RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 ZNF692Q9BU19 519 aaPredicted RBP31.67■■■□□ 2.66
YIF1A-202ENST00000376899 MYOM1P52179 1685 aa31.66■■■□□ 2.66
YIF1A-202ENST00000376899 MARF1Q9Y4F3 1742 aaKnown RBP31.66■■■□□ 2.66
YIF1A-202ENST00000376899 NUTM2BA6NNL0 878 aaPredicted RBP31.65■■■□□ 2.66
YIF1A-202ENST00000376899 NUTM2EB1AL46 878 aaPredicted RBP31.65■■■□□ 2.66
YIF1A-202ENST00000376899 NUTM2AQ8IVF1 878 aaPredicted RBP31.65■■■□□ 2.66
YIF1A-202ENST00000376899 SLC12A5Q9H2X9 1139 aa31.65■■■□□ 2.66
YIF1A-202ENST00000376899 PAK3O75914 559 aaPredicted RBP31.64■■■□□ 2.66
YIF1A-202ENST00000376899 TMC1Q8TDI8 760 aa31.64■■■□□ 2.66
YIF1A-202ENST00000376899 KTN1Q86UP2 1357 aaKnown RBP31.61■■■□□ 2.65
YIF1A-202ENST00000376899 LMOD2Q6P5Q4 547 aa31.61■■■□□ 2.65
YIF1A-202ENST00000376899 PIK3C2AO00443 1686 aa31.6■■■□□ 2.65
YIF1A-202ENST00000376899 A0A1W2PP64 1363 aa31.59■■■□□ 2.65
YIF1A-202ENST00000376899 PHRF1Q9P1Y6 1649 aaKnown RBP31.59■■■□□ 2.65
YIF1A-202ENST00000376899 HDGFL2Q7Z4V5 671 aaPredicted RBP31.58■■■□□ 2.65
YIF1A-202ENST00000376899 TERF2IPQ9NYB0 399 aa31.58■■■□□ 2.65
YIF1A-202ENST00000376899 MEX3CQ5U5Q3 659 aaKnown RBP31.57■■■□□ 2.64
YIF1A-202ENST00000376899 ANKRD36BQ8N2N9 1353 aa31.56■■■□□ 2.64
YIF1A-202ENST00000376899 TTC21BQ7Z4L5 1316 aa31.56■■■□□ 2.64
YIF1A-202ENST00000376899 EDC4Q6P2E9 1401 aaKnown RBP31.56■■■□□ 2.64
YIF1A-202ENST00000376899 TTC21AQ8NDW8 1320 aa31.55■■■□□ 2.64
YIF1A-202ENST00000376899 CABLES1Q8TDN4 633 aa31.55■■■□□ 2.64
YIF1A-202ENST00000376899 ABTB2Q8N961 1025 aa31.54■■■□□ 2.64
YIF1A-202ENST00000376899 USP54Q70EL1 1684 aa31.54■■■□□ 2.64
YIF1A-202ENST00000376899 ADAMTS2O95450 1211 aa31.53■■■□□ 2.64
YIF1A-202ENST00000376899 PHF23Q9BUL5 403 aaPredicted RBP31.53■■■□□ 2.64
YIF1A-202ENST00000376899 USP19O94966 1318 aa31.52■■■□□ 2.64
YIF1A-202ENST00000376899 C11orf95C9JLR9 678 aaPredicted RBP31.5■■■□□ 2.63
YIF1A-202ENST00000376899 RGS17Q9UGC6 210 aaPredicted RBP31.5■■■□□ 2.63
YIF1A-202ENST00000376899 SLIT3O75094 1523 aa31.49■■■□□ 2.63
YIF1A-202ENST00000376899 NUTM2GQ5VZR2 741 aa31.48■■■□□ 2.63
YIF1A-202ENST00000376899 NLRP13Q86W25 1043 aa31.48■■■□□ 2.63
YIF1A-202ENST00000376899 HAP1P54257 671 aaPredicted RBP31.47■■■□□ 2.63
YIF1A-202ENST00000376899 C8orf37Q96NL8 207 aa31.47■■■□□ 2.63
YIF1A-202ENST00000376899 USP31Q70CQ4 1352 aa31.45■■■□□ 2.63
YIF1A-202ENST00000376899 PLEKHG5O94827 1062 aa31.45■■■□□ 2.63
YIF1A-202ENST00000376899 ZEB1P37275 1124 aaPredicted RBP31.45■■■□□ 2.63
YIF1A-202ENST00000376899 AFF2P51816 1311 aa31.45■■■□□ 2.62
YIF1A-202ENST00000376899 NLRP6P59044 892 aa31.44■■■□□ 2.62
YIF1A-202ENST00000376899 PLCH1Q4KWH8 1693 aa31.44■■■□□ 2.62
YIF1A-202ENST00000376899 FNBP4Q8N3X1 1017 aaPredicted RBP31.43■■■□□ 2.62
YIF1A-202ENST00000376899 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.42■■■□□ 2.62
YIF1A-202ENST00000376899 NWD2Q9ULI1 1742 aa31.42■■■□□ 2.62
YIF1A-202ENST00000376899 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.42■■■□□ 2.62
YIF1A-202ENST00000376899 NGLY1Q96IV0 654 aa31.42■■■□□ 2.62
YIF1A-202ENST00000376899 SLIT2O94813 1529 aa31.42■■■□□ 2.62
YIF1A-202ENST00000376899 COL14A1Q05707 1796 aaKnown RBP31.42■■■□□ 2.62
YIF1A-202ENST00000376899 KIF7Q2M1P5 1343 aa31.42■■■□□ 2.62
YIF1A-202ENST00000376899 POLR3GLQ9BT43 218 aa31.41■■■□□ 2.62
YIF1A-202ENST00000376899 ZNF772Q68DY9 489 aaPredicted RBP31.4■■■□□ 2.62
YIF1A-202ENST00000376899 NME9Q86XW9 330 aa31.39■■■□□ 2.62
YIF1A-202ENST00000376899 OVOS2A0A0J9YW53 1432 aa31.39■■■□□ 2.62
YIF1A-202ENST00000376899 OVOS2Q6IE36 1432 aa31.39■■■□□ 2.62
YIF1A-202ENST00000376899 GCP02774 474 aa31.38■■■□□ 2.61
YIF1A-202ENST00000376899 CPDO75976 1380 aa31.38■■■□□ 2.61
YIF1A-202ENST00000376899 KIF20BQ96Q89 1820 aa31.38■■■□□ 2.61
YIF1A-202ENST00000376899 BCL9LQ86UU0 1499 aa31.37■■■□□ 2.61
YIF1A-202ENST00000376899 KIAA0232Q92628 1395 aa31.36■■■□□ 2.61
YIF1A-202ENST00000376899 CARD14Q9BXL6 1004 aa31.36■■■□□ 2.61
YIF1A-202ENST00000376899 NRAPQ86VF7 1730 aa31.35■■■□□ 2.61
YIF1A-202ENST00000376899 NFAT5O94916 1531 aa31.35■■■□□ 2.61
YIF1A-202ENST00000376899 NSD3Q9BZ95 1437 aa31.35■■■□□ 2.61
YIF1A-202ENST00000376899 FAM83GA6ND36 823 aa31.35■■■□□ 2.61
YIF1A-202ENST00000376899 POTEAQ6S8J7 498 aa31.35■■■□□ 2.61
YIF1A-202ENST00000376899 ZRANB1Q9UGI0 708 aa31.35■■■□□ 2.61
YIF1A-202ENST00000376899 CCDC7Q96M83 1385 aa31.34■■■□□ 2.61
YIF1A-202ENST00000376899 USP21Q9UK80 565 aa31.33■■■□□ 2.61
YIF1A-202ENST00000376899 LMO7Q8WWI1 1683 aa31.32■■■□□ 2.6
YIF1A-202ENST00000376899 KCNH5Q8NCM2 988 aa31.32■■■□□ 2.6
YIF1A-202ENST00000376899 PRDM11Q9NQV5 511 aa31.32■■■□□ 2.6
YIF1A-202ENST00000376899 ZC3H6P61129 1189 aaKnown RBP31.31■■■□□ 2.6
YIF1A-202ENST00000376899 ATRNO75882 1429 aa31.31■■■□□ 2.6
YIF1A-202ENST00000376899 WASHC2AQ641Q2 1341 aa31.3■■■□□ 2.6
YIF1A-202ENST00000376899 FYB1O15117 783 aa31.28■■■□□ 2.6
YIF1A-202ENST00000376899 COL18A1P39060 1754 aa31.28■■■□□ 2.6
YIF1A-202ENST00000376899 UNC5CLQ8IV45 518 aa31.27■■■□□ 2.6
YIF1A-202ENST00000376899 PANK3Q9H999 370 aa31.27■■■□□ 2.6
YIF1A-202ENST00000376899 TRPC5Q9UL62 973 aaPredicted RBP31.25■■■□□ 2.59
YIF1A-202ENST00000376899 ABCC6O95255 1503 aa31.24■■■□□ 2.59
YIF1A-202ENST00000376899 CHRNA2Q15822 529 aa31.24■■■□□ 2.59
YIF1A-202ENST00000376899 COG3Q96JB2 828 aa31.24■■■□□ 2.59
YIF1A-202ENST00000376899 QTRT2Q9H974 415 aaKnown RBP31.24■■■□□ 2.59
YIF1A-202ENST00000376899 ANKRD26Q9UPS8 1709 aa31.24■■■□□ 2.59
YIF1A-202ENST00000376899 LTN1O94822 1766 aa31.23■■■□□ 2.59
YIF1A-202ENST00000376899 CAMTA1Q9Y6Y1 1673 aa31.23■■■□□ 2.59
YIF1A-202ENST00000376899 AATKQ6ZMQ8 1374 aa31.23■■■□□ 2.59
YIF1A-202ENST00000376899 ARHGEF25Q86VW2 580 aa31.23■■■□□ 2.59
YIF1A-202ENST00000376899 BTG4Q9NY30 223 aa31.23■■■□□ 2.59
YIF1A-202ENST00000376899 GGNBP2Q9H3C7 697 aa31.22■■■□□ 2.59
YIF1A-202ENST00000376899 ILDR2Q71H61 639 aa31.21■■■□□ 2.59
YIF1A-202ENST00000376899 CGNL1Q0VF96 1302 aa31.21■■■□□ 2.59
YIF1A-202ENST00000376899 SOX12O15370 315 aa31.19■■■□□ 2.58
YIF1A-202ENST00000376899 VPS72Q15906 364 aa31.18■■■□□ 2.58
YIF1A-202ENST00000376899 CDK12Q9NYV4 1490 aaPredicted RBP31.18■■■□□ 2.58
YIF1A-202ENST00000376899 GLI3P10071 1580 aa31.17■■■□□ 2.58
YIF1A-202ENST00000376899 RXRBP28702 533 aa31.17■■■□□ 2.58
YIF1A-202ENST00000376899 RBM6P78332 1123 aaKnown RBP31.17■■■□□ 2.58
YIF1A-202ENST00000376899 RGPD5Q99666 1765 aa31.16■■■□□ 2.58
YIF1A-202ENST00000376899 COL5A2P05997 1499 aaPredicted RBP31.15■■■□□ 2.58
YIF1A-202ENST00000376899 NSD2O96028 1365 aa31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms