RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 TOPAZ1Q8N9V7 1692 aa28.05■■■□□ 2.08
CBWD3-204ENST00000377349 ZRANB1Q9UGI0 708 aa28.03■■■□□ 2.08
CBWD3-204ENST00000377349 PHRF1Q9P1Y6 1649 aaKnown RBP28.01■■■□□ 2.07
CBWD3-204ENST00000377349 BTG4Q9NY30 223 aa27.99■■■□□ 2.07
CBWD3-204ENST00000377349 CCDC9Q9Y3X0 531 aaKnown RBP27.99■■■□□ 2.07
CBWD3-204ENST00000377349 DEFB132Q7Z7B7 95 aa27.98■■■□□ 2.07
CBWD3-204ENST00000377349 KRT27Q7Z3Y8 459 aa27.97■■■□□ 2.07
CBWD3-204ENST00000377349 THSD7AQ9UPZ6 1657 aa27.96■■■□□ 2.07
CBWD3-204ENST00000377349 NGDNQ8NEJ9 315 aaKnown RBP27.96■■■□□ 2.07
CBWD3-204ENST00000377349 NUDT16Q96DE0 195 aaKnown RBP27.95■■■□□ 2.07
CBWD3-204ENST00000377349 FAM98CQ17RN3 349 aaKnown RBP27.92■■■□□ 2.06
CBWD3-204ENST00000377349 POLR3AO14802 1390 aaPredicted RBP27.91■■■□□ 2.06
CBWD3-204ENST00000377349 PAK3O75914 559 aaPredicted RBP27.91■■■□□ 2.06
CBWD3-204ENST00000377349 SPATA31A5Q5VU36 1347 aa27.9■■■□□ 2.06
CBWD3-204ENST00000377349 SPATA31A7Q8IWB4 1347 aa27.9■■■□□ 2.06
CBWD3-204ENST00000377349 RGPD1P0DJD0 1748 aa27.9■■■□□ 2.06
CBWD3-204ENST00000377349 CDK19Q9BWU1 502 aa27.9■■■□□ 2.06
CBWD3-204ENST00000377349 TNS1Q9HBL0 1735 aaKnown RBP27.87■■■□□ 2.05
CBWD3-204ENST00000377349 NBPF1Q3BBV0 1214 aa27.87■■■□□ 2.05
CBWD3-204ENST00000377349 KIAA0232Q92628 1395 aa27.87■■■□□ 2.05
CBWD3-204ENST00000377349 NRKQ7Z2Y5 1582 aa27.86■■■□□ 2.05
CBWD3-204ENST00000377349 PRDM11Q9NQV5 511 aa27.86■■■□□ 2.05
CBWD3-204ENST00000377349 SF3B2Q13435 895 aaKnown RBP27.85■■■□□ 2.05
CBWD3-204ENST00000377349 A0A0G2JS52 829 aa27.84■■■□□ 2.05
CBWD3-204ENST00000377349 MYT1Q01538 1121 aa27.84■■■□□ 2.05
CBWD3-204ENST00000377349 ACEP12821 1306 aa27.84■■■□□ 2.05
CBWD3-204ENST00000377349 QRICH2Q9H0J4 1663 aa27.84■■■□□ 2.05
CBWD3-204ENST00000377349 PLEKHG3A1L390 1219 aa27.83■■■□□ 2.05
CBWD3-204ENST00000377349 NBPF8Q3BBV2 869 aa27.83■■■□□ 2.05
CBWD3-204ENST00000377349 CCDC61Q9Y6R9 512 aa27.83■■■□□ 2.05
CBWD3-204ENST00000377349 LMO7Q8WWI1 1683 aa27.82■■■□□ 2.04
CBWD3-204ENST00000377349 LRP5O75197 1615 aa27.82■■■□□ 2.04
CBWD3-204ENST00000377349 CHRNA2Q15822 529 aa27.81■■■□□ 2.04
CBWD3-204ENST00000377349 SPATA31A1Q5TZJ5 1347 aa27.8■■■□□ 2.04
CBWD3-204ENST00000377349 FAM182BQ5T319 152 aa27.8■■■□□ 2.04
CBWD3-204ENST00000377349 NUTM2GQ5VZR2 741 aa27.8■■■□□ 2.04
CBWD3-204ENST00000377349 CAMTA1Q9Y6Y1 1673 aa27.78■■■□□ 2.04
CBWD3-204ENST00000377349 ZC3H6P61129 1189 aaKnown RBP27.77■■■□□ 2.04
CBWD3-204ENST00000377349 USP19O94966 1318 aa27.76■■■□□ 2.03
CBWD3-204ENST00000377349 BAG6P46379 1132 aa27.75■■■□□ 2.03
CBWD3-204ENST00000377349 DISP2A7MBM2 1401 aa27.75■■■□□ 2.03
CBWD3-204ENST00000377349 PPIP5K1Q6PFW1 1433 aa27.75■■■□□ 2.03
CBWD3-204ENST00000377349 CENPJQ9HC77 1338 aaPredicted RBP27.74■■■□□ 2.03
CBWD3-204ENST00000377349 SSH2Q76I76 1423 aa27.74■■■□□ 2.03
CBWD3-204ENST00000377349 CPDO75976 1380 aa27.74■■■□□ 2.03
CBWD3-204ENST00000377349 TRPM1Q7Z4N2 1603 aa27.73■■■□□ 2.03
CBWD3-204ENST00000377349 STRN4Q9NRL3 753 aa27.73■■■□□ 2.03
CBWD3-204ENST00000377349 EN1Q05925 392 aaPredicted RBP27.71■■■□□ 2.03
CBWD3-204ENST00000377349 ABTB2Q8N961 1025 aa27.71■■■□□ 2.03
CBWD3-204ENST00000377349 CABP2Q9NPB3 220 aa27.7■■■□□ 2.03
CBWD3-204ENST00000377349 PSDA5PKW4 1024 aaPredicted RBP27.68■■■□□ 2.02
CBWD3-204ENST00000377349 SRPK2P78362 688 aaKnown RBP27.68■■■□□ 2.02
CBWD3-204ENST00000377349 PARP4Q9UKK3 1724 aaKnown RBP27.67■■■□□ 2.02
CBWD3-204ENST00000377349 BARGINQ6ZT62 677 aa27.67■■■□□ 2.02
CBWD3-204ENST00000377349 PIK3C2AO00443 1686 aa27.67■■■□□ 2.02
CBWD3-204ENST00000377349 LARP1Q6PKG0 1096 aaKnown RBP27.66■■■□□ 2.02
CBWD3-204ENST00000377349 L3MBTL2Q969R5 705 aa27.66■■■□□ 2.02
CBWD3-204ENST00000377349 SLIT3O75094 1523 aa27.66■■■□□ 2.02
CBWD3-204ENST00000377349 COL18A1P39060 1754 aa27.66■■■□□ 2.02
CBWD3-204ENST00000377349 RREB1Q92766 1687 aa27.65■■■□□ 2.02
CBWD3-204ENST00000377349 USP6P35125 1406 aa27.65■■■□□ 2.02
CBWD3-204ENST00000377349 USP35Q9P2H5 1018 aa27.65■■■□□ 2.02
CBWD3-204ENST00000377349 BRD4O60885 1362 aaPredicted RBP27.64■■■□□ 2.02
CBWD3-204ENST00000377349 AKAP12Q02952 1782 aa27.64■■■□□ 2.02
CBWD3-204ENST00000377349 COL5A2P05997 1499 aaPredicted RBP27.64■■■□□ 2.02
CBWD3-204ENST00000377349 GCP02774 474 aa27.64■■■□□ 2.02
CBWD3-204ENST00000377349 NLRP13Q86W25 1043 aa27.63■■■□□ 2.01
CBWD3-204ENST00000377349 FAM196AQ6ZSG2 479 aa27.62■■■□□ 2.01
CBWD3-204ENST00000377349 TRIM37O94972 964 aa27.61■■■□□ 2.01
CBWD3-204ENST00000377349 EVA1CP58658 441 aa27.61■■■□□ 2.01
CBWD3-204ENST00000377349 EZH2Q15910 746 aaKnown RBP27.61■■■□□ 2.01
CBWD3-204ENST00000377349 CABP1Q9NZU7 370 aa27.61■■■□□ 2.01
CBWD3-204ENST00000377349 NUP188Q5SRE5 1749 aa27.61■■■□□ 2.01
CBWD3-204ENST00000377349 WNK3Q9BYP7 1800 aa27.6■■■□□ 2.01
CBWD3-204ENST00000377349 CAMKK2Q96RR4 588 aa27.6■■■□□ 2.01
CBWD3-204ENST00000377349 SBF2Q86WG5 1849 aa27.6■■■□□ 2.01
CBWD3-204ENST00000377349 RGPD5Q99666 1765 aa27.6■■■□□ 2.01
CBWD3-204ENST00000377349 PEAK1Q9H792 1746 aa27.59■■■□□ 2.01
CBWD3-204ENST00000377349 TCP11L2Q8N4U5 519 aa27.58■■■□□ 2.01
CBWD3-204ENST00000377349 SIN3AQ96ST3 1273 aa27.58■■■□□ 2.01
CBWD3-204ENST00000377349 R3HDM1Q15032 1099 aaKnown RBP27.56■■■□□ 2
CBWD3-204ENST00000377349 LRRC37A3O60309 1634 aa27.55■■■□□ 2
CBWD3-204ENST00000377349 THRAP3Q9Y2W1 955 aaKnown RBP27.55■■■□□ 2
CBWD3-204ENST00000377349 AATKQ6ZMQ8 1374 aa27.54■■■□□ 2
CBWD3-204ENST00000377349 CRB1P82279 1406 aa27.54■■■□□ 2
CBWD3-204ENST00000377349 PARD3Q8TEW0 1356 aa27.54■■■□□ 2
CBWD3-204ENST00000377349 NLRP6P59044 892 aa27.53■■■□□ 2
CBWD3-204ENST00000377349 PDE3BQ13370 1112 aa27.53■■■□□ 2
CBWD3-204ENST00000377349 NEUROD1Q13562 356 aa27.53■■■□□ 2
CBWD3-204ENST00000377349 EVC2Q86UK5 1308 aa27.53■■■□□ 2
CBWD3-204ENST00000377349 APBA3O96018 575 aa27.52■■■□□ 2
CBWD3-204ENST00000377349 MON2Q7Z3U7 1717 aa27.51■■□□□ 1.99
CBWD3-204ENST00000377349 ROCK2O75116 1388 aaKnown RBP27.5■■□□□ 1.99
CBWD3-204ENST00000377349 RGPD3A6NKT7 1758 aaPredicted RBP27.49■■□□□ 1.99
CBWD3-204ENST00000377349 RGPD4Q7Z3J3 1758 aa27.49■■□□□ 1.99
CBWD3-204ENST00000377349 CPSF1Q10570 1443 aaKnown RBP27.48■■□□□ 1.99
CBWD3-204ENST00000377349 NFAT5O94916 1531 aa27.46■■□□□ 1.99
CBWD3-204ENST00000377349 AXIN2Q9Y2T1 843 aa27.46■■□□□ 1.99
CBWD3-204ENST00000377349 TTC21BQ7Z4L5 1316 aa27.46■■□□□ 1.99
CBWD3-204ENST00000377349 ZBTB7CA1YPR0 619 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms