGNQ9P2M7 1197 aaKnown RBP14.86□□□□□ -0.03
SF1-204ENST00000377390 ADGRL2O95490 1459 aa14.86□□□□□ -0.03
SF1-204ENST00000377390 MIS18AQ9NYP9 233 aa14.86□□□□□ -0.03
SF1-204ENST00000377390 CSPP1Q1MSJ5 1256 aa14.85□□□□□ -0.03
SF1-204ENST00000377390 C16orf71Q8IYS4 520 aaPredicted RBP14.85□□□□□ -0.03
SF1-204ENST00000377390 HDGFL2Q7Z4V5 671 aaPredicted RBP14.85□□□□□ -0.03
SF1-204ENST00000377390 ZBTB40Q9NUA8 1239 aa14.85□□□□□ -0.03
SF1-204ENST00000377390 EVC2Q86UK5 1308 aa14.84□□□□□ -0.03
SF1-204ENST00000377390 NGDNQ8NEJ9 315 aaKnown RBP14.84□□□□□ -0.03
SF1-204ENST00000377390 CDC42BPAQ5VT25 1732 aa14.84□□□□□ -0.03
SF1-204ENST00000377390 ABCC2Q92887 1545 aa14.84□□□□□ -0.03
SF1-204ENST00000377390 NEK4P51957 841 aa14.84□□□□□ -0.03
SF1-204ENST00000377390 BMP2KLQ5H9B9 411 aa14.84□□□□□ -0.03
SF1-204ENST00000377390 NME9Q86XW9 330 aa14.84□□□□□ -0.03
SF1-204ENST00000377390 PPP4R3BQ5MIZ7 849 aa14.83□□□□□ -0.03
SF1-204ENST00000377390 SMAP1Q8IYB5 467 aaPredicted RBP14.83□□□□□ -0.03
SF1-204ENST00000377390 EMILIN1Q9Y6C2 1016 aa14.83□□□□□ -0.03
SF1-204ENST00000377390 PPP1R9BQ96SB3 815 aa14.83□□□□□ -0.04
SF1-204ENST00000377390 CCDC39Q9UFE4 941 aa14.83□□□□□ -0.04
SF1-204ENST00000377390 NLRP1Q9C000 1473 aa14.83□□□□□ -0.04
SF1-204ENST00000377390 SMARCA5O60264 1052 aaPredicted RBP14.83□□□□□ -0.04
SF1-204ENST00000377390 RABEP1Q15276 862 aa14.82□□□□□ -0.04
SF1-204ENST00000377390 C17orf53Q8N3J3 647 aaPredicted RBP14.82□□□□□ -0.04
SF1-204ENST00000377390 ZKSCAN5Q9Y2L8 839 aa14.82□□□□□ -0.04
SF1-204ENST00000377390 YEATS2Q9ULM3 1422 aa14.82□□□□□ -0.04
SF1-204ENST00000377390 ITSN2Q9NZM3 1697 aa14.81□□□□□ -0.04
SF1-204ENST00000377390 SLC4A10Q6U841 1118 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms