RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 GCC1Q96CN9 775 aa13.29□□□□□ -0.28
MDC1-201ENST00000376406 TOM1L2Q6ZVM7 507 aa13.28□□□□□ -0.28
MDC1-201ENST00000376406 BECN2A8MW95 431 aa13.28□□□□□ -0.28
MDC1-201ENST00000376406 FOXD4L6Q3SYB3 417 aaPredicted RBP13.28□□□□□ -0.28
MDC1-201ENST00000376406 FOXD4L3Q6VB84 417 aaPredicted RBP13.28□□□□□ -0.28
MDC1-201ENST00000376406 VPS53Q5VIR6 699 aa13.28□□□□□ -0.28
MDC1-201ENST00000376406 MCTP1Q6DN14 999 aa13.28□□□□□ -0.28
MDC1-201ENST00000376406 GOLGA6L1Q8N7Z2 621 aa13.28□□□□□ -0.28
MDC1-201ENST00000376406 NOC3LQ8WTT2 800 aaKnown RBP13.28□□□□□ -0.28
MDC1-201ENST00000376406 TRIM29Q14134 588 aa13.27□□□□□ -0.28
MDC1-201ENST00000376406 ARID3AQ99856 593 aa13.27□□□□□ -0.28
MDC1-201ENST00000376406 PRDM11Q9NQV5 511 aa13.27□□□□□ -0.28
MDC1-201ENST00000376406 UBTFL1P0CB47 393 aaPredicted RBP13.27□□□□□ -0.29
MDC1-201ENST00000376406 SMC3Q9UQE7 1217 aa13.27□□□□□ -0.29
MDC1-201ENST00000376406 NOB1Q9ULX3 412 aaKnown RBP13.27□□□□□ -0.29
MDC1-201ENST00000376406 DUOX2Q9NRD8 1548 aa13.26□□□□□ -0.29
MDC1-201ENST00000376406 HSP90AA2PQ14568 343 aaPredicted RBP13.26□□□□□ -0.29
MDC1-201ENST00000376406 TPD52L1Q16890 204 aaPredicted RBP13.26□□□□□ -0.29
MDC1-201ENST00000376406 TPM3P06753 285 aa13.26□□□□□ -0.29
MDC1-201ENST00000376406 CNTROBQ8N137 903 aa13.26□□□□□ -0.29
MDC1-201ENST00000376406 PDZRN3Q9UPQ7 1066 aa13.26□□□□□ -0.29
MDC1-201ENST00000376406 ZNF518AQ6AHZ1 1483 aa13.26□□□□□ -0.29
MDC1-201ENST00000376406 EXOSC9Q06265 439 aaKnown RBP13.26□□□□□ -0.29
MDC1-201ENST00000376406 GNL3LQ9NVN8 582 aaKnown RBP13.26□□□□□ -0.29
MDC1-201ENST00000376406 PRKAR2BP31323 418 aa13.26□□□□□ -0.29
MDC1-201ENST00000376406 CCDC61Q9Y6R9 512 aa13.26□□□□□ -0.29
MDC1-201ENST00000376406 ADAMTS12P58397 1594 aa13.25□□□□□ -0.29
MDC1-201ENST00000376406 SLC3A2P08195 630 aaKnown RBP13.25□□□□□ -0.29
MDC1-201ENST00000376406 CREBRFQ8IUR6 639 aa13.25□□□□□ -0.29
MDC1-201ENST00000376406 CCDC47Q96A33 483 aaKnown RBP13.25□□□□□ -0.29
MDC1-201ENST00000376406 EIF4G3O43432 1585 aaKnown RBP13.25□□□□□ -0.29
MDC1-201ENST00000376406 TPM2P07951 284 aa13.25□□□□□ -0.29
MDC1-201ENST00000376406 STRN4Q9NRL3 753 aa13.25□□□□□ -0.29
MDC1-201ENST00000376406 HOOK1Q9UJC3 728 aaKnown RBP13.25□□□□□ -0.29
MDC1-201ENST00000376406 GNAI3P08754 354 aa13.25□□□□□ -0.29
MDC1-201ENST00000376406 ERC1Q8IUD2 1116 aa13.25□□□□□ -0.29
MDC1-201ENST00000376406 CABP4P57796 275 aa13.24□□□□□ -0.29
MDC1-201ENST00000376406 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.24□□□□□ -0.29
MDC1-201ENST00000376406 TWISTNBQ3B726 338 aaPredicted RBP13.24□□□□□ -0.29
MDC1-201ENST00000376406 CEP89Q96ST8 783 aa13.24□□□□□ -0.29
MDC1-201ENST00000376406 HIP1O00291 1037 aa13.23□□□□□ -0.29
MDC1-201ENST00000376406 BCAR3O75815 825 aa13.23□□□□□ -0.29
MDC1-201ENST00000376406 APPP05067 770 aa13.23□□□□□ -0.29
MDC1-201ENST00000376406 TPM1P09493 284 aa13.23□□□□□ -0.29
MDC1-201ENST00000376406 PSMA5P28066 241 aa13.23□□□□□ -0.29
MDC1-201ENST00000376406 RPRD2Q5VT52 1461 aaKnown RBP13.23□□□□□ -0.29
MDC1-201ENST00000376406 TSR1Q2NL82 804 aaKnown RBP13.23□□□□□ -0.29
MDC1-201ENST00000376406 BACH2Q9BYV9 841 aa13.23□□□□□ -0.29
MDC1-201ENST00000376406 WDR62O43379 1518 aa13.23□□□□□ -0.29
MDC1-201ENST00000376406 WDR7Q9Y4E6 1490 aa13.23□□□□□ -0.29
MDC1-201ENST00000376406 NCOA1Q15788 1441 aa13.23□□□□□ -0.29
MDC1-201ENST00000376406 TBC1D2BQ9UPU7 963 aa13.23□□□□□ -0.29
MDC1-201ENST00000376406 ZNF652Q9Y2D9 606 aa13.23□□□□□ -0.29
MDC1-201ENST00000376406 MCM2P49736 904 aa13.22□□□□□ -0.29
MDC1-201ENST00000376406 CPLX1O14810 134 aa13.22□□□□□ -0.29
MDC1-201ENST00000376406 MRE11P49959 708 aa13.22□□□□□ -0.29
MDC1-201ENST00000376406 SLC12A5Q9H2X9 1139 aa13.22□□□□□ -0.29
MDC1-201ENST00000376406 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.22□□□□□ -0.29
MDC1-201ENST00000376406 NSD3Q9BZ95 1437 aa13.22□□□□□ -0.29
MDC1-201ENST00000376406 CADPS2Q86UW7 1296 aa13.22□□□□□ -0.29
MDC1-201ENST00000376406 FBXW7Q969H0 707 aa13.22□□□□□ -0.29
MDC1-201ENST00000376406 MVPQ14764 893 aaKnown RBP13.22□□□□□ -0.29
MDC1-201ENST00000376406 BICD2Q8TD16 824 aa13.22□□□□□ -0.29
MDC1-201ENST00000376406 LETM1O95202 739 aaPredicted RBP13.21□□□□□ -0.29
MDC1-201ENST00000376406 ZNF608Q9ULD9 1512 aaPredicted RBP13.21□□□□□ -0.29
MDC1-201ENST00000376406 RABEP1Q15276 862 aa13.21□□□□□ -0.29
MDC1-201ENST00000376406 KLHL34Q8N239 644 aa13.21□□□□□ -0.29
MDC1-201ENST00000376406 UGGT2Q9NYU1 1516 aa13.21□□□□□ -0.29
MDC1-201ENST00000376406 SASS6Q6UVJ0 657 aa13.21□□□□□ -0.3
MDC1-201ENST00000376406 GNAI2P04899 355 aa13.2□□□□□ -0.3
MDC1-201ENST00000376406 PIP4K2BP78356 416 aa13.2□□□□□ -0.3
MDC1-201ENST00000376406 CCDC184Q52MB2 194 aa13.2□□□□□ -0.3
MDC1-201ENST00000376406 VPS37CA5D8V6 355 aaPredicted RBP13.2□□□□□ -0.3
MDC1-201ENST00000376406 XBP1P17861 261 aa13.2□□□□□ -0.3
MDC1-201ENST00000376406 CCT4P50991 539 aaKnown RBP13.2□□□□□ -0.3
MDC1-201ENST00000376406 ZNF428Q96B54 188 aa13.2□□□□□ -0.3
MDC1-201ENST00000376406 DNAJC5BQ9UF47 199 aa13.2□□□□□ -0.3
MDC1-201ENST00000376406 MYO5CQ9NQX4 1742 aa13.2□□□□□ -0.3
MDC1-201ENST00000376406 KIAA0556O60303 1618 aa13.2□□□□□ -0.3
MDC1-201ENST00000376406 STARD3NLO95772 234 aa13.2□□□□□ -0.3
MDC1-201ENST00000376406 TSR2Q969E8 191 aaKnown RBP13.2□□□□□ -0.3
MDC1-201ENST00000376406 ASXL2Q76L83 1435 aa13.2□□□□□ -0.3
MDC1-201ENST00000376406 EIF2AK4Q9P2K8 1649 aaKnown RBP13.19□□□□□ -0.3
MDC1-201ENST00000376406 NUTM2BA6NNL0 878 aaPredicted RBP13.19□□□□□ -0.3
MDC1-201ENST00000376406 NUTM2EB1AL46 878 aaPredicted RBP13.19□□□□□ -0.3
MDC1-201ENST00000376406 NUTM2AQ8IVF1 878 aaPredicted RBP13.19□□□□□ -0.3
MDC1-201ENST00000376406 NKTRP30414 1462 aaKnown RBP13.19□□□□□ -0.3
MDC1-201ENST00000376406 MSH6P52701 1360 aa13.19□□□□□ -0.3
MDC1-201ENST00000376406 NUTM2GQ5VZR2 741 aa13.19□□□□□ -0.3
MDC1-201ENST00000376406 ATF7IPQ6VMQ6 1270 aa13.19□□□□□ -0.3
MDC1-201ENST00000376406 KDM5BQ9UGL1 1544 aa13.19□□□□□ -0.3
MDC1-201ENST00000376406 TRAK2O60296 914 aa13.19□□□□□ -0.3
MDC1-201ENST00000376406 SLFN5Q08AF3 891 aa13.19□□□□□ -0.3
MDC1-201ENST00000376406 SART3Q15020 963 aaKnown RBP13.19□□□□□ -0.3
MDC1-201ENST00000376406 CCDC43Q96MW1 224 aaKnown RBP13.18□□□□□ -0.3
MDC1-201ENST00000376406 SLC26A8Q96RN1 970 aa13.18□□□□□ -0.3
MDC1-201ENST00000376406 BRMS1Q9HCU9 246 aa13.18□□□□□ -0.3
MDC1-201ENST00000376406 CABP1Q9NZU7 370 aa13.18□□□□□ -0.3
MDC1-201ENST00000376406 CCDC39Q9UFE4 941 aa13.18□□□□□ -0.3
MDC1-201ENST00000376406 NASPP49321 788 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms