RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 EDC4Q6P2E9 1401 aaKnown RBP14.26□□□□□ -0.13
PDPN-203ENST00000376061 RALBP1Q15311 655 aa14.26□□□□□ -0.13
PDPN-203ENST00000376061 KIF1AQ12756 1690 aa14.26□□□□□ -0.13
PDPN-203ENST00000376061 NSD2O96028 1365 aa14.26□□□□□ -0.13
PDPN-203ENST00000376061 PLEKHG3A1L390 1219 aa14.25□□□□□ -0.13
PDPN-203ENST00000376061 CGNL1Q0VF96 1302 aa14.25□□□□□ -0.13
PDPN-203ENST00000376061 POLR3AO14802 1390 aaPredicted RBP14.25□□□□□ -0.13
PDPN-203ENST00000376061 MYBBP1AQ9BQG0 1328 aaKnown RBP14.24□□□□□ -0.13
PDPN-203ENST00000376061 USP6P35125 1406 aa14.24□□□□□ -0.13
PDPN-203ENST00000376061 MST1RQ04912 1400 aa14.24□□□□□ -0.13
PDPN-203ENST00000376061 LTBP4Q8N2S1 1624 aa14.23□□□□□ -0.13
PDPN-203ENST00000376061 C19orf44Q9H6X5 657 aa14.22□□□□□ -0.13
PDPN-203ENST00000376061 ACEP12821 1306 aa14.22□□□□□ -0.13
PDPN-203ENST00000376061 MSH6P52701 1360 aa14.22□□□□□ -0.13
PDPN-203ENST00000376061 C1orf167Q5SNV9 1468 aa14.22□□□□□ -0.13
PDPN-203ENST00000376061 SSH2Q76I76 1423 aa14.21□□□□□ -0.13
PDPN-203ENST00000376061 PIK3C2AO00443 1686 aa14.21□□□□□ -0.13
PDPN-203ENST00000376061 USP54Q70EL1 1684 aa14.21□□□□□ -0.13
PDPN-203ENST00000376061 CCDC184Q52MB2 194 aa14.21□□□□□ -0.14
PDPN-203ENST00000376061 PMFBP1Q8TBY8 1022 aa14.2□□□□□ -0.14
PDPN-203ENST00000376061 ZNF692Q9BU19 519 aaPredicted RBP14.2□□□□□ -0.14
PDPN-203ENST00000376061 BRD4O60885 1362 aaPredicted RBP14.2□□□□□ -0.14
PDPN-203ENST00000376061 TRPM3Q9HCF6 1732 aaPredicted RBP14.19□□□□□ -0.14
PDPN-203ENST00000376061 MARF1Q9Y4F3 1742 aaKnown RBP14.19□□□□□ -0.14
PDPN-203ENST00000376061 NLRP13Q86W25 1043 aa14.19□□□□□ -0.14
PDPN-203ENST00000376061 RTN4Q9NQC3 1192 aaKnown RBP14.19□□□□□ -0.14
PDPN-203ENST00000376061 PHF8Q9UPP1 1060 aa14.19□□□□□ -0.14
PDPN-203ENST00000376061 FYB1O15117 783 aa14.18□□□□□ -0.14
PDPN-203ENST00000376061 ATF3P18847 181 aa14.18□□□□□ -0.14
PDPN-203ENST00000376061 NGDNQ8NEJ9 315 aaKnown RBP14.18□□□□□ -0.14
PDPN-203ENST00000376061 MRS2Q9HD23 443 aa14.18□□□□□ -0.14
PDPN-203ENST00000376061 PPP2R1AP30153 589 aa14.17□□□□□ -0.14
PDPN-203ENST00000376061 CADPS2Q86UW7 1296 aa14.17□□□□□ -0.14
PDPN-203ENST00000376061 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.17□□□□□ -0.14
PDPN-203ENST00000376061 GGNBP2Q9H3C7 697 aa14.17□□□□□ -0.14
PDPN-203ENST00000376061 OVOS2A0A0J9YW53 1432 aa14.16□□□□□ -0.14
PDPN-203ENST00000376061 OVOS2Q6IE36 1432 aa14.16□□□□□ -0.14
PDPN-203ENST00000376061 TTC21BQ7Z4L5 1316 aa14.16□□□□□ -0.14
PDPN-203ENST00000376061 ESCO1Q5FWF5 840 aa14.16□□□□□ -0.14
PDPN-203ENST00000376061 MORC1Q86VD1 984 aa14.16□□□□□ -0.14
PDPN-203ENST00000376061 NME9Q86XW9 330 aa14.16□□□□□ -0.14
PDPN-203ENST00000376061 ORAI2Q96SN7 254 aa14.15□□□□□ -0.14
PDPN-203ENST00000376061 TTC21AQ8NDW8 1320 aa14.14□□□□□ -0.15
PDPN-203ENST00000376061 SHPRHQ149N8 1683 aa14.14□□□□□ -0.15
PDPN-203ENST00000376061 RBM42Q9BTD8 480 aaKnown RBP14.13□□□□□ -0.15
PDPN-203ENST00000376061 ALS2Q96Q42 1657 aa14.13□□□□□ -0.15
PDPN-203ENST00000376061 MAP2P11137 1827 aaKnown RBP14.13□□□□□ -0.15
PDPN-203ENST00000376061 TNNT2P45379 298 aaPredicted RBP14.12□□□□□ -0.15
PDPN-203ENST00000376061 ZRANB1Q9UGI0 708 aa14.12□□□□□ -0.15
PDPN-203ENST00000376061 NHSL1Q5SYE7 1610 aa14.11□□□□□ -0.15
PDPN-203ENST00000376061 USP31Q70CQ4 1352 aa14.11□□□□□ -0.15
PDPN-203ENST00000376061 SMG6Q86US8 1419 aaKnown RBP14.1□□□□□ -0.15
PDPN-203ENST00000376061 YTHDC1Q96MU7 727 aaKnown RBP14.1□□□□□ -0.15
PDPN-203ENST00000376061 COL3A1P02461 1466 aaPredicted RBP14.1□□□□□ -0.15
PDPN-203ENST00000376061 PXDNQ92626 1479 aa14.1□□□□□ -0.15
PDPN-203ENST00000376061 COG3Q96JB2 828 aa14.09□□□□□ -0.15
PDPN-203ENST00000376061 FOXO3O43524 673 aa14.09□□□□□ -0.15
PDPN-203ENST00000376061 SAMD1Q6SPF0 538 aaPredicted RBP14.09□□□□□ -0.15
PDPN-203ENST00000376061 PNISRQ8TF01 805 aaKnown RBP14.09□□□□□ -0.15
PDPN-203ENST00000376061 AATKQ6ZMQ8 1374 aa14.08□□□□□ -0.15
PDPN-203ENST00000376061 PEAK1Q9H792 1746 aa14.08□□□□□ -0.16
PDPN-203ENST00000376061 PSME1Q06323 249 aa14.08□□□□□ -0.16
PDPN-203ENST00000376061 CDK12Q9NYV4 1490 aaPredicted RBP14.08□□□□□ -0.16
PDPN-203ENST00000376061 ROBO1Q9Y6N7 1651 aa14.07□□□□□ -0.16
PDPN-203ENST00000376061 CRYBG1Q9Y4K1 1723 aa14.07□□□□□ -0.16
PDPN-203ENST00000376061 LTN1O94822 1766 aa14.07□□□□□ -0.16
PDPN-203ENST00000376061 XPCQ01831 940 aaPredicted RBP14.07□□□□□ -0.16
PDPN-203ENST00000376061 BRINP3Q76B58 766 aa14.07□□□□□ -0.16
PDPN-203ENST00000376061 FAM9BQ8IZU0 186 aa14.07□□□□□ -0.16
PDPN-203ENST00000376061 SLAIN2Q9P270 581 aa14.07□□□□□ -0.16
PDPN-203ENST00000376061 SLIT3O75094 1523 aa14.06□□□□□ -0.16
PDPN-203ENST00000376061 NFAT5O94916 1531 aa14.06□□□□□ -0.16
PDPN-203ENST00000376061 NPHP3Q7Z494 1330 aa14.06□□□□□ -0.16
PDPN-203ENST00000376061 PAK3O75914 559 aaPredicted RBP14.06□□□□□ -0.16
PDPN-203ENST00000376061 MTHFSP49914 203 aa14.06□□□□□ -0.16
PDPN-203ENST00000376061 CHRDL2Q6WN34 429 aa14.06□□□□□ -0.16
PDPN-203ENST00000376061 PHRF1Q9P1Y6 1649 aaKnown RBP14.06□□□□□ -0.16
PDPN-203ENST00000376061 SBNO1A3KN83 1393 aa14.05□□□□□ -0.16
PDPN-203ENST00000376061 KRT28Q7Z3Y7 464 aa14.05□□□□□ -0.16
PDPN-203ENST00000376061 MED1Q15648 1581 aaPredicted RBP14.04□□□□□ -0.16
PDPN-203ENST00000376061 ABTB2Q8N961 1025 aa14.04□□□□□ -0.16
PDPN-203ENST00000376061 DDX17Q92841 729 aaKnown RBP14.04□□□□□ -0.16
PDPN-203ENST00000376061 BLMP54132 1417 aaPredicted RBP14.04□□□□□ -0.16
PDPN-203ENST00000376061 TNS3Q68CZ2 1445 aa14.04□□□□□ -0.16
PDPN-203ENST00000376061 AHDC1Q5TGY3 1603 aaPredicted RBP14.03□□□□□ -0.16
PDPN-203ENST00000376061 FBLN1P23142 703 aa14.03□□□□□ -0.16
PDPN-203ENST00000376061 NLRP6P59044 892 aa14.03□□□□□ -0.16
PDPN-203ENST00000376061 NUTM2GQ5VZR2 741 aa14.03□□□□□ -0.16
PDPN-203ENST00000376061 ABCA3Q99758 1704 aa14.03□□□□□ -0.16
PDPN-203ENST00000376061 POLKQ9UBT6 870 aa14.03□□□□□ -0.16
PDPN-203ENST00000376061 IQSEC2Q5JU85 1478 aa14.03□□□□□ -0.16
PDPN-203ENST00000376061 INSRP06213 1382 aa14.02□□□□□ -0.16
PDPN-203ENST00000376061 PNPLA6Q8IY17 1366 aa14.02□□□□□ -0.16
PDPN-203ENST00000376061 CFAP53Q96M91 514 aa14.02□□□□□ -0.17
PDPN-203ENST00000376061 EMILIN1Q9Y6C2 1016 aa14.01□□□□□ -0.17
PDPN-203ENST00000376061 USP19O94966 1318 aa14.01□□□□□ -0.17
PDPN-203ENST00000376061 RRS1Q15050 365 aaKnown RBP14□□□□□ -0.17
PDPN-203ENST00000376061 WDR43Q15061 677 aaKnown RBP eCLIP14□□□□□ -0.17
PDPN-203ENST00000376061 SOS2Q07890 1332 aaPredicted RBP13.99□□□□□ -0.17
PDPN-203ENST00000376061 SPATA31A3Q5VYP0 1347 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms