RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 CFAP53Q96M91 514 aa14.86□□□□□ -0.03
PDPN-202ENST00000376057 ACEP12821 1306 aa14.86□□□□□ -0.03
PDPN-202ENST00000376057 USP31Q70CQ4 1352 aa14.86□□□□□ -0.03
PDPN-202ENST00000376057 WDR43Q15061 677 aaKnown RBP eCLIP14.85□□□□□ -0.03
PDPN-202ENST00000376057 STRCP1A6NGW2 1772 aa14.85□□□□□ -0.03
PDPN-202ENST00000376057 OVOS2A0A0J9YW53 1432 aa14.84□□□□□ -0.03
PDPN-202ENST00000376057 OVOS2Q6IE36 1432 aa14.84□□□□□ -0.03
PDPN-202ENST00000376057 ADAMTS8Q9UP79 889 aa14.84□□□□□ -0.03
PDPN-202ENST00000376057 TTC21BQ7Z4L5 1316 aa14.84□□□□□ -0.03
PDPN-202ENST00000376057 KIF1AQ12756 1690 aa14.83□□□□□ -0.03
PDPN-202ENST00000376057 MTHFSP49914 203 aa14.83□□□□□ -0.04
PDPN-202ENST00000376057 GGNBP2Q9H3C7 697 aa14.83□□□□□ -0.04
PDPN-202ENST00000376057 CDK12Q9NYV4 1490 aaPredicted RBP14.83□□□□□ -0.04
PDPN-202ENST00000376057 MAP2P11137 1827 aaKnown RBP14.82□□□□□ -0.04
PDPN-202ENST00000376057 MST1RQ04912 1400 aa14.8□□□□□ -0.04
PDPN-202ENST00000376057 PIK3C2AO00443 1686 aa14.8□□□□□ -0.04
PDPN-202ENST00000376057 MARF1Q9Y4F3 1742 aaKnown RBP14.8□□□□□ -0.04
PDPN-202ENST00000376057 COG3Q96JB2 828 aa14.79□□□□□ -0.04
PDPN-202ENST00000376057 IQSEC2Q5JU85 1478 aa14.79□□□□□ -0.04
PDPN-202ENST00000376057 ZNF521Q96K83 1311 aa14.78□□□□□ -0.04
PDPN-202ENST00000376057 C19orf44Q9H6X5 657 aa14.78□□□□□ -0.04
PDPN-202ENST00000376057 GTF3C3Q9Y5Q9 886 aa14.78□□□□□ -0.04
PDPN-202ENST00000376057 NME9Q86XW9 330 aa14.78□□□□□ -0.04
PDPN-202ENST00000376057 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.78□□□□□ -0.04
PDPN-202ENST00000376057 KIF24Q5T7B8 1368 aa14.77□□□□□ -0.04
PDPN-202ENST00000376057 POLKQ9UBT6 870 aa14.77□□□□□ -0.04
PDPN-202ENST00000376057 XIRP1Q702N8 1843 aaKnown RBP14.77□□□□□ -0.05
PDPN-202ENST00000376057 NUDCQ9Y266 331 aa14.77□□□□□ -0.05
PDPN-202ENST00000376057 PROSER2Q86WR7 435 aaPredicted RBP14.76□□□□□ -0.05
PDPN-202ENST00000376057 PHF8Q9UPP1 1060 aa14.76□□□□□ -0.05
PDPN-202ENST00000376057 NGDNQ8NEJ9 315 aaKnown RBP14.75□□□□□ -0.05
PDPN-202ENST00000376057 RUNDC1Q96C34 613 aa14.75□□□□□ -0.05
PDPN-202ENST00000376057 PNNQ9H307 717 aaKnown RBP14.75□□□□□ -0.05
PDPN-202ENST00000376057 TRPM3Q9HCF6 1732 aaPredicted RBP14.75□□□□□ -0.05
PDPN-202ENST00000376057 C1orf167Q5SNV9 1468 aa14.75□□□□□ -0.05
PDPN-202ENST00000376057 PHRF1Q9P1Y6 1649 aaKnown RBP14.75□□□□□ -0.05
PDPN-202ENST00000376057 TNNT2P45379 298 aaPredicted RBP14.74□□□□□ -0.05
PDPN-202ENST00000376057 CCDC27Q2M243 656 aa14.74□□□□□ -0.05
PDPN-202ENST00000376057 PHF23Q9BUL5 403 aaPredicted RBP14.74□□□□□ -0.05
PDPN-202ENST00000376057 MYT1Q01538 1121 aa14.73□□□□□ -0.05
PDPN-202ENST00000376057 TMEM94Q12767 1356 aa14.73□□□□□ -0.05
PDPN-202ENST00000376057 DIAPH1O60610 1272 aaKnown RBP14.73□□□□□ -0.05
PDPN-202ENST00000376057 DMRT2Q9Y5R5 561 aa14.73□□□□□ -0.05
PDPN-202ENST00000376057 RNF123Q5XPI4 1314 aa14.72□□□□□ -0.05
PDPN-202ENST00000376057 HSPA2P54652 639 aa14.72□□□□□ -0.05
PDPN-202ENST00000376057 RGPD1P0DJD0 1748 aa14.72□□□□□ -0.05
PDPN-202ENST00000376057 PMFBP1Q8TBY8 1022 aa14.71□□□□□ -0.05
PDPN-202ENST00000376057 PEAK1Q9H792 1746 aa14.71□□□□□ -0.05
PDPN-202ENST00000376057 ERICH6BQ5W0A0 696 aa14.71□□□□□ -0.05
PDPN-202ENST00000376057 PLEKHF1Q96S99 279 aa14.71□□□□□ -0.05
PDPN-202ENST00000376057 TRMT2AQ8IZ69 625 aaKnown RBP14.7□□□□□ -0.06
PDPN-202ENST00000376057 NUTM2FA1L443 756 aa14.7□□□□□ -0.06
PDPN-202ENST00000376057 FCHSD2O94868 740 aa14.7□□□□□ -0.06
PDPN-202ENST00000376057 SLIT3O75094 1523 aa14.7□□□□□ -0.06
PDPN-202ENST00000376057 IL13P35225 146 aa14.7□□□□□ -0.06
PDPN-202ENST00000376057 ZRANB1Q9UGI0 708 aa14.7□□□□□ -0.06
PDPN-202ENST00000376057 CADPS2Q86UW7 1296 aa14.69□□□□□ -0.06
PDPN-202ENST00000376057 ALS2Q96Q42 1657 aa14.69□□□□□ -0.06
PDPN-202ENST00000376057 SBNO1A3KN83 1393 aa14.69□□□□□ -0.06
PDPN-202ENST00000376057 RTL1A6NKG5 1358 aa14.68□□□□□ -0.06
PDPN-202ENST00000376057 MSH6P52701 1360 aa14.68□□□□□ -0.06
PDPN-202ENST00000376057 NFAT5O94916 1531 aa14.67□□□□□ -0.06
PDPN-202ENST00000376057 C14orf37Q86TY3 774 aa14.67□□□□□ -0.06
PDPN-202ENST00000376057 APAF1O14727 1248 aa14.67□□□□□ -0.06
PDPN-202ENST00000376057 ESCO1Q5FWF5 840 aa14.67□□□□□ -0.06
PDPN-202ENST00000376057 WDR63Q8IWG1 891 aa14.67□□□□□ -0.06
PDPN-202ENST00000376057 U2AF1L5P0DN76 240 aaPredicted RBP14.66□□□□□ -0.06
PDPN-202ENST00000376057 ATF3P18847 181 aa14.66□□□□□ -0.06
PDPN-202ENST00000376057 U2AF1Q01081 240 aaKnown RBP eCLIP14.66□□□□□ -0.06
PDPN-202ENST00000376057 GOLGA2Q08379 1002 aa14.66□□□□□ -0.06
PDPN-202ENST00000376057 EMILIN1Q9Y6C2 1016 aa14.66□□□□□ -0.06
PDPN-202ENST00000376057 FLT4P35916 1363 aa14.66□□□□□ -0.06
PDPN-202ENST00000376057 SLFN5Q08AF3 891 aa14.65□□□□□ -0.06
PDPN-202ENST00000376057 PSME1Q06323 249 aa14.65□□□□□ -0.06
PDPN-202ENST00000376057 CCDC146Q8IYE0 955 aa14.65□□□□□ -0.06
PDPN-202ENST00000376057 TCP11L2Q8N4U5 519 aa14.65□□□□□ -0.06
PDPN-202ENST00000376057 RSPH6AQ9H0K4 717 aa14.65□□□□□ -0.06
PDPN-202ENST00000376057 E9PSI1 815 aa14.64□□□□□ -0.07
PDPN-202ENST00000376057 WWC1Q8IX03 1113 aa14.64□□□□□ -0.07
PDPN-202ENST00000376057 USP19O94966 1318 aa14.64□□□□□ -0.07
PDPN-202ENST00000376057 ABCC6O95255 1503 aa14.63□□□□□ -0.07
PDPN-202ENST00000376057 KCNH5Q8NCM2 988 aa14.63□□□□□ -0.07
PDPN-202ENST00000376057 ARHGEF10O15013 1369 aa14.63□□□□□ -0.07
PDPN-202ENST00000376057 LTN1O94822 1766 aa14.63□□□□□ -0.07
PDPN-202ENST00000376057 NEFLP07196 543 aa14.63□□□□□ -0.07
PDPN-202ENST00000376057 NLRP6P59044 892 aa14.63□□□□□ -0.07
PDPN-202ENST00000376057 DUSP27Q5VZP5 1158 aa14.63□□□□□ -0.07
PDPN-202ENST00000376057 ABTB2Q8N961 1025 aa14.63□□□□□ -0.07
PDPN-202ENST00000376057 RBM33Q96EV2 1170 aaKnown RBP14.63□□□□□ -0.07
PDPN-202ENST00000376057 ORAI2Q96SN7 254 aa14.63□□□□□ -0.07
PDPN-202ENST00000376057 SUPT16HQ9Y5B9 1047 aaKnown RBP14.63□□□□□ -0.07
PDPN-202ENST00000376057 MED1Q15648 1581 aaPredicted RBP14.63□□□□□ -0.07
PDPN-202ENST00000376057 IL16Q14005 1332 aa14.62□□□□□ -0.07
PDPN-202ENST00000376057 MAP3K19Q56UN5 1328 aa14.62□□□□□ -0.07
PDPN-202ENST00000376057 PXDNQ92626 1479 aa14.61□□□□□ -0.07
PDPN-202ENST00000376057 RRS1Q15050 365 aaKnown RBP14.61□□□□□ -0.07
PDPN-202ENST00000376057 U2SURPO15042 1029 aaKnown RBP14.61□□□□□ -0.07
PDPN-202ENST00000376057 CRYBG1Q9Y4K1 1723 aa14.6□□□□□ -0.07
PDPN-202ENST00000376057 KDRP35968 1356 aa14.6□□□□□ -0.07
PDPN-202ENST00000376057 EIF4A2Q14240 407 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms